RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
NDUFS3-204ENST00000525378 NUDT16Q96DE0 195 aaKnown RBP17.12■□□□□ 0.33
NDUFS3-204ENST00000525378 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
NDUFS3-204ENST00000525378 ZRANB1Q9UGI0 708 aa17.12■□□□□ 0.33
NDUFS3-204ENST00000525378 TOPAZ1Q8N9V7 1692 aa17.12■□□□□ 0.33
NDUFS3-204ENST00000525378 PAK3O75914 559 aaPredicted RBP17.11■□□□□ 0.33
NDUFS3-204ENST00000525378 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
NDUFS3-204ENST00000525378 KRT27Q7Z3Y8 459 aa17.1■□□□□ 0.33
NDUFS3-204ENST00000525378 DEFB132Q7Z7B7 95 aa17.1■□□□□ 0.33
NDUFS3-204ENST00000525378 CDK19Q9BWU1 502 aa17.09■□□□□ 0.33
NDUFS3-204ENST00000525378 FAM98CQ17RN3 349 aaKnown RBP17.08■□□□□ 0.32
NDUFS3-204ENST00000525378 NBPF1Q3BBV0 1214 aa17.08■□□□□ 0.32
NDUFS3-204ENST00000525378 A0A0G2JS52 829 aa17.07■□□□□ 0.32
NDUFS3-204ENST00000525378 MYT1Q01538 1121 aa17.07■□□□□ 0.32
NDUFS3-204ENST00000525378 POLR3AO14802 1390 aaPredicted RBP17.05■□□□□ 0.32
NDUFS3-204ENST00000525378 SPATA31A5Q5VU36 1347 aa17.05■□□□□ 0.32
NDUFS3-204ENST00000525378 SPATA31A7Q8IWB4 1347 aa17.05■□□□□ 0.32
NDUFS3-204ENST00000525378 THSD7AQ9UPZ6 1657 aa17.05■□□□□ 0.32
NDUFS3-204ENST00000525378 SF3B2Q13435 895 aaKnown RBP17.05■□□□□ 0.32
NDUFS3-204ENST00000525378 PRDM11Q9NQV5 511 aa17.05■□□□□ 0.32
NDUFS3-204ENST00000525378 KIAA0232Q92628 1395 aa17.04■□□□□ 0.32
NDUFS3-204ENST00000525378 ACEP12821 1306 aa17.04■□□□□ 0.32
NDUFS3-204ENST00000525378 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
NDUFS3-204ENST00000525378 CHRNA2Q15822 529 aa17.03■□□□□ 0.32
NDUFS3-204ENST00000525378 NBPF8Q3BBV2 869 aa17.03■□□□□ 0.32
NDUFS3-204ENST00000525378 CCDC61Q9Y6R9 512 aa17.03■□□□□ 0.32
NDUFS3-204ENST00000525378 RGPD1P0DJD0 1748 aa17.02■□□□□ 0.32
NDUFS3-204ENST00000525378 QRICH2Q9H0J4 1663 aa17.02■□□□□ 0.32
NDUFS3-204ENST00000525378 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
NDUFS3-204ENST00000525378 ZC3H6P61129 1189 aaKnown RBP17.02■□□□□ 0.32
NDUFS3-204ENST00000525378 FAM182BQ5T319 152 aa17.02■□□□□ 0.32
NDUFS3-204ENST00000525378 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
NDUFS3-204ENST00000525378 STRN4Q9NRL3 753 aa17■□□□□ 0.31
NDUFS3-204ENST00000525378 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
NDUFS3-204ENST00000525378 TNS1Q9HBL0 1735 aaKnown RBP16.99■□□□□ 0.31
NDUFS3-204ENST00000525378 SPATA31A1Q5TZJ5 1347 aa16.98■□□□□ 0.31
NDUFS3-204ENST00000525378 PPIP5K1Q6PFW1 1433 aa16.98■□□□□ 0.31
NDUFS3-204ENST00000525378 BAG6P46379 1132 aa16.98■□□□□ 0.31
NDUFS3-204ENST00000525378 CABP2Q9NPB3 220 aa16.98■□□□□ 0.31
NDUFS3-204ENST00000525378 LMO7Q8WWI1 1683 aa16.97■□□□□ 0.31
NDUFS3-204ENST00000525378 SRPK2P78362 688 aaKnown RBP16.97■□□□□ 0.31
NDUFS3-204ENST00000525378 ABTB2Q8N961 1025 aa16.97■□□□□ 0.31
NDUFS3-204ENST00000525378 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
NDUFS3-204ENST00000525378 TRPM1Q7Z4N2 1603 aa16.96■□□□□ 0.31
NDUFS3-204ENST00000525378 SRCAPQ6ZRS2 3230 aa16.96■□□□□ 0.31
NDUFS3-204ENST00000525378 L3MBTL2Q969R5 705 aa16.96■□□□□ 0.31
NDUFS3-204ENST00000525378 USP19O94966 1318 aa16.96■□□□□ 0.3
NDUFS3-204ENST00000525378 EN1Q05925 392 aaPredicted RBP16.95■□□□□ 0.3
NDUFS3-204ENST00000525378 SSH2Q76I76 1423 aa16.95■□□□□ 0.3
NDUFS3-204ENST00000525378 SIN3AQ96ST3 1273 aa16.94■□□□□ 0.3
NDUFS3-204ENST00000525378 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
NDUFS3-204ENST00000525378 CPDO75976 1380 aa16.93■□□□□ 0.3
NDUFS3-204ENST00000525378 PSDA5PKW4 1024 aaPredicted RBP16.93■□□□□ 0.3
NDUFS3-204ENST00000525378 LRP5O75197 1615 aa16.92■□□□□ 0.3
NDUFS3-204ENST00000525378 EVA1CP58658 441 aa16.92■□□□□ 0.3
NDUFS3-204ENST00000525378 LARP1Q6PKG0 1096 aaKnown RBP16.92■□□□□ 0.3
NDUFS3-204ENST00000525378 NLRP13Q86W25 1043 aa16.92■□□□□ 0.3
NDUFS3-204ENST00000525378 CABP1Q9NZU7 370 aa16.92■□□□□ 0.3
NDUFS3-204ENST00000525378 DISP2A7MBM2 1401 aa16.91■□□□□ 0.3
NDUFS3-204ENST00000525378 USP6P35125 1406 aa16.91■□□□□ 0.3
NDUFS3-204ENST00000525378 GCP02774 474 aa16.91■□□□□ 0.3
NDUFS3-204ENST00000525378 BARGINQ6ZT62 677 aa16.91■□□□□ 0.3
NDUFS3-204ENST00000525378 PIK3C2AO00443 1686 aa16.9■□□□□ 0.3
NDUFS3-204ENST00000525378 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.3
NDUFS3-204ENST00000525378 AKAP12Q02952 1782 aa16.89■□□□□ 0.3
NDUFS3-204ENST00000525378 TRIM37O94972 964 aa16.89■□□□□ 0.29
NDUFS3-204ENST00000525378 EZH2Q15910 746 aaKnown RBP16.89■□□□□ 0.29
NDUFS3-204ENST00000525378 FAM196AQ6ZSG2 479 aa16.89■□□□□ 0.29
NDUFS3-204ENST00000525378 COL5A2P05997 1499 aaPredicted RBP16.88■□□□□ 0.29
NDUFS3-204ENST00000525378 PARP4Q9UKK3 1724 aaKnown RBP16.88■□□□□ 0.29
NDUFS3-204ENST00000525378 COL18A1P39060 1754 aa16.88■□□□□ 0.29
NDUFS3-204ENST00000525378 SLIT3O75094 1523 aa16.88■□□□□ 0.29
NDUFS3-204ENST00000525378 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
NDUFS3-204ENST00000525378 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
NDUFS3-204ENST00000525378 NLRP6P59044 892 aa16.87■□□□□ 0.29
NDUFS3-204ENST00000525378 TCP11L2Q8N4U5 519 aa16.87■□□□□ 0.29
NDUFS3-204ENST00000525378 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
NDUFS3-204ENST00000525378 CAMKK2Q96RR4 588 aa16.86■□□□□ 0.29
NDUFS3-204ENST00000525378 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
NDUFS3-204ENST00000525378 ROCK2O75116 1388 aaKnown RBP16.86■□□□□ 0.29
NDUFS3-204ENST00000525378 RREB1Q92766 1687 aa16.85■□□□□ 0.29
NDUFS3-204ENST00000525378 PDE3BQ13370 1112 aa16.85■□□□□ 0.29
NDUFS3-204ENST00000525378 R3HDM1Q15032 1099 aaKnown RBP16.85■□□□□ 0.29
NDUFS3-204ENST00000525378 SBF2Q86WG5 1849 aa16.84■□□□□ 0.29
NDUFS3-204ENST00000525378 APBA3O96018 575 aa16.84■□□□□ 0.29
NDUFS3-204ENST00000525378 THRAP3Q9Y2W1 955 aaKnown RBP16.84■□□□□ 0.29
NDUFS3-204ENST00000525378 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
NDUFS3-204ENST00000525378 WNK3Q9BYP7 1800 aa16.84■□□□□ 0.29
NDUFS3-204ENST00000525378 CRB1P82279 1406 aa16.83■□□□□ 0.28
NDUFS3-204ENST00000525378 PEAK1Q9H792 1746 aa16.82■□□□□ 0.28
NDUFS3-204ENST00000525378 AATKQ6ZMQ8 1374 aa16.82■□□□□ 0.28
NDUFS3-204ENST00000525378 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
NDUFS3-204ENST00000525378 TTC21BQ7Z4L5 1316 aa16.81■□□□□ 0.28
NDUFS3-204ENST00000525378 MON2Q7Z3U7 1717 aa16.81■□□□□ 0.28
NDUFS3-204ENST00000525378 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
NDUFS3-204ENST00000525378 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
NDUFS3-204ENST00000525378 PARD3Q8TEW0 1356 aa16.79■□□□□ 0.28
NDUFS3-204ENST00000525378 ZNF692Q9BU19 519 aaPredicted RBP16.79■□□□□ 0.28
NDUFS3-204ENST00000525378 TOM1L2Q6ZVM7 507 aa16.78■□□□□ 0.28
NDUFS3-204ENST00000525378 SOX12O15370 315 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms