RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PRSS12P56730 875 aa12.21□□□□□ -0.45
NEDD8-203ENST00000524927 NEUROD2Q15784 382 aa12.21□□□□□ -0.45
NEDD8-203ENST00000524927 TJAP1Q5JTD0 557 aa12.21□□□□□ -0.45
NEDD8-203ENST00000524927 MROH2AA6NES4 1674 aa12.2□□□□□ -0.46
NEDD8-203ENST00000524927 BRPF1P55201 1214 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-203ENST00000524927 TMEM132AQ24JP5 1023 aa12.2□□□□□ -0.46
NEDD8-203ENST00000524927 ZMYM3Q14202 1370 aa12.19□□□□□ -0.46
NEDD8-203ENST00000524927 ZNF772Q68DY9 489 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-203ENST00000524927 CDK12Q9NYV4 1490 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-203ENST00000524927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.18□□□□□ -0.46
NEDD8-203ENST00000524927 NUTM2FA1L443 756 aa12.18□□□□□ -0.46
NEDD8-203ENST00000524927 OSBPP22059 807 aa12.18□□□□□ -0.46
NEDD8-203ENST00000524927 PPP4CP60510 307 aa12.18□□□□□ -0.46
NEDD8-203ENST00000524927 FAM135BQ49AJ0 1406 aa12.18□□□□□ -0.46
NEDD8-203ENST00000524927 NEURL4Q96JN8 1562 aa12.18□□□□□ -0.46
NEDD8-203ENST00000524927 ZNF518AQ6AHZ1 1483 aa12.17□□□□□ -0.46
NEDD8-203ENST00000524927 Q6ZNB5 142 aa12.17□□□□□ -0.46
NEDD8-203ENST00000524927 TATDN2Q93075 761 aa12.17□□□□□ -0.46
NEDD8-203ENST00000524927 DIP2CQ9Y2E4 1556 aa12.17□□□□□ -0.46
NEDD8-203ENST00000524927 SETBP1Q9Y6X0 1596 aa12.17□□□□□ -0.46
NEDD8-203ENST00000524927 PLEKHD1A6NEE1 506 aa12.16□□□□□ -0.46
NEDD8-203ENST00000524927 AK7Q96M32 723 aa12.16□□□□□ -0.46
NEDD8-203ENST00000524927 POLR1AO95602 1720 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-203ENST00000524927 SYNMO15061 1565 aa12.15□□□□□ -0.46
NEDD8-203ENST00000524927 ZNF516Q92618 1163 aa12.15□□□□□ -0.46
NEDD8-203ENST00000524927 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
NEDD8-203ENST00000524927 KDM5CP41229 1560 aa12.14□□□□□ -0.47
NEDD8-203ENST00000524927 PLCH2O75038 1416 aa12.14□□□□□ -0.47
NEDD8-203ENST00000524927 RXRBP28702 533 aa12.14□□□□□ -0.47
NEDD8-203ENST00000524927 MTRQ99707 1265 aa12.13□□□□□ -0.47
NEDD8-203ENST00000524927 A2ML1A8K2U0 1454 aa12.13□□□□□ -0.47
NEDD8-203ENST00000524927 NUDT18Q6ZVK8 323 aa12.12□□□□□ -0.47
NEDD8-203ENST00000524927 CTTNBP2Q8WZ74 1663 aa12.12□□□□□ -0.47
NEDD8-203ENST00000524927 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
NEDD8-203ENST00000524927 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-203ENST00000524927 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
NEDD8-203ENST00000524927 APLP1P51693 650 aa12.1□□□□□ -0.47
NEDD8-203ENST00000524927 AFAP1Q8N556 730 aa12.1□□□□□ -0.47
NEDD8-203ENST00000524927 GTF3C3Q9Y5Q9 886 aa12.1□□□□□ -0.47
NEDD8-203ENST00000524927 MED14O60244 1454 aa12.09□□□□□ -0.47
NEDD8-203ENST00000524927 MLH3Q9UHC1 1453 aa12.09□□□□□ -0.47
NEDD8-203ENST00000524927 ABCA6Q8N139 1617 aa12.09□□□□□ -0.47
NEDD8-203ENST00000524927 EFCAB2Q5VUJ9 269 aa12.09□□□□□ -0.47
NEDD8-203ENST00000524927 PPP1R18Q6NYC8 613 aa12.09□□□□□ -0.47
NEDD8-203ENST00000524927 ANKLE2Q86XL3 938 aa12.09□□□□□ -0.47
NEDD8-203ENST00000524927 NKX2-3Q8TAU0 364 aa12.09□□□□□ -0.47
NEDD8-203ENST00000524927 JCADQ9P266 1359 aa12.08□□□□□ -0.48
NEDD8-203ENST00000524927 CDK13Q14004 1512 aaKnown RBP12.08□□□□□ -0.48
NEDD8-203ENST00000524927 GPR37O15354 613 aa12.08□□□□□ -0.48
NEDD8-203ENST00000524927 NUP153P49790 1475 aaKnown RBP12.08□□□□□ -0.48
NEDD8-203ENST00000524927 NPHP4O75161 1426 aaPredicted RBP12.07□□□□□ -0.48
NEDD8-203ENST00000524927 TTC13Q8NBP0 860 aa12.07□□□□□ -0.48
NEDD8-203ENST00000524927 PRKD2Q9BZL6 878 aa12.07□□□□□ -0.48
NEDD8-203ENST00000524927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.06□□□□□ -0.48
NEDD8-203ENST00000524927 STRCP1A6NGW2 1772 aa12.06□□□□□ -0.48
NEDD8-203ENST00000524927 GFRA3O60609 400 aa12.06□□□□□ -0.48
NEDD8-203ENST00000524927 FCHSD2O94868 740 aa12.06□□□□□ -0.48
NEDD8-203ENST00000524927 LAPTM4AQ15012 233 aa12.06□□□□□ -0.48
NEDD8-203ENST00000524927 NBPF26B4DH59 902 aa12.05□□□□□ -0.48
NEDD8-203ENST00000524927 IL21Q9HBE4 155 aa12.05□□□□□ -0.48
NEDD8-203ENST00000524927 LRP5O75197 1615 aa12.04□□□□□ -0.48
NEDD8-203ENST00000524927 TRIM66O15016 1216 aa12.04□□□□□ -0.48
NEDD8-203ENST00000524927 GNPATO15228 680 aa12.04□□□□□ -0.48
NEDD8-203ENST00000524927 PADI6Q6TGC4 694 aa12.04□□□□□ -0.48
NEDD8-203ENST00000524927 DEPDC5O75140 1603 aa12.04□□□□□ -0.48
NEDD8-203ENST00000524927 RNF40O75150 1001 aa12.03□□□□□ -0.48
NEDD8-203ENST00000524927 HIC1Q14526 733 aa12.03□□□□□ -0.48
NEDD8-203ENST00000524927 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
NEDD8-203ENST00000524927 MINK1Q8N4C8 1332 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-203ENST00000524927 SWT1Q5T5J6 900 aaKnown RBP12.02□□□□□ -0.49
NEDD8-203ENST00000524927 MEX3CQ5U5Q3 659 aaKnown RBP12.02□□□□□ -0.49
NEDD8-203ENST00000524927 YY1P25490 414 aa12.01□□□□□ -0.49
NEDD8-203ENST00000524927 MAP2K5Q13163 448 aa12.01□□□□□ -0.49
NEDD8-203ENST00000524927 ATAD2Q6PL18 1390 aa12.01□□□□□ -0.49
NEDD8-203ENST00000524927 LRP6O75581 1613 aa12□□□□□ -0.49
NEDD8-203ENST00000524927 ROBO1Q9Y6N7 1651 aa12□□□□□ -0.49
NEDD8-203ENST00000524927 PDE4DQ08499 809 aa12□□□□□ -0.49
NEDD8-203ENST00000524927 GPBP1L1Q9HC44 474 aaPredicted RBP12□□□□□ -0.49
NEDD8-203ENST00000524927 IQGAP1P46940 1657 aa12□□□□□ -0.49
NEDD8-203ENST00000524927 CLTCQ00610 1675 aaKnown RBP12□□□□□ -0.49
NEDD8-203ENST00000524927 NUTM2BA6NNL0 878 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-203ENST00000524927 NUTM2EB1AL46 878 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-203ENST00000524927 NUTM2DQ5VT03 806 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-203ENST00000524927 TRAF7Q6Q0C0 670 aa11.99□□□□□ -0.49
NEDD8-203ENST00000524927 NUTM2AQ8IVF1 878 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-203ENST00000524927 THEMISQ8N1K5 641 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-203ENST00000524927 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.99□□□□□ -0.49
NEDD8-203ENST00000524927 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
NEDD8-203ENST00000524927 RGS12O14924 1447 aa11.99□□□□□ -0.49
NEDD8-203ENST00000524927 ABCC1P33527 1531 aa11.98□□□□□ -0.49
NEDD8-203ENST00000524927 KDM5DQ9BY66 1539 aa11.98□□□□□ -0.49
NEDD8-203ENST00000524927 IRF6O14896 467 aa11.98□□□□□ -0.49
NEDD8-203ENST00000524927 COPS2P61201 443 aa11.98□□□□□ -0.49
NEDD8-203ENST00000524927 PTGDRQ13258 359 aa11.98□□□□□ -0.49
NEDD8-203ENST00000524927 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
NEDD8-203ENST00000524927 LRRC9Q6ZRR7 1453 aa11.97□□□□□ -0.49
NEDD8-203ENST00000524927 FECHP22830 423 aa11.97□□□□□ -0.49
NEDD8-203ENST00000524927 EYA1Q99502 592 aa11.97□□□□□ -0.49
NEDD8-203ENST00000524927 FGD6Q6ZV73 1430 aa11.96□□□□□ -0.49
NEDD8-203ENST00000524927 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms