RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 GMPR2Q9P2T1 348 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-218ENST00000525745 C11orf95C9JLR9 678 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-218ENST00000525745 QPCTQ16769 361 aa6.38□□□□□ -1.39
ECHDC1-218ENST00000525745 WASF2Q9Y6W5 498 aa6.38□□□□□ -1.39
ECHDC1-218ENST00000525745 SIAH2O43255 324 aa6.37□□□□□ -1.39
ECHDC1-218ENST00000525745 ZNF511Q8NB15 262 aa6.37□□□□□ -1.39
ECHDC1-218ENST00000525745 MAP10Q9P2G4 905 aa6.37□□□□□ -1.39
ECHDC1-218ENST00000525745 CLK2P49760 499 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-218ENST00000525745 ATP13A2Q9NQ11 1180 aa6.36□□□□□ -1.39
ECHDC1-218ENST00000525745 POLR3EQ9NVU0 708 aa6.36□□□□□ -1.39
ECHDC1-218ENST00000525745 TLL2Q9Y6L7 1015 aa6.36□□□□□ -1.39
ECHDC1-218ENST00000525745 PER1O15534 1290 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-218ENST00000525745 LILRB3O75022 631 aa6.35□□□□□ -1.39
ECHDC1-218ENST00000525745 RSPH6AQ9H0K4 717 aa6.35□□□□□ -1.39
ECHDC1-218ENST00000525745 F12P00748 615 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-218ENST00000525745 VARSP26640 1264 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-218ENST00000525745 AGERQ15109 404 aa6.34□□□□□ -1.39
ECHDC1-218ENST00000525745 TUSC1Q2TAM9 212 aa6.34□□□□□ -1.39
ECHDC1-218ENST00000525745 HELBQ8NG08 1087 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-218ENST00000525745 GPBP1L1Q9HC44 474 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-218ENST00000525745 ATP1B4Q9UN42 357 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-218ENST00000525745 RTL5Q5HYW3 569 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-218ENST00000525745 FOXJ1Q92949 421 aa6.33□□□□□ -1.4
ECHDC1-218ENST00000525745 PLEKHG3A1L390 1219 aa6.32□□□□□ -1.4
ECHDC1-218ENST00000525745 CAPN5O15484 640 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-218ENST00000525745 KDM4CQ9H3R0 1056 aa6.32□□□□□ -1.4
ECHDC1-218ENST00000525745 SENP2Q9HC62 589 aa6.32□□□□□ -1.4
ECHDC1-218ENST00000525745 BMP1P13497 986 aa6.31□□□□□ -1.4
ECHDC1-218ENST00000525745 SNRPBP14678 240 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-218ENST00000525745 NNTQ13423 1086 aa6.31□□□□□ -1.4
ECHDC1-218ENST00000525745 ARID5BQ14865 1188 aa6.31□□□□□ -1.4
ECHDC1-218ENST00000525745 FAM174AQ8TBP5 190 aa6.31□□□□□ -1.4
ECHDC1-218ENST00000525745 TRIM47Q96LD4 638 aa6.31□□□□□ -1.4
ECHDC1-218ENST00000525745 FAM117AQ9C073 453 aa6.3□□□□□ -1.4
ECHDC1-218ENST00000525745 BPHLQ86WA6 291 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-218ENST00000525745 ARMC2Q8NEN0 867 aa6.29□□□□□ -1.4
ECHDC1-218ENST00000525745 KIFC2Q96AC6 838 aa6.29□□□□□ -1.4
ECHDC1-218ENST00000525745 DDRGK1Q96HY6 314 aa6.29□□□□□ -1.4
ECHDC1-218ENST00000525745 CTDSPL2Q05D32 466 aa6.28□□□□□ -1.4
ECHDC1-218ENST00000525745 SKIV2LQ15477 1246 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-218ENST00000525745 C4orf48Q5BLP8 95 aa6.28□□□□□ -1.4
ECHDC1-218ENST00000525745 NBPF14Q5TI25 921 aa6.28□□□□□ -1.4
ECHDC1-218ENST00000525745 TREML4Q6UXN2 200 aa6.28□□□□□ -1.4
ECHDC1-218ENST00000525745 MAGEB6P1A0A0J9YX57 407 aa6.27□□□□□ -1.41
ECHDC1-218ENST00000525745 WFS1O76024 890 aa6.27□□□□□ -1.41
ECHDC1-218ENST00000525745 ADH1CP00326 375 aa6.27□□□□□ -1.41
ECHDC1-218ENST00000525745 WDR4P57081 412 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-218ENST00000525745 SH3D19Q5HYK7 790 aa6.27□□□□□ -1.41
ECHDC1-218ENST00000525745 TRIM46Q7Z4K8 759 aa6.27□□□□□ -1.41
ECHDC1-218ENST00000525745 MPNDQ8N594 471 aa6.27□□□□□ -1.41
ECHDC1-218ENST00000525745 PROCA1Q8NCQ7 364 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-218ENST00000525745 CDK15Q96Q40 435 aa6.26□□□□□ -1.41
ECHDC1-218ENST00000525745 TIMP2P16035 220 aa6.25□□□□□ -1.41
ECHDC1-218ENST00000525745 FBXO31Q5XUX0 539 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-218ENST00000525745 LRRN4Q8WUT4 740 aa6.25□□□□□ -1.41
ECHDC1-218ENST00000525745 CARD14Q9BXL6 1004 aa6.25□□□□□ -1.41
ECHDC1-218ENST00000525745 AP1G2O75843 785 aa6.24□□□□□ -1.41
ECHDC1-218ENST00000525745 FSHRP23945 695 aa6.24□□□□□ -1.41
ECHDC1-218ENST00000525745 NFX1Q12986 1120 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-218ENST00000525745 LCE2AQ5TA79 106 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-218ENST00000525745 SH3RF1Q7Z6J0 888 aa6.24□□□□□ -1.41
ECHDC1-218ENST00000525745 ZFP42Q96MM3 310 aa6.24□□□□□ -1.41
ECHDC1-218ENST00000525745 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.24□□□□□ -1.41
ECHDC1-218ENST00000525745 TERTO14746 1132 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 ZIC2O95409 532 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 NR3C2P08235 984 aa6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 GRM5P41594 1212 aa6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 NR5A1Q13285 461 aa6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 SCARF1Q14162 830 aa6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 MRPL14Q6P1L8 145 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 VASH1Q7L8A9 365 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 SH3BP5LQ7L8J4 393 aa6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 ITPKCQ96DU7 683 aa6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 PURBQ96QR8 312 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 C1QTNF2Q9BXJ5 285 aa6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 ZFAND3Q9H8U3 227 aa6.23□□□□□ -1.41
ECHDC1-218ENST00000525745 NR6A1Q15406 480 aa6.22□□□□□ -1.41
ECHDC1-218ENST00000525745 GPKOWQ92917 476 aaPredicted RBP eCLIP6.22□□□□□ -1.41
ECHDC1-218ENST00000525745 KLF16Q9BXK1 252 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-218ENST00000525745 NEUROD2Q15784 382 aa6.21□□□□□ -1.42
ECHDC1-218ENST00000525745 PPP2R2DQ66LE6 453 aa6.21□□□□□ -1.42
ECHDC1-218ENST00000525745 ARHGAP9Q9BRR9 750 aa6.21□□□□□ -1.42
ECHDC1-218ENST00000525745 FKBPLQ9UIM3 349 aa6.21□□□□□ -1.42
ECHDC1-218ENST00000525745 ERFEQ4G0M1 354 aa6.2□□□□□ -1.42
ECHDC1-218ENST00000525745 C6orf118Q5T5N4 469 aa6.2□□□□□ -1.42
ECHDC1-218ENST00000525745 TRMT44Q8IYL2 757 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-218ENST00000525745 MAP4K5Q9Y4K4 846 aa6.2□□□□□ -1.42
ECHDC1-218ENST00000525745 SOBPA7XYQ1 873 aa6.19□□□□□ -1.42
ECHDC1-218ENST00000525745 VEGFBP49765 207 aa6.19□□□□□ -1.42
ECHDC1-218ENST00000525745 PDXDC2PQ6P474 469 aa6.19□□□□□ -1.42
ECHDC1-218ENST00000525745 ZBTB33Q86T24 672 aa6.19□□□□□ -1.42
ECHDC1-218ENST00000525745 CCDC116Q8IYX3 515 aa6.19□□□□□ -1.42
ECHDC1-218ENST00000525745 SLC16A10Q8TF71 515 aa6.19□□□□□ -1.42
ECHDC1-218ENST00000525745 SLC10A4Q96EP9 437 aa6.19□□□□□ -1.42
ECHDC1-218ENST00000525745 NXF1Q9UBU9 619 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-218ENST00000525745 UPP2O95045 317 aa6.18□□□□□ -1.42
ECHDC1-218ENST00000525745 USP17L8P0C7I0 530 aa6.18□□□□□ -1.42
ECHDC1-218ENST00000525745 BMP2P12643 396 aa6.18□□□□□ -1.42
ECHDC1-218ENST00000525745 IL27Q8NEV9 243 aa6.18□□□□□ -1.42
ECHDC1-218ENST00000525745 EPS8L1Q8TE68 723 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms