RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 FNBP4Q8N3X1 1017 aaPredicted RBP31.61■■■□□ 2.65
CKLF-206ENST00000526149 ABCA3Q99758 1704 aa31.58■■■□□ 2.65
CKLF-206ENST00000526149 MARF1Q9Y4F3 1742 aaKnown RBP31.58■■■□□ 2.65
CKLF-206ENST00000526149 USP6P35125 1406 aa31.57■■■□□ 2.64
CKLF-206ENST00000526149 HAP1P54257 671 aaPredicted RBP31.55■■■□□ 2.64
CKLF-206ENST00000526149 PUS7Q96PZ0 661 aaKnown RBP31.55■■■□□ 2.64
CKLF-206ENST00000526149 SSH2Q76I76 1423 aa31.55■■■□□ 2.64
CKLF-206ENST00000526149 NUTM2GQ5VZR2 741 aa31.54■■■□□ 2.64
CKLF-206ENST00000526149 USP21Q9UK80 565 aa31.54■■■□□ 2.64
CKLF-206ENST00000526149 BRD4O60885 1362 aaPredicted RBP31.54■■■□□ 2.64
CKLF-206ENST00000526149 CRYBG1Q9Y4K1 1723 aa31.53■■■□□ 2.64
CKLF-206ENST00000526149 CPSF1Q10570 1443 aaKnown RBP31.53■■■□□ 2.64
CKLF-206ENST00000526149 SOCS7O14512 581 aa31.53■■■□□ 2.64
CKLF-206ENST00000526149 QTRT2Q9H974 415 aaKnown RBP31.53■■■□□ 2.64
CKLF-206ENST00000526149 BCL9LQ86UU0 1499 aa31.52■■■□□ 2.64
CKLF-206ENST00000526149 ABTB2Q8N961 1025 aa31.51■■■□□ 2.63
CKLF-206ENST00000526149 SLIT2O94813 1529 aa31.5■■■□□ 2.63
CKLF-206ENST00000526149 ZNF692Q9BU19 519 aaPredicted RBP31.5■■■□□ 2.63
CKLF-206ENST00000526149 SLC12A5Q9H2X9 1139 aa31.5■■■□□ 2.63
CKLF-206ENST00000526149 CD163L1Q9NR16 1453 aa31.5■■■□□ 2.63
CKLF-206ENST00000526149 FAM83GA6ND36 823 aa31.49■■■□□ 2.63
CKLF-206ENST00000526149 SLC24A1O60721 1099 aa31.49■■■□□ 2.63
CKLF-206ENST00000526149 RXRBP28702 533 aa31.48■■■□□ 2.63
CKLF-206ENST00000526149 TMC1Q8TDI8 760 aa31.47■■■□□ 2.63
CKLF-206ENST00000526149 AKAP12Q02952 1782 aa31.47■■■□□ 2.63
CKLF-206ENST00000526149 ATRNO75882 1429 aa31.46■■■□□ 2.63
CKLF-206ENST00000526149 USP19O94966 1318 aa31.46■■■□□ 2.63
CKLF-206ENST00000526149 TRPC5Q9UL62 973 aaPredicted RBP31.45■■■□□ 2.63
CKLF-206ENST00000526149 TTC21BQ7Z4L5 1316 aa31.45■■■□□ 2.62
CKLF-206ENST00000526149 TMF1P82094 1093 aa31.44■■■□□ 2.62
CKLF-206ENST00000526149 KTN1Q86UP2 1357 aaKnown RBP31.43■■■□□ 2.62
CKLF-206ENST00000526149 PHRF1Q9P1Y6 1649 aaKnown RBP31.43■■■□□ 2.62
CKLF-206ENST00000526149 RBM6P78332 1123 aaKnown RBP31.43■■■□□ 2.62
CKLF-206ENST00000526149 NLRP13Q86W25 1043 aa31.43■■■□□ 2.62
CKLF-206ENST00000526149 UNC5CLQ8IV45 518 aa31.43■■■□□ 2.62
CKLF-206ENST00000526149 NRKQ7Z2Y5 1582 aa31.4■■■□□ 2.62
CKLF-206ENST00000526149 PIK3C2AO00443 1686 aa31.39■■■□□ 2.62
CKLF-206ENST00000526149 PLCH1Q4KWH8 1693 aa31.39■■■□□ 2.62
CKLF-206ENST00000526149 NLRP6P59044 892 aa31.39■■■□□ 2.62
CKLF-206ENST00000526149 MON2Q7Z3U7 1717 aa31.38■■■□□ 2.61
CKLF-206ENST00000526149 ZC3H6P61129 1189 aaKnown RBP31.38■■■□□ 2.61
CKLF-206ENST00000526149 TTC21AQ8NDW8 1320 aa31.38■■■□□ 2.61
CKLF-206ENST00000526149 KIAA0232Q92628 1395 aa31.38■■■□□ 2.61
CKLF-206ENST00000526149 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.38■■■□□ 2.61
CKLF-206ENST00000526149 HSPA5P11021 654 aaKnown RBP31.37■■■□□ 2.61
CKLF-206ENST00000526149 A0A1W2PP64 1363 aa31.37■■■□□ 2.61
CKLF-206ENST00000526149 CDK12Q9NYV4 1490 aaPredicted RBP31.37■■■□□ 2.61
CKLF-206ENST00000526149 GCP02774 474 aa31.36■■■□□ 2.61
CKLF-206ENST00000526149 HDGFL2Q7Z4V5 671 aaPredicted RBP31.36■■■□□ 2.61
CKLF-206ENST00000526149 NINLQ9Y2I6 1382 aa31.35■■■□□ 2.61
CKLF-206ENST00000526149 EIF4G2P78344 907 aaKnown RBP eCLIP31.35■■■□□ 2.61
CKLF-206ENST00000526149 PRDM11Q9NQV5 511 aa31.35■■■□□ 2.61
CKLF-206ENST00000526149 TERF2IPQ9NYB0 399 aa31.35■■■□□ 2.61
CKLF-206ENST00000526149 COL14A1Q05707 1796 aaKnown RBP31.35■■■□□ 2.61
CKLF-206ENST00000526149 NWD2Q9ULI1 1742 aa31.35■■■□□ 2.61
CKLF-206ENST00000526149 CHRNA2Q15822 529 aa31.34■■■□□ 2.61
CKLF-206ENST00000526149 GJD4Q96KN9 370 aaPredicted RBP31.34■■■□□ 2.61
CKLF-206ENST00000526149 BTG4Q9NY30 223 aa31.34■■■□□ 2.61
CKLF-206ENST00000526149 SLIT3O75094 1523 aa31.34■■■□□ 2.61
CKLF-206ENST00000526149 RGS12O14924 1447 aa31.33■■■□□ 2.61
CKLF-206ENST00000526149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.33■■■□□ 2.61
CKLF-206ENST00000526149 VPS72Q15906 364 aa31.32■■■□□ 2.6
CKLF-206ENST00000526149 ZRANB1Q9UGI0 708 aa31.32■■■□□ 2.6
CKLF-206ENST00000526149 CPDO75976 1380 aa31.31■■■□□ 2.6
CKLF-206ENST00000526149 EDC4Q6P2E9 1401 aaKnown RBP31.31■■■□□ 2.6
CKLF-206ENST00000526149 CDCA8Q53HL2 280 aa31.3■■■□□ 2.6
CKLF-206ENST00000526149 NRAPQ86VF7 1730 aa31.29■■■□□ 2.6
CKLF-206ENST00000526149 NME9Q86XW9 330 aa31.29■■■□□ 2.6
CKLF-206ENST00000526149 GLI3P10071 1580 aa31.28■■■□□ 2.6
CKLF-206ENST00000526149 USP31Q70CQ4 1352 aa31.28■■■□□ 2.6
CKLF-206ENST00000526149 ANKRD36BQ8N2N9 1353 aa31.27■■■□□ 2.6
CKLF-206ENST00000526149 CAMTA1Q9Y6Y1 1673 aa31.22■■■□□ 2.59
CKLF-206ENST00000526149 LMO7Q8WWI1 1683 aa31.22■■■□□ 2.59
CKLF-206ENST00000526149 MYOM1P52179 1685 aa31.2■■■□□ 2.59
CKLF-206ENST00000526149 USP54Q70EL1 1684 aa31.2■■■□□ 2.59
CKLF-206ENST00000526149 KCNH5Q8NCM2 988 aa31.2■■■□□ 2.59
CKLF-206ENST00000526149 CCDC9Q9Y3X0 531 aaKnown RBP31.2■■■□□ 2.59
CKLF-206ENST00000526149 SOX12O15370 315 aa31.19■■■□□ 2.58
CKLF-206ENST00000526149 NFAT5O94916 1531 aa31.19■■■□□ 2.58
CKLF-206ENST00000526149 C11orf95C9JLR9 678 aaPredicted RBP31.18■■■□□ 2.58
CKLF-206ENST00000526149 ARHGEF25Q86VW2 580 aa31.18■■■□□ 2.58
CKLF-206ENST00000526149 SPATA31A5Q5VU36 1347 aa31.18■■■□□ 2.58
CKLF-206ENST00000526149 SPATA31A7Q8IWB4 1347 aa31.18■■■□□ 2.58
CKLF-206ENST00000526149 AATKQ6ZMQ8 1374 aa31.17■■■□□ 2.58
CKLF-206ENST00000526149 ZBTB7CA1YPR0 619 aa31.17■■■□□ 2.58
CKLF-206ENST00000526149 ONECUT3O60422 494 aaPredicted RBP31.17■■■□□ 2.58
CKLF-206ENST00000526149 STRN4Q9NRL3 753 aa31.17■■■□□ 2.58
CKLF-206ENST00000526149 OVOS2A0A0J9YW53 1432 aa31.16■■■□□ 2.58
CKLF-206ENST00000526149 OVOS2Q6IE36 1432 aa31.16■■■□□ 2.58
CKLF-206ENST00000526149 CARD14Q9BXL6 1004 aa31.16■■■□□ 2.58
CKLF-206ENST00000526149 AXIN2Q9Y2T1 843 aa31.14■■■□□ 2.58
CKLF-206ENST00000526149 COL18A1P39060 1754 aa31.14■■■□□ 2.58
CKLF-206ENST00000526149 EVA1CP58658 441 aa31.12■■■□□ 2.57
CKLF-206ENST00000526149 POLR3GLQ9BT43 218 aa31.12■■■□□ 2.57
CKLF-206ENST00000526149 FYB1O15117 783 aa31.11■■■□□ 2.57
CKLF-206ENST00000526149 COL5A2P05997 1499 aaPredicted RBP31.11■■■□□ 2.57
CKLF-206ENST00000526149 SPATA31A1Q5TZJ5 1347 aa31.11■■■□□ 2.57
CKLF-206ENST00000526149 LARP1Q6PKG0 1096 aaKnown RBP31.11■■■□□ 2.57
CKLF-206ENST00000526149 SEPT12Q8IYM1 358 aa31.11■■■□□ 2.57
CKLF-206ENST00000526149 FAM98CQ17RN3 349 aaKnown RBP31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms