RNA–Protein interactions for RNA: ENST00000524826.5

ME3-203, Transcript of malic enzyme 3, humanhuman

TSL 1 (best)

Gene ME3, Length 2,069 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-203ENST00000524826 MSH5O43196 834 aa28.14■■■□□ 2.1
ME3-203ENST00000524826 C14orf37Q86TY3 774 aa28.14■■■□□ 2.1
ME3-203ENST00000524826 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.14■■■□□ 2.09
ME3-203ENST00000524826 POLR3AO14802 1390 aaPredicted RBP28.12■■■□□ 2.09
ME3-203ENST00000524826 NRKQ7Z2Y5 1582 aa28.11■■■□□ 2.09
ME3-203ENST00000524826 USP6P35125 1406 aa28.1■■■□□ 2.09
ME3-203ENST00000524826 TNNT2P45379 298 aaPredicted RBP28.1■■■□□ 2.09
ME3-203ENST00000524826 PMFBP1Q8TBY8 1022 aa28.1■■■□□ 2.09
ME3-203ENST00000524826 NCOA3Q9Y6Q9 1424 aa28.09■■■□□ 2.09
ME3-203ENST00000524826 TMEM94Q12767 1356 aa28.08■■■□□ 2.09
ME3-203ENST00000524826 NGDNQ8NEJ9 315 aaKnown RBP28.06■■■□□ 2.08
ME3-203ENST00000524826 C19orf44Q9H6X5 657 aa28.06■■■□□ 2.08
ME3-203ENST00000524826 SMG6Q86US8 1419 aaKnown RBP28.06■■■□□ 2.08
ME3-203ENST00000524826 NME9Q86XW9 330 aa28.05■■■□□ 2.08
ME3-203ENST00000524826 TTC21BQ7Z4L5 1316 aa28.05■■■□□ 2.08
ME3-203ENST00000524826 SSH2Q76I76 1423 aa28.05■■■□□ 2.08
ME3-203ENST00000524826 PHF8Q9UPP1 1060 aa28.01■■■□□ 2.07
ME3-203ENST00000524826 MTHFSP49914 203 aa28.01■■■□□ 2.07
ME3-203ENST00000524826 DMRT2Q9Y5R5 561 aa28.01■■■□□ 2.07
ME3-203ENST00000524826 DCCP43146 1447 aa28.01■■■□□ 2.07
ME3-203ENST00000524826 INSRP06213 1382 aa28■■■□□ 2.07
ME3-203ENST00000524826 ZNF335Q9H4Z2 1342 aaPredicted RBP28■■■□□ 2.07
ME3-203ENST00000524826 TTC21AQ8NDW8 1320 aa27.98■■■□□ 2.07
ME3-203ENST00000524826 ZRANB1Q9UGI0 708 aa27.98■■■□□ 2.07
ME3-203ENST00000524826 ESCO1Q5FWF5 840 aa27.98■■■□□ 2.07
ME3-203ENST00000524826 COG3Q96JB2 828 aa27.98■■■□□ 2.07
ME3-203ENST00000524826 WDR43Q15061 677 aaKnown RBP eCLIP27.96■■■□□ 2.07
ME3-203ENST00000524826 LRRC7Q96NW7 1537 aa27.96■■■□□ 2.07
ME3-203ENST00000524826 B4GALNT3Q6L9W6 998 aa27.96■■■□□ 2.07
ME3-203ENST00000524826 XIRP1Q702N8 1843 aaKnown RBP27.95■■■□□ 2.07
ME3-203ENST00000524826 C1orf167Q5SNV9 1468 aa27.95■■■□□ 2.07
ME3-203ENST00000524826 ATF3P18847 181 aa27.95■■■□□ 2.07
ME3-203ENST00000524826 RNF123Q5XPI4 1314 aa27.95■■■□□ 2.06
ME3-203ENST00000524826 ADAMTS8Q9UP79 889 aa27.95■■■□□ 2.06
ME3-203ENST00000524826 OVOS2A0A0J9YW53 1432 aa27.95■■■□□ 2.06
ME3-203ENST00000524826 BLMP54132 1417 aaPredicted RBP27.95■■■□□ 2.06
ME3-203ENST00000524826 OVOS2Q6IE36 1432 aa27.95■■■□□ 2.06
ME3-203ENST00000524826 CFAP53Q96M91 514 aa27.94■■■□□ 2.06
ME3-203ENST00000524826 MSH6P52701 1360 aa27.93■■■□□ 2.06
ME3-203ENST00000524826 MST1RQ04912 1400 aa27.93■■■□□ 2.06
ME3-203ENST00000524826 ORAI2Q96SN7 254 aa27.93■■■□□ 2.06
ME3-203ENST00000524826 NUDCQ9Y266 331 aa27.93■■■□□ 2.06
ME3-203ENST00000524826 AATKQ6ZMQ8 1374 aa27.92■■■□□ 2.06
ME3-203ENST00000524826 SHPRHQ149N8 1683 aa27.92■■■□□ 2.06
ME3-203ENST00000524826 CADPS2Q86UW7 1296 aa27.91■■■□□ 2.06
ME3-203ENST00000524826 PIK3C2AO00443 1686 aa27.89■■■□□ 2.06
ME3-203ENST00000524826 KIF1AQ12756 1690 aa27.89■■■□□ 2.06
ME3-203ENST00000524826 USP31Q70CQ4 1352 aa27.88■■■□□ 2.05
ME3-203ENST00000524826 POLKQ9UBT6 870 aa27.88■■■□□ 2.05
ME3-203ENST00000524826 FBLN1P23142 703 aa27.88■■■□□ 2.05
ME3-203ENST00000524826 COL3A1P02461 1466 aaPredicted RBP27.87■■■□□ 2.05
ME3-203ENST00000524826 PNPLA6Q8IY17 1366 aa27.87■■■□□ 2.05
ME3-203ENST00000524826 MAP2P11137 1827 aaKnown RBP27.86■■■□□ 2.05
ME3-203ENST00000524826 PSME1Q06323 249 aa27.85■■■□□ 2.05
ME3-203ENST00000524826 USP54Q70EL1 1684 aa27.83■■■□□ 2.05
ME3-203ENST00000524826 FOXO3O43524 673 aa27.83■■■□□ 2.05
ME3-203ENST00000524826 PAK3O75914 559 aaPredicted RBP27.83■■■□□ 2.05
ME3-203ENST00000524826 ERICH6Q7L0X2 663 aa27.83■■■□□ 2.05
ME3-203ENST00000524826 EMILIN1Q9Y6C2 1016 aa27.82■■■□□ 2.04
ME3-203ENST00000524826 CDK12Q9NYV4 1490 aaPredicted RBP27.81■■■□□ 2.04
ME3-203ENST00000524826 SENP3-EIF4A1A0A087X0R7 540 aa27.8■■■□□ 2.04
ME3-203ENST00000524826 ABTB2Q8N961 1025 aa27.8■■■□□ 2.04
ME3-203ENST00000524826 NLRP6P59044 892 aa27.8■■■□□ 2.04
ME3-203ENST00000524826 PPM1GO15355 546 aaPredicted RBP27.79■■■□□ 2.04
ME3-203ENST00000524826 RRS1Q15050 365 aaKnown RBP27.79■■■□□ 2.04
ME3-203ENST00000524826 MARF1Q9Y4F3 1742 aaKnown RBP27.79■■■□□ 2.04
ME3-203ENST00000524826 DIAPH1O60610 1272 aaKnown RBP27.77■■■□□ 2.04
ME3-203ENST00000524826 TRPM3Q9HCF6 1732 aaPredicted RBP27.76■■■□□ 2.03
ME3-203ENST00000524826 XPCQ01831 940 aaPredicted RBP27.75■■■□□ 2.03
ME3-203ENST00000524826 NUTM2GQ5VZR2 741 aa27.75■■■□□ 2.03
ME3-203ENST00000524826 CCDC146Q8IYE0 955 aa27.75■■■□□ 2.03
ME3-203ENST00000524826 KRT28Q7Z3Y7 464 aa27.74■■■□□ 2.03
ME3-203ENST00000524826 BCL11AQ9H165 835 aa27.74■■■□□ 2.03
ME3-203ENST00000524826 U2AF1L5P0DN76 240 aaPredicted RBP27.73■■■□□ 2.03
ME3-203ENST00000524826 U2AF1Q01081 240 aaKnown RBP eCLIP27.73■■■□□ 2.03
ME3-203ENST00000524826 SOX12O15370 315 aa27.72■■■□□ 2.03
ME3-203ENST00000524826 U2SURPO15042 1029 aaKnown RBP27.71■■■□□ 2.03
ME3-203ENST00000524826 SALL2Q9Y467 1007 aaPredicted RBP27.71■■■□□ 2.03
ME3-203ENST00000524826 PEAK1Q9H792 1746 aa27.7■■■□□ 2.02
ME3-203ENST00000524826 NPHP3Q7Z494 1330 aa27.7■■■□□ 2.02
ME3-203ENST00000524826 SLAIN2Q9P270 581 aa27.69■■■□□ 2.02
ME3-203ENST00000524826 MAP3K19Q56UN5 1328 aa27.69■■■□□ 2.02
ME3-203ENST00000524826 LTBP4Q8N2S1 1624 aa27.68■■■□□ 2.02
ME3-203ENST00000524826 BRINP3Q76B58 766 aa27.68■■■□□ 2.02
ME3-203ENST00000524826 RUNDC1Q96C34 613 aa27.68■■■□□ 2.02
ME3-203ENST00000524826 CCDC136Q96JN2 1154 aa27.68■■■□□ 2.02
ME3-203ENST00000524826 APAF1O14727 1248 aa27.67■■■□□ 2.02
ME3-203ENST00000524826 IL13P35225 146 aa27.67■■■□□ 2.02
ME3-203ENST00000524826 DDX17Q92841 729 aaKnown RBP27.66■■■□□ 2.02
ME3-203ENST00000524826 SBNO1A3KN83 1393 aa27.66■■■□□ 2.02
ME3-203ENST00000524826 ALS2Q96Q42 1657 aa27.66■■■□□ 2.02
ME3-203ENST00000524826 PXDNQ92626 1479 aa27.65■■■□□ 2.02
ME3-203ENST00000524826 FLT4P35916 1363 aa27.64■■■□□ 2.02
ME3-203ENST00000524826 IQSEC2Q5JU85 1478 aa27.64■■■□□ 2.01
ME3-203ENST00000524826 NFAT5O94916 1531 aa27.63■■■□□ 2.01
ME3-203ENST00000524826 KIF24Q5T7B8 1368 aa27.63■■■□□ 2.01
ME3-203ENST00000524826 SLIT3O75094 1523 aa27.62■■■□□ 2.01
ME3-203ENST00000524826 PDE3BQ13370 1112 aa27.62■■■□□ 2.01
ME3-203ENST00000524826 LMOD2Q6P5Q4 547 aa27.62■■■□□ 2.01
ME3-203ENST00000524826 HSP90AB2PQ58FF8 381 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms