RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
LRRK1-202ENST00000525284 ERC2O15083 957 aa16.25■□□□□ 0.19
LRRK1-202ENST00000525284 TMCO3Q6UWJ1 677 aa16.25■□□□□ 0.19
LRRK1-202ENST00000525284 STAMBPO95630 424 aa16.25■□□□□ 0.19
LRRK1-202ENST00000525284 HSP90AB4PQ58FF6 505 aa16.25■□□□□ 0.19
LRRK1-202ENST00000525284 SYTL4Q96C24 671 aaPredicted RBP16.24■□□□□ 0.19
LRRK1-202ENST00000525284 EVA1CP58658 441 aa16.24■□□□□ 0.19
LRRK1-202ENST00000525284 PUS7Q96PZ0 661 aaKnown RBP16.24■□□□□ 0.19
LRRK1-202ENST00000525284 PPP1R1BQ9UD71 204 aaPredicted RBP16.24■□□□□ 0.19
LRRK1-202ENST00000525284 MBD3O95983 291 aa16.23■□□□□ 0.19
LRRK1-202ENST00000525284 PSMA5P28066 241 aa16.23■□□□□ 0.19
LRRK1-202ENST00000525284 STK38Q15208 465 aa16.23■□□□□ 0.19
LRRK1-202ENST00000525284 IQCEQ6IPM2 695 aa16.23■□□□□ 0.19
LRRK1-202ENST00000525284 PHLDB1Q86UU1 1377 aa16.23■□□□□ 0.19
LRRK1-202ENST00000525284 SSR1P43307 286 aaKnown RBP16.23■□□□□ 0.19
LRRK1-202ENST00000525284 FKBP5Q13451 457 aaPredicted RBP16.23■□□□□ 0.19
LRRK1-202ENST00000525284 PRKCSHP14314 528 aaPredicted RBP16.23■□□□□ 0.19
LRRK1-202ENST00000525284 RNF187Q5TA31 235 aaPredicted RBP16.23■□□□□ 0.19
LRRK1-202ENST00000525284 PPM1EQ8WY54 764 aa16.23■□□□□ 0.19
LRRK1-202ENST00000525284 DZIP1LQ8IYY4 767 aaKnown RBP16.22■□□□□ 0.19
LRRK1-202ENST00000525284 AEBP2Q6ZN18 517 aaPredicted RBP16.22■□□□□ 0.19
LRRK1-202ENST00000525284 SPATA24Q86W54 205 aa16.22■□□□□ 0.19
LRRK1-202ENST00000525284 CBX1P83916 185 aa16.22■□□□□ 0.19
LRRK1-202ENST00000525284 UBE4AQ14139 1066 aa16.22■□□□□ 0.19
LRRK1-202ENST00000525284 TXLNBQ8N3L3 684 aa16.21■□□□□ 0.19
LRRK1-202ENST00000525284 ZNF396Q96N95 335 aaPredicted RBP16.21■□□□□ 0.19
LRRK1-202ENST00000525284 DDX58O95786 925 aaKnown RBP16.21■□□□□ 0.18
LRRK1-202ENST00000525284 PDCL2Q8N4E4 241 aa16.21■□□□□ 0.18
LRRK1-202ENST00000525284 SART3Q15020 963 aaKnown RBP16.2■□□□□ 0.18
LRRK1-202ENST00000525284 DDX23Q9BUQ8 820 aaKnown RBP16.2■□□□□ 0.18
LRRK1-202ENST00000525284 CRACR2AQ9BSW2 395 aa16.2■□□□□ 0.18
LRRK1-202ENST00000525284 SERPINA10Q9UK55 444 aa16.2■□□□□ 0.18
LRRK1-202ENST00000525284 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
LRRK1-202ENST00000525284 RRP9O43818 475 aaKnown RBP16.19■□□□□ 0.18
LRRK1-202ENST00000525284 CCDC192P0DO97 292 aa16.19■□□□□ 0.18
LRRK1-202ENST00000525284 TNMDQ9H2S6 317 aa16.19■□□□□ 0.18
LRRK1-202ENST00000525284 CDC45O75419 566 aa16.19■□□□□ 0.18
LRRK1-202ENST00000525284 STIM1Q13586 685 aa16.19■□□□□ 0.18
LRRK1-202ENST00000525284 TAF4BQ92750 862 aa16.19■□□□□ 0.18
LRRK1-202ENST00000525284 API5Q9BZZ5 524 aaKnown RBP16.18■□□□□ 0.18
LRRK1-202ENST00000525284 MYBBP1AQ9BQG0 1328 aaKnown RBP16.18■□□□□ 0.18
LRRK1-202ENST00000525284 VPS8Q8N3P4 1428 aa16.18■□□□□ 0.18
LRRK1-202ENST00000525284 JAKMIP3Q5VZ66 844 aa16.18■□□□□ 0.18
LRRK1-202ENST00000525284 FSD1Q9BTV5 496 aa16.18■□□□□ 0.18
LRRK1-202ENST00000525284 KIAA1328Q86T90 577 aa16.18■□□□□ 0.18
LRRK1-202ENST00000525284 CGNQ9P2M7 1197 aaKnown RBP16.17■□□□□ 0.18
LRRK1-202ENST00000525284 DACH1Q9UI36 760 aa16.17■□□□□ 0.18
LRRK1-202ENST00000525284 SETD5Q9C0A6 1442 aa16.17■□□□□ 0.18
LRRK1-202ENST00000525284 UBXN4Q92575 508 aa16.17■□□□□ 0.18
LRRK1-202ENST00000525284 NINLQ9Y2I6 1382 aa16.16■□□□□ 0.18
LRRK1-202ENST00000525284 ROCK1Q13464 1354 aa16.16■□□□□ 0.18
LRRK1-202ENST00000525284 NEK4P51957 841 aa16.16■□□□□ 0.18
LRRK1-202ENST00000525284 DDX11Q96FC9 970 aa16.16■□□□□ 0.18
LRRK1-202ENST00000525284 CBFA2T2O43439 604 aa16.16■□□□□ 0.18
LRRK1-202ENST00000525284 ANAPC15P60006 121 aa16.16■□□□□ 0.18
LRRK1-202ENST00000525284 CNTROBQ8N137 903 aa16.15■□□□□ 0.18
LRRK1-202ENST00000525284 KIF15Q9NS87 1388 aa16.15■□□□□ 0.18
LRRK1-202ENST00000525284 DHX8Q14562 1220 aaKnown RBP16.15■□□□□ 0.18
LRRK1-202ENST00000525284 COG3Q96JB2 828 aa16.15■□□□□ 0.18
LRRK1-202ENST00000525284 GOPCQ9HD26 462 aa16.15■□□□□ 0.18
LRRK1-202ENST00000525284 ME1P48163 572 aa16.15■□□□□ 0.18
LRRK1-202ENST00000525284 PANK3Q9H999 370 aa16.15■□□□□ 0.18
LRRK1-202ENST00000525284 APAF1O14727 1248 aa16.15■□□□□ 0.18
LRRK1-202ENST00000525284 CCDC148Q8NFR7 591 aa16.15■□□□□ 0.18
LRRK1-202ENST00000525284 AIMP1Q12904 312 aaKnown RBP16.15■□□□□ 0.18
LRRK1-202ENST00000525284 STK3Q13188 491 aa16.15■□□□□ 0.18
LRRK1-202ENST00000525284 TRAK1Q9UPV9 953 aa16.15■□□□□ 0.18
LRRK1-202ENST00000525284 CLGNO14967 610 aa16.14■□□□□ 0.17
LRRK1-202ENST00000525284 POLR3GO15318 223 aaPredicted RBP16.14■□□□□ 0.17
LRRK1-202ENST00000525284 FILIP1Q7Z7B0 1213 aa16.14■□□□□ 0.17
LRRK1-202ENST00000525284 DESP17661 470 aa16.14■□□□□ 0.17
LRRK1-202ENST00000525284 MATR3P43243 847 aaKnown RBP eCLIP16.14■□□□□ 0.17
LRRK1-202ENST00000525284 CFAP57Q96MR6 1250 aa16.14■□□□□ 0.17
LRRK1-202ENST00000525284 ATP2B2Q01814 1243 aa16.14■□□□□ 0.17
LRRK1-202ENST00000525284 EPB41L2O43491 1005 aaKnown RBP16.13■□□□□ 0.17
LRRK1-202ENST00000525284 SMC1AQ14683 1233 aaKnown RBP16.13■□□□□ 0.17
LRRK1-202ENST00000525284 MPHOSPH9Q99550 1183 aa16.13■□□□□ 0.17
LRRK1-202ENST00000525284 CUX2O14529 1486 aa16.13■□□□□ 0.17
LRRK1-202ENST00000525284 PDCP20941 246 aa16.13■□□□□ 0.17
LRRK1-202ENST00000525284 IFFO1Q0D2I5 559 aa16.13■□□□□ 0.17
LRRK1-202ENST00000525284 GRPEL1Q9HAV7 217 aa16.13■□□□□ 0.17
LRRK1-202ENST00000525284 ARHGAP29Q52LW3 1261 aa16.13■□□□□ 0.17
LRRK1-202ENST00000525284 RIC3Q7Z5B4 369 aa16.13■□□□□ 0.17
LRRK1-202ENST00000525284 JMYQ8N9B5 988 aa16.12■□□□□ 0.17
LRRK1-202ENST00000525284 SSBP05455 408 aaKnown RBP eCLIP16.12■□□□□ 0.17
LRRK1-202ENST00000525284 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
LRRK1-202ENST00000525284 RIPK4P57078 832 aa16.12■□□□□ 0.17
LRRK1-202ENST00000525284 EID1Q9Y6B2 187 aa16.12■□□□□ 0.17
LRRK1-202ENST00000525284 KIF3BO15066 747 aa16.12■□□□□ 0.17
LRRK1-202ENST00000525284 BMS1Q14692 1282 aaKnown RBP16.12■□□□□ 0.17
LRRK1-202ENST00000525284 GRIPAP1Q4V328 841 aa16.12■□□□□ 0.17
LRRK1-202ENST00000525284 ZFP91Q96JP5 570 aaPredicted RBP16.12■□□□□ 0.17
LRRK1-202ENST00000525284 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
LRRK1-202ENST00000525284 GSTTP1A0A1W2PQM5 241 aa16.11■□□□□ 0.17
LRRK1-202ENST00000525284 NUP155O75694 1391 aa16.11■□□□□ 0.17
LRRK1-202ENST00000525284 TBC1D2BQ9UPU7 963 aa16.11■□□□□ 0.17
LRRK1-202ENST00000525284 EIF5P55010 431 aaKnown RBP16.11■□□□□ 0.17
LRRK1-202ENST00000525284 PSMD1Q99460 953 aa16.11■□□□□ 0.17
LRRK1-202ENST00000525284 MICALCLQ6ZW33 695 aa16.1■□□□□ 0.17
LRRK1-202ENST00000525284 GTF2F1P35269 517 aaKnown RBP eCLIP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms