RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CD163L1Q9NR16 1453 aa24.19■■□□□ 1.46
LMX1B-203ENST00000526117 MON2Q7Z3U7 1717 aa24.19■■□□□ 1.46
LMX1B-203ENST00000526117 MARF1Q9Y4F3 1742 aaKnown RBP24.18■■□□□ 1.46
LMX1B-203ENST00000526117 HSPA5P11021 654 aaKnown RBP24.16■■□□□ 1.46
LMX1B-203ENST00000526117 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
LMX1B-203ENST00000526117 NUTM2BA6NNL0 878 aaPredicted RBP24.15■■□□□ 1.46
LMX1B-203ENST00000526117 NUTM2EB1AL46 878 aaPredicted RBP24.15■■□□□ 1.46
LMX1B-203ENST00000526117 NUTM2AQ8IVF1 878 aaPredicted RBP24.15■■□□□ 1.46
LMX1B-203ENST00000526117 MEX3CQ5U5Q3 659 aaKnown RBP24.14■■□□□ 1.45
LMX1B-203ENST00000526117 TTC21AQ8NDW8 1320 aa24.13■■□□□ 1.45
LMX1B-203ENST00000526117 PAK3O75914 559 aaPredicted RBP24.13■■□□□ 1.45
LMX1B-203ENST00000526117 KTN1Q86UP2 1357 aaKnown RBP24.13■■□□□ 1.45
LMX1B-203ENST00000526117 SLC12A5Q9H2X9 1139 aa24.12■■□□□ 1.45
LMX1B-203ENST00000526117 TERF2IPQ9NYB0 399 aa24.12■■□□□ 1.45
LMX1B-203ENST00000526117 RGS17Q9UGC6 210 aaPredicted RBP24.12■■□□□ 1.45
LMX1B-203ENST00000526117 PHRF1Q9P1Y6 1649 aaKnown RBP24.12■■□□□ 1.45
LMX1B-203ENST00000526117 PIK3C2AO00443 1686 aa24.11■■□□□ 1.45
LMX1B-203ENST00000526117 EDC4Q6P2E9 1401 aaKnown RBP24.11■■□□□ 1.45
LMX1B-203ENST00000526117 LMOD2Q6P5Q4 547 aa24.11■■□□□ 1.45
LMX1B-203ENST00000526117 A0A1W2PP64 1363 aa24.11■■□□□ 1.45
LMX1B-203ENST00000526117 MYOM1P52179 1685 aa24.11■■□□□ 1.45
LMX1B-203ENST00000526117 USP54Q70EL1 1684 aa24.11■■□□□ 1.45
LMX1B-203ENST00000526117 USP19O94966 1318 aa24.1■■□□□ 1.45
LMX1B-203ENST00000526117 HDGFL2Q7Z4V5 671 aaPredicted RBP24.1■■□□□ 1.45
LMX1B-203ENST00000526117 ANKRD36BQ8N2N9 1353 aa24.1■■□□□ 1.45
LMX1B-203ENST00000526117 TTC21BQ7Z4L5 1316 aa24.1■■□□□ 1.45
LMX1B-203ENST00000526117 TMC1Q8TDI8 760 aa24.09■■□□□ 1.45
LMX1B-203ENST00000526117 ZNF772Q68DY9 489 aaPredicted RBP24.08■■□□□ 1.45
LMX1B-203ENST00000526117 FNBP4Q8N3X1 1017 aaPredicted RBP24.08■■□□□ 1.45
LMX1B-203ENST00000526117 ABTB2Q8N961 1025 aa24.08■■□□□ 1.45
LMX1B-203ENST00000526117 SLIT3O75094 1523 aa24.07■■□□□ 1.44
LMX1B-203ENST00000526117 ADAMTS2O95450 1211 aa24.07■■□□□ 1.44
LMX1B-203ENST00000526117 NLRP13Q86W25 1043 aa24.06■■□□□ 1.44
LMX1B-203ENST00000526117 SLIT2O94813 1529 aa24.05■■□□□ 1.44
LMX1B-203ENST00000526117 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.05■■□□□ 1.44
LMX1B-203ENST00000526117 CABLES1Q8TDN4 633 aa24.05■■□□□ 1.44
LMX1B-203ENST00000526117 C8orf37Q96NL8 207 aa24.05■■□□□ 1.44
LMX1B-203ENST00000526117 AFF2P51816 1311 aa24.05■■□□□ 1.44
LMX1B-203ENST00000526117 USP31Q70CQ4 1352 aa24.04■■□□□ 1.44
LMX1B-203ENST00000526117 NWD2Q9ULI1 1742 aa24.04■■□□□ 1.44
LMX1B-203ENST00000526117 HAP1P54257 671 aaPredicted RBP24.03■■□□□ 1.44
LMX1B-203ENST00000526117 NGLY1Q96IV0 654 aa24.03■■□□□ 1.44
LMX1B-203ENST00000526117 COL14A1Q05707 1796 aaKnown RBP24.03■■□□□ 1.44
LMX1B-203ENST00000526117 CPDO75976 1380 aa24.03■■□□□ 1.44
LMX1B-203ENST00000526117 BCL9LQ86UU0 1499 aa24.01■■□□□ 1.43
LMX1B-203ENST00000526117 PLCH1Q4KWH8 1693 aa24.01■■□□□ 1.43
LMX1B-203ENST00000526117 NLRP6P59044 892 aa23.99■■□□□ 1.43
LMX1B-203ENST00000526117 NUTM2GQ5VZR2 741 aa23.98■■□□□ 1.43
LMX1B-203ENST00000526117 POTEAQ6S8J7 498 aa23.98■■□□□ 1.43
LMX1B-203ENST00000526117 OVOS2A0A0J9YW53 1432 aa23.97■■□□□ 1.43
LMX1B-203ENST00000526117 ATRNO75882 1429 aa23.97■■□□□ 1.43
LMX1B-203ENST00000526117 GCP02774 474 aa23.97■■□□□ 1.43
LMX1B-203ENST00000526117 OVOS2Q6IE36 1432 aa23.97■■□□□ 1.43
LMX1B-203ENST00000526117 USP21Q9UK80 565 aa23.96■■□□□ 1.43
LMX1B-203ENST00000526117 NRAPQ86VF7 1730 aa23.96■■□□□ 1.43
LMX1B-203ENST00000526117 NFAT5O94916 1531 aa23.95■■□□□ 1.43
LMX1B-203ENST00000526117 KIAA0232Q92628 1395 aa23.95■■□□□ 1.42
LMX1B-203ENST00000526117 FAM83GA6ND36 823 aa23.95■■□□□ 1.42
LMX1B-203ENST00000526117 KCNH5Q8NCM2 988 aa23.95■■□□□ 1.42
LMX1B-203ENST00000526117 CDK12Q9NYV4 1490 aaPredicted RBP23.94■■□□□ 1.42
LMX1B-203ENST00000526117 C11orf95C9JLR9 678 aaPredicted RBP23.94■■□□□ 1.42
LMX1B-203ENST00000526117 UNC5CLQ8IV45 518 aa23.94■■□□□ 1.42
LMX1B-203ENST00000526117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.94■■□□□ 1.42
LMX1B-203ENST00000526117 LMO7Q8WWI1 1683 aa23.94■■□□□ 1.42
LMX1B-203ENST00000526117 ABCC6O95255 1503 aa23.94■■□□□ 1.42
LMX1B-203ENST00000526117 TRPC5Q9UL62 973 aaPredicted RBP23.93■■□□□ 1.42
LMX1B-203ENST00000526117 NME9Q86XW9 330 aa23.92■■□□□ 1.42
LMX1B-203ENST00000526117 PRDM11Q9NQV5 511 aa23.92■■□□□ 1.42
LMX1B-203ENST00000526117 KIF7Q2M1P5 1343 aa23.91■■□□□ 1.42
LMX1B-203ENST00000526117 ZEB1P37275 1124 aaPredicted RBP23.91■■□□□ 1.42
LMX1B-203ENST00000526117 QTRT2Q9H974 415 aaKnown RBP23.91■■□□□ 1.42
LMX1B-203ENST00000526117 PLEKHG5O94827 1062 aa23.9■■□□□ 1.42
LMX1B-203ENST00000526117 CARD14Q9BXL6 1004 aa23.9■■□□□ 1.42
LMX1B-203ENST00000526117 AATKQ6ZMQ8 1374 aa23.9■■□□□ 1.42
LMX1B-203ENST00000526117 KIF20BQ96Q89 1820 aa23.89■■□□□ 1.41
LMX1B-203ENST00000526117 NSD3Q9BZ95 1437 aa23.88■■□□□ 1.41
LMX1B-203ENST00000526117 ZC3H6P61129 1189 aaKnown RBP23.88■■□□□ 1.41
LMX1B-203ENST00000526117 RBM6P78332 1123 aaKnown RBP23.88■■□□□ 1.41
LMX1B-203ENST00000526117 RXRBP28702 533 aa23.87■■□□□ 1.41
LMX1B-203ENST00000526117 VPS72Q15906 364 aa23.87■■□□□ 1.41
LMX1B-203ENST00000526117 ARHGEF25Q86VW2 580 aa23.87■■□□□ 1.41
LMX1B-203ENST00000526117 BTG4Q9NY30 223 aa23.87■■□□□ 1.41
LMX1B-203ENST00000526117 COL18A1P39060 1754 aa23.87■■□□□ 1.41
LMX1B-203ENST00000526117 FYB1O15117 783 aa23.86■■□□□ 1.41
LMX1B-203ENST00000526117 ZRANB1Q9UGI0 708 aa23.86■■□□□ 1.41
LMX1B-203ENST00000526117 CCDC7Q96M83 1385 aa23.86■■□□□ 1.41
LMX1B-203ENST00000526117 COG3Q96JB2 828 aa23.85■■□□□ 1.41
LMX1B-203ENST00000526117 CAMTA1Q9Y6Y1 1673 aa23.85■■□□□ 1.41
LMX1B-203ENST00000526117 GLI3P10071 1580 aa23.83■■□□□ 1.41
LMX1B-203ENST00000526117 GJD4Q96KN9 370 aaPredicted RBP23.83■■□□□ 1.41
LMX1B-203ENST00000526117 POLR3GLQ9BT43 218 aa23.83■■□□□ 1.41
LMX1B-203ENST00000526117 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.4
LMX1B-203ENST00000526117 CHRNA2Q15822 529 aa23.82■■□□□ 1.4
LMX1B-203ENST00000526117 PANK3Q9H999 370 aa23.82■■□□□ 1.4
LMX1B-203ENST00000526117 WASHC2AQ641Q2 1341 aa23.82■■□□□ 1.4
LMX1B-203ENST00000526117 COL5A2P05997 1499 aaPredicted RBP23.81■■□□□ 1.4
LMX1B-203ENST00000526117 NSD2O96028 1365 aa23.8■■□□□ 1.4
LMX1B-203ENST00000526117 ANKRD26Q9UPS8 1709 aa23.8■■□□□ 1.4
LMX1B-203ENST00000526117 LTN1O94822 1766 aa23.8■■□□□ 1.4
LMX1B-203ENST00000526117 RGS12O14924 1447 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms