RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 UNC5CLQ8IV45 518 aa17.43■□□□□ 0.38
SSBP3-210ENST00000525990 GJD4Q96KN9 370 aaPredicted RBP17.42■□□□□ 0.38
SSBP3-210ENST00000525990 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
SSBP3-210ENST00000525990 CENPJQ9HC77 1338 aaPredicted RBP17.41■□□□□ 0.38
SSBP3-210ENST00000525990 FAM83GA6ND36 823 aa17.4■□□□□ 0.38
SSBP3-210ENST00000525990 ACEP12821 1306 aa17.39■□□□□ 0.37
SSBP3-210ENST00000525990 POLR3AO14802 1390 aaPredicted RBP17.39■□□□□ 0.37
SSBP3-210ENST00000525990 NRKQ7Z2Y5 1582 aa17.38■□□□□ 0.37
SSBP3-210ENST00000525990 NBPF8Q3BBV2 869 aa17.38■□□□□ 0.37
SSBP3-210ENST00000525990 NUTM2GQ5VZR2 741 aa17.38■□□□□ 0.37
SSBP3-210ENST00000525990 CABP2Q9NPB3 220 aa17.38■□□□□ 0.37
SSBP3-210ENST00000525990 ATAD2Q6PL18 1390 aa17.38■□□□□ 0.37
SSBP3-210ENST00000525990 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
SSBP3-210ENST00000525990 CCDC61Q9Y6R9 512 aa17.36■□□□□ 0.37
SSBP3-210ENST00000525990 EP400Q96L91 3159 aa17.35■□□□□ 0.37
SSBP3-210ENST00000525990 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
SSBP3-210ENST00000525990 VPS72Q15906 364 aa17.35■□□□□ 0.37
SSBP3-210ENST00000525990 ROCK2O75116 1388 aaKnown RBP17.35■□□□□ 0.37
SSBP3-210ENST00000525990 AKAP12Q02952 1782 aa17.35■□□□□ 0.37
SSBP3-210ENST00000525990 BTG4Q9NY30 223 aa17.34■□□□□ 0.37
SSBP3-210ENST00000525990 CCDC9Q9Y3X0 531 aaKnown RBP17.34■□□□□ 0.37
SSBP3-210ENST00000525990 PIK3C2AO00443 1686 aa17.33■□□□□ 0.37
SSBP3-210ENST00000525990 PLEKHG3A1L390 1219 aa17.33■□□□□ 0.36
SSBP3-210ENST00000525990 KIAA0232Q92628 1395 aa17.32■□□□□ 0.36
SSBP3-210ENST00000525990 CHRNA2Q15822 529 aa17.32■□□□□ 0.36
SSBP3-210ENST00000525990 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
SSBP3-210ENST00000525990 LMO7Q8WWI1 1683 aa17.31■□□□□ 0.36
SSBP3-210ENST00000525990 THSD7AQ9UPZ6 1657 aa17.3■□□□□ 0.36
SSBP3-210ENST00000525990 ZC3H6P61129 1189 aaKnown RBP17.3■□□□□ 0.36
SSBP3-210ENST00000525990 PRDM11Q9NQV5 511 aa17.3■□□□□ 0.36
SSBP3-210ENST00000525990 CABP1Q9NZU7 370 aa17.29■□□□□ 0.36
SSBP3-210ENST00000525990 USP6P35125 1406 aa17.29■□□□□ 0.36
SSBP3-210ENST00000525990 FAM98CQ17RN3 349 aaKnown RBP17.28■□□□□ 0.36
SSBP3-210ENST00000525990 CAMTA1Q9Y6Y1 1673 aa17.27■□□□□ 0.36
SSBP3-210ENST00000525990 TRIM26Q12899 539 aaPredicted RBP17.27■□□□□ 0.36
SSBP3-210ENST00000525990 ABTB2Q8N961 1025 aa17.27■□□□□ 0.36
SSBP3-210ENST00000525990 RGPD5Q99666 1765 aa17.27■□□□□ 0.35
SSBP3-210ENST00000525990 MON2Q7Z3U7 1717 aa17.27■□□□□ 0.35
SSBP3-210ENST00000525990 USP19O94966 1318 aa17.26■□□□□ 0.35
SSBP3-210ENST00000525990 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
SSBP3-210ENST00000525990 TONSLQ96HA7 1378 aa17.26■□□□□ 0.35
SSBP3-210ENST00000525990 EVC2Q86UK5 1308 aa17.25■□□□□ 0.35
SSBP3-210ENST00000525990 A0A0G2JS52 829 aa17.25■□□□□ 0.35
SSBP3-210ENST00000525990 MYT1Q01538 1121 aa17.25■□□□□ 0.35
SSBP3-210ENST00000525990 SPATA31A5Q5VU36 1347 aa17.24■□□□□ 0.35
SSBP3-210ENST00000525990 SPATA31A7Q8IWB4 1347 aa17.24■□□□□ 0.35
SSBP3-210ENST00000525990 SSH2Q76I76 1423 aa17.24■□□□□ 0.35
SSBP3-210ENST00000525990 STRN4Q9NRL3 753 aa17.24■□□□□ 0.35
SSBP3-210ENST00000525990 SLIT3O75094 1523 aa17.24■□□□□ 0.35
SSBP3-210ENST00000525990 COL18A1P39060 1754 aa17.24■□□□□ 0.35
SSBP3-210ENST00000525990 FAM182BQ5T319 152 aa17.23■□□□□ 0.35
SSBP3-210ENST00000525990 KRT27Q7Z3Y8 459 aa17.23■□□□□ 0.35
SSBP3-210ENST00000525990 BLMP54132 1417 aaPredicted RBP17.22■□□□□ 0.35
SSBP3-210ENST00000525990 TNS1Q9HBL0 1735 aaKnown RBP17.22■□□□□ 0.35
SSBP3-210ENST00000525990 CARD11Q9BXL7 1154 aa17.22■□□□□ 0.35
SSBP3-210ENST00000525990 RGPD1P0DJD0 1748 aa17.21■□□□□ 0.35
SSBP3-210ENST00000525990 CPDO75976 1380 aa17.2■□□□□ 0.34
SSBP3-210ENST00000525990 WNK3Q9BYP7 1800 aa17.2■□□□□ 0.34
SSBP3-210ENST00000525990 GCP02774 474 aa17.2■□□□□ 0.34
SSBP3-210ENST00000525990 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
SSBP3-210ENST00000525990 CPSF1Q10570 1443 aaKnown RBP17.2■□□□□ 0.34
SSBP3-210ENST00000525990 SPATA31A1Q5TZJ5 1347 aa17.2■□□□□ 0.34
SSBP3-210ENST00000525990 COL5A2P05997 1499 aaPredicted RBP17.19■□□□□ 0.34
SSBP3-210ENST00000525990 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
SSBP3-210ENST00000525990 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
SSBP3-210ENST00000525990 CD163L1Q9NR16 1453 aa17.18■□□□□ 0.34
SSBP3-210ENST00000525990 BRD4O60885 1362 aaPredicted RBP17.18■□□□□ 0.34
SSBP3-210ENST00000525990 SBNO2Q9Y2G9 1366 aa17.18■□□□□ 0.34
SSBP3-210ENST00000525990 ZBTB7CA1YPR0 619 aa17.18■□□□□ 0.34
SSBP3-210ENST00000525990 NLRP6P59044 892 aa17.18■□□□□ 0.34
SSBP3-210ENST00000525990 LARP1Q6PKG0 1096 aaKnown RBP17.18■□□□□ 0.34
SSBP3-210ENST00000525990 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
SSBP3-210ENST00000525990 TTC21BQ7Z4L5 1316 aa17.17■□□□□ 0.34
SSBP3-210ENST00000525990 USP54Q70EL1 1684 aa17.16■□□□□ 0.34
SSBP3-210ENST00000525990 PARP4Q9UKK3 1724 aaKnown RBP17.16■□□□□ 0.34
SSBP3-210ENST00000525990 LTN1O94822 1766 aa17.16■□□□□ 0.34
SSBP3-210ENST00000525990 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
SSBP3-210ENST00000525990 ZRANB1Q9UGI0 708 aa17.15■□□□□ 0.34
SSBP3-210ENST00000525990 NFAT5O94916 1531 aa17.15■□□□□ 0.34
SSBP3-210ENST00000525990 SOX12O15370 315 aa17.14■□□□□ 0.33
SSBP3-210ENST00000525990 EVA1CP58658 441 aa17.14■□□□□ 0.33
SSBP3-210ENST00000525990 LRRC37A3O60309 1634 aa17.14■□□□□ 0.33
SSBP3-210ENST00000525990 AXIN2Q9Y2T1 843 aa17.11■□□□□ 0.33
SSBP3-210ENST00000525990 AATKQ6ZMQ8 1374 aa17.11■□□□□ 0.33
SSBP3-210ENST00000525990 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
SSBP3-210ENST00000525990 SF3B2Q13435 895 aaKnown RBP17.1■□□□□ 0.33
SSBP3-210ENST00000525990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.1■□□□□ 0.33
SSBP3-210ENST00000525990 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-210ENST00000525990 SLC12A5Q9H2X9 1139 aa17.1■□□□□ 0.33
SSBP3-210ENST00000525990 TTC21AQ8NDW8 1320 aa17.1■□□□□ 0.33
SSBP3-210ENST00000525990 CRB1P82279 1406 aa17.1■□□□□ 0.33
SSBP3-210ENST00000525990 PEAK1Q9H792 1746 aa17.1■□□□□ 0.33
SSBP3-210ENST00000525990 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
SSBP3-210ENST00000525990 BARGINQ6ZT62 677 aa17.09■□□□□ 0.33
SSBP3-210ENST00000525990 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
SSBP3-210ENST00000525990 TESK2Q96S53 571 aa17.09■□□□□ 0.33
SSBP3-210ENST00000525990 A0A1W2PP64 1363 aa17.09■□□□□ 0.33
SSBP3-210ENST00000525990 NME9Q86XW9 330 aa17.08■□□□□ 0.32
SSBP3-210ENST00000525990 TCP11L2Q8N4U5 519 aa17.08■□□□□ 0.32
SSBP3-210ENST00000525990 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms