RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 SIN3AQ96ST3 1273 aa17.52■□□□□ 0.4
CHKA-203ENST00000525155 CCDC9Q9Y3X0 531 aaKnown RBP17.52■□□□□ 0.4
CHKA-203ENST00000525155 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.52■□□□□ 0.39
CHKA-203ENST00000525155 ACEP12821 1306 aa17.51■□□□□ 0.39
CHKA-203ENST00000525155 FAM98CQ17RN3 349 aaKnown RBP17.51■□□□□ 0.39
CHKA-203ENST00000525155 CCDC61Q9Y6R9 512 aa17.51■□□□□ 0.39
CHKA-203ENST00000525155 EIF3AQ14152 1382 aaKnown RBP17.51■□□□□ 0.39
CHKA-203ENST00000525155 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
CHKA-203ENST00000525155 CHRNA2Q15822 529 aa17.5■□□□□ 0.39
CHKA-203ENST00000525155 KRT27Q7Z3Y8 459 aa17.5■□□□□ 0.39
CHKA-203ENST00000525155 CCER1Q8TC90 406 aaPredicted RBP17.5■□□□□ 0.39
CHKA-203ENST00000525155 POLR3AO14802 1390 aaPredicted RBP17.5■□□□□ 0.39
CHKA-203ENST00000525155 ALS2Q96Q42 1657 aa17.49■□□□□ 0.39
CHKA-203ENST00000525155 SPATA31A5Q5VU36 1347 aa17.48■□□□□ 0.39
CHKA-203ENST00000525155 SPATA31A7Q8IWB4 1347 aa17.48■□□□□ 0.39
CHKA-203ENST00000525155 FAM182BQ5T319 152 aa17.48■□□□□ 0.39
CHKA-203ENST00000525155 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
CHKA-203ENST00000525155 ABCA3Q99758 1704 aa17.47■□□□□ 0.39
CHKA-203ENST00000525155 ZC3H6P61129 1189 aaKnown RBP17.47■□□□□ 0.39
CHKA-203ENST00000525155 CABP2Q9NPB3 220 aa17.47■□□□□ 0.39
CHKA-203ENST00000525155 ZRANB1Q9UGI0 708 aa17.47■□□□□ 0.39
CHKA-203ENST00000525155 KIAA0232Q92628 1395 aa17.47■□□□□ 0.39
CHKA-203ENST00000525155 ARHGEF28Q8N1W1 1705 aaKnown RBP17.47■□□□□ 0.39
CHKA-203ENST00000525155 PRDM11Q9NQV5 511 aa17.46■□□□□ 0.39
CHKA-203ENST00000525155 TIMELESSQ9UNS1 1208 aa17.45■□□□□ 0.38
CHKA-203ENST00000525155 PLCH1Q4KWH8 1693 aa17.45■□□□□ 0.38
CHKA-203ENST00000525155 BRWD3Q6RI45 1802 aa17.44■□□□□ 0.38
CHKA-203ENST00000525155 CENPJQ9HC77 1338 aaPredicted RBP17.44■□□□□ 0.38
CHKA-203ENST00000525155 NWD2Q9ULI1 1742 aa17.44■□□□□ 0.38
CHKA-203ENST00000525155 TONSLQ96HA7 1378 aa17.43■□□□□ 0.38
CHKA-203ENST00000525155 SPATA31A1Q5TZJ5 1347 aa17.43■□□□□ 0.38
CHKA-203ENST00000525155 NRAPQ86VF7 1730 aa17.42■□□□□ 0.38
CHKA-203ENST00000525155 ABTB2Q8N961 1025 aa17.42■□□□□ 0.38
CHKA-203ENST00000525155 CABP1Q9NZU7 370 aa17.42■□□□□ 0.38
CHKA-203ENST00000525155 SRPK2P78362 688 aaKnown RBP17.41■□□□□ 0.38
CHKA-203ENST00000525155 CRYBG1Q9Y4K1 1723 aa17.41■□□□□ 0.38
CHKA-203ENST00000525155 A0A0G2JS52 829 aa17.4■□□□□ 0.38
CHKA-203ENST00000525155 MYT1Q01538 1121 aa17.4■□□□□ 0.38
CHKA-203ENST00000525155 STRN4Q9NRL3 753 aa17.4■□□□□ 0.38
CHKA-203ENST00000525155 USP19O94966 1318 aa17.4■□□□□ 0.38
CHKA-203ENST00000525155 COL14A1Q05707 1796 aaKnown RBP17.39■□□□□ 0.37
CHKA-203ENST00000525155 GCP02774 474 aa17.39■□□□□ 0.37
CHKA-203ENST00000525155 LARP1Q6PKG0 1096 aaKnown RBP17.39■□□□□ 0.37
CHKA-203ENST00000525155 KIAA1210Q9ULL0 1709 aa17.38■□□□□ 0.37
CHKA-203ENST00000525155 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
CHKA-203ENST00000525155 EN1Q05925 392 aaPredicted RBP17.37■□□□□ 0.37
CHKA-203ENST00000525155 SSH2Q76I76 1423 aa17.37■□□□□ 0.37
CHKA-203ENST00000525155 CAMTA1Q9Y6Y1 1673 aa17.36■□□□□ 0.37
CHKA-203ENST00000525155 SF3B2Q13435 895 aaKnown RBP17.36■□□□□ 0.37
CHKA-203ENST00000525155 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
CHKA-203ENST00000525155 CPDO75976 1380 aa17.36■□□□□ 0.37
CHKA-203ENST00000525155 NLRP13Q86W25 1043 aa17.35■□□□□ 0.37
CHKA-203ENST00000525155 TOPAZ1Q8N9V7 1692 aa17.35■□□□□ 0.37
CHKA-203ENST00000525155 EVA1CP58658 441 aa17.34■□□□□ 0.37
CHKA-203ENST00000525155 BARGINQ6ZT62 677 aa17.34■□□□□ 0.37
CHKA-203ENST00000525155 THSD7AQ9UPZ6 1657 aa17.32■□□□□ 0.36
CHKA-203ENST00000525155 USP6P35125 1406 aa17.32■□□□□ 0.36
CHKA-203ENST00000525155 PSDA5PKW4 1024 aaPredicted RBP17.32■□□□□ 0.36
CHKA-203ENST00000525155 BAG6P46379 1132 aa17.32■□□□□ 0.36
CHKA-203ENST00000525155 CAMKK2Q96RR4 588 aa17.32■□□□□ 0.36
CHKA-203ENST00000525155 AXIN2Q9Y2T1 843 aa17.32■□□□□ 0.36
CHKA-203ENST00000525155 TRIM37O94972 964 aa17.31■□□□□ 0.36
CHKA-203ENST00000525155 NLRP6P59044 892 aa17.31■□□□□ 0.36
CHKA-203ENST00000525155 EZH2Q15910 746 aaKnown RBP17.31■□□□□ 0.36
CHKA-203ENST00000525155 PHRF1Q9P1Y6 1649 aaKnown RBP17.3■□□□□ 0.36
CHKA-203ENST00000525155 TCP11L2Q8N4U5 519 aa17.3■□□□□ 0.36
CHKA-203ENST00000525155 ITSN1Q15811 1721 aa17.3■□□□□ 0.36
CHKA-203ENST00000525155 EVC2Q86UK5 1308 aa17.29■□□□□ 0.36
CHKA-203ENST00000525155 NRKQ7Z2Y5 1582 aa17.29■□□□□ 0.36
CHKA-203ENST00000525155 FAM196AQ6ZSG2 479 aa17.29■□□□□ 0.36
CHKA-203ENST00000525155 BRD4O60885 1362 aaPredicted RBP17.28■□□□□ 0.36
CHKA-203ENST00000525155 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
CHKA-203ENST00000525155 TTC21BQ7Z4L5 1316 aa17.28■□□□□ 0.36
CHKA-203ENST00000525155 LMO7Q8WWI1 1683 aa17.27■□□□□ 0.36
CHKA-203ENST00000525155 DISP2A7MBM2 1401 aa17.27■□□□□ 0.35
CHKA-203ENST00000525155 ARHGEF25Q86VW2 580 aa17.26■□□□□ 0.35
CHKA-203ENST00000525155 AATKQ6ZMQ8 1374 aa17.26■□□□□ 0.35
CHKA-203ENST00000525155 COL5A2P05997 1499 aaPredicted RBP17.25■□□□□ 0.35
CHKA-203ENST00000525155 CPSF1Q10570 1443 aaKnown RBP17.25■□□□□ 0.35
CHKA-203ENST00000525155 ZBTB7CA1YPR0 619 aa17.25■□□□□ 0.35
CHKA-203ENST00000525155 PDE3BQ13370 1112 aa17.25■□□□□ 0.35
CHKA-203ENST00000525155 R3HDM1Q15032 1099 aaKnown RBP17.25■□□□□ 0.35
CHKA-203ENST00000525155 ZNF692Q9BU19 519 aaPredicted RBP17.25■□□□□ 0.35
CHKA-203ENST00000525155 THRAP3Q9Y2W1 955 aaKnown RBP17.25■□□□□ 0.35
CHKA-203ENST00000525155 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
CHKA-203ENST00000525155 APBA3O96018 575 aa17.24■□□□□ 0.35
CHKA-203ENST00000525155 PTF1AQ7RTS3 328 aa17.24■□□□□ 0.35
CHKA-203ENST00000525155 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
CHKA-203ENST00000525155 SLIT3O75094 1523 aa17.23■□□□□ 0.35
CHKA-203ENST00000525155 SOX12O15370 315 aa17.21■□□□□ 0.35
CHKA-203ENST00000525155 SLC12A5Q9H2X9 1139 aa17.21■□□□□ 0.35
CHKA-203ENST00000525155 CRB1P82279 1406 aa17.21■□□□□ 0.34
CHKA-203ENST00000525155 CARD11Q9BXL7 1154 aa17.2■□□□□ 0.34
CHKA-203ENST00000525155 CD163L1Q9NR16 1453 aa17.19■□□□□ 0.34
CHKA-203ENST00000525155 TOM1L2Q6ZVM7 507 aa17.19■□□□□ 0.34
CHKA-203ENST00000525155 COL18A1P39060 1754 aa17.18■□□□□ 0.34
CHKA-203ENST00000525155 PIK3C2AO00443 1686 aa17.18■□□□□ 0.34
CHKA-203ENST00000525155 MARCH10Q8NA82 808 aaPredicted RBP17.18■□□□□ 0.34
CHKA-203ENST00000525155 WDR17Q8IZU2 1322 aa17.18■□□□□ 0.34
CHKA-203ENST00000525155 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms