RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 BCL11BQ9C0K0 894 aaPredicted RBP12.75□□□□□ -0.37
PUM1-213ENST00000524516 GPBP1L1Q9HC44 474 aaPredicted RBP12.75□□□□□ -0.37
PUM1-213ENST00000524516 ANKRD50Q9ULJ7 1429 aa12.74□□□□□ -0.37
PUM1-213ENST00000524516 PRAG1Q86YV5 1406 aa12.73□□□□□ -0.37
PUM1-213ENST00000524516 ATP10DQ9P241 1426 aa12.73□□□□□ -0.37
PUM1-213ENST00000524516 ARXQ96QS3 562 aa12.73□□□□□ -0.37
PUM1-213ENST00000524516 MTFR1LQ9H019 292 aa12.73□□□□□ -0.37
PUM1-213ENST00000524516 RGPD3A6NKT7 1758 aaPredicted RBP12.73□□□□□ -0.37
PUM1-213ENST00000524516 RGPD4Q7Z3J3 1758 aa12.73□□□□□ -0.37
PUM1-213ENST00000524516 SPATA31A1Q5TZJ5 1347 aa12.72□□□□□ -0.37
PUM1-213ENST00000524516 KLHL34Q8N239 644 aa12.72□□□□□ -0.37
PUM1-213ENST00000524516 MAP3K5Q99683 1374 aa12.71□□□□□ -0.37
PUM1-213ENST00000524516 USP35Q9P2H5 1018 aa12.71□□□□□ -0.37
PUM1-213ENST00000524516 SBNO1A3KN83 1393 aa12.7□□□□□ -0.38
PUM1-213ENST00000524516 APLP1P51693 650 aa12.7□□□□□ -0.38
PUM1-213ENST00000524516 ZNF526Q8TF50 670 aaPredicted RBP12.7□□□□□ -0.38
PUM1-213ENST00000524516 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
PUM1-213ENST00000524516 STRN4Q9NRL3 753 aa12.69□□□□□ -0.38
PUM1-213ENST00000524516 STK32BQ9NY57 414 aa12.69□□□□□ -0.38
PUM1-213ENST00000524516 TECPR2O15040 1411 aa12.69□□□□□ -0.38
PUM1-213ENST00000524516 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
PUM1-213ENST00000524516 PRDM11Q9NQV5 511 aa12.68□□□□□ -0.38
PUM1-213ENST00000524516 PHF8Q9UPP1 1060 aa12.68□□□□□ -0.38
PUM1-213ENST00000524516 PLSCR1O15162 318 aa12.66□□□□□ -0.38
PUM1-213ENST00000524516 KANK4Q5T7N3 995 aaPredicted RBP12.65□□□□□ -0.38
PUM1-213ENST00000524516 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
PUM1-213ENST00000524516 NRXN1Q9ULB1 1477 aa12.64□□□□□ -0.39
PUM1-213ENST00000524516 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
PUM1-213ENST00000524516 GRIN3BO60391 1043 aa12.63□□□□□ -0.39
PUM1-213ENST00000524516 SLC15A2Q16348 729 aa12.63□□□□□ -0.39
PUM1-213ENST00000524516 BARGINQ6ZT62 677 aa12.63□□□□□ -0.39
PUM1-213ENST00000524516 WAPLQ7Z5K2 1190 aa12.63□□□□□ -0.39
PUM1-213ENST00000524516 DNAJC5GQ8N7S2 189 aa12.63□□□□□ -0.39
PUM1-213ENST00000524516 RGPD8O14715 1765 aaPredicted RBP12.63□□□□□ -0.39
PUM1-213ENST00000524516 GOLGB1Q14789 3259 aaKnown RBP12.63□□□□□ -0.39
PUM1-213ENST00000524516 OVOS2A0A0G2JMS6 1433 aa12.62□□□□□ -0.39
PUM1-213ENST00000524516 OVOS2A0A0J9YW53 1432 aa12.62□□□□□ -0.39
PUM1-213ENST00000524516 OVOS2Q6IE36 1432 aa12.62□□□□□ -0.39
PUM1-213ENST00000524516 WWC3Q9ULE0 1092 aa12.62□□□□□ -0.39
PUM1-213ENST00000524516 STK26Q9P289 416 aa12.61□□□□□ -0.39
PUM1-213ENST00000524516 IFT172Q9UG01 1749 aa12.61□□□□□ -0.39
PUM1-213ENST00000524516 EVA1CP58658 441 aa12.6□□□□□ -0.39
PUM1-213ENST00000524516 CHRNA2Q15822 529 aa12.6□□□□□ -0.39
PUM1-213ENST00000524516 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
PUM1-213ENST00000524516 AATKQ6ZMQ8 1374 aa12.59□□□□□ -0.39
PUM1-213ENST00000524516 TCP11L2Q8N4U5 519 aa12.59□□□□□ -0.39
PUM1-213ENST00000524516 KIF1BO60333 1816 aa12.59□□□□□ -0.39
PUM1-213ENST00000524516 NUP155O75694 1391 aa12.58□□□□□ -0.4
PUM1-213ENST00000524516 KIAA0232Q92628 1395 aa12.58□□□□□ -0.4
PUM1-213ENST00000524516 ALS2Q96Q42 1657 aa12.58□□□□□ -0.4
PUM1-213ENST00000524516 YBX3P16989 372 aaKnown RBP eCLIP12.58□□□□□ -0.42e-13■■■□□ 15.9
PUM1-213ENST00000524516 POLD1P28340 1107 aa12.58□□□□□ -0.4
PUM1-213ENST00000524516 TXNRD1Q16881 649 aa12.58□□□□□ -0.4
PUM1-213ENST00000524516 SSH2Q76I76 1423 aa12.58□□□□□ -0.4
PUM1-213ENST00000524516 PROM2Q8N271 834 aa12.58□□□□□ -0.4
PUM1-213ENST00000524516 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.4
PUM1-213ENST00000524516 PMFBP1Q8TBY8 1022 aa12.58□□□□□ -0.4
PUM1-213ENST00000524516 TRPM3Q9HCF6 1732 aaPredicted RBP12.58□□□□□ -0.4
PUM1-213ENST00000524516 SBF2Q86WG5 1849 aa12.58□□□□□ -0.4
PUM1-213ENST00000524516 PLEKHH1Q9ULM0 1364 aa12.57□□□□□ -0.4
PUM1-213ENST00000524516 WDR90Q96KV7 1748 aa12.57□□□□□ -0.4
PUM1-213ENST00000524516 PARP4Q9UKK3 1724 aaKnown RBP12.57□□□□□ -0.4
PUM1-213ENST00000524516 CRYBG1Q9Y4K1 1723 aa12.57□□□□□ -0.4
PUM1-213ENST00000524516 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
PUM1-213ENST00000524516 PEAK1Q9H792 1746 aa12.57□□□□□ -0.4
PUM1-213ENST00000524516 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
PUM1-213ENST00000524516 KLRG1Q96E93 195 aa12.56□□□□□ -0.4
PUM1-213ENST00000524516 ADCY9O60503 1353 aa12.56□□□□□ -0.4
PUM1-213ENST00000524516 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
PUM1-213ENST00000524516 PTF1AQ7RTS3 328 aa12.55□□□□□ -0.4
PUM1-213ENST00000524516 KIF3CO14782 793 aa12.54□□□□□ -0.4
PUM1-213ENST00000524516 LARP1Q6PKG0 1096 aaKnown RBP12.54□□□□□ -0.4
PUM1-213ENST00000524516 JMYQ8N9B5 988 aa12.54□□□□□ -0.4
PUM1-213ENST00000524516 KNDC1Q76NI1 1749 aa12.54□□□□□ -0.4
PUM1-213ENST00000524516 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
PUM1-213ENST00000524516 ATP7BP35670 1465 aa12.53□□□□□ -0.4
PUM1-213ENST00000524516 ZC3H6P61129 1189 aaKnown RBP12.52□□□□□ -0.41
PUM1-213ENST00000524516 FAM50AQ14320 339 aaKnown RBP12.52□□□□□ -0.41
PUM1-213ENST00000524516 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.41
PUM1-213ENST00000524516 LRRC37A3O60309 1634 aa12.51□□□□□ -0.41
PUM1-213ENST00000524516 VPS8Q8N3P4 1428 aa12.51□□□□□ -0.41
PUM1-213ENST00000524516 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
PUM1-213ENST00000524516 TOMM70O94826 608 aa12.5□□□□□ -0.41
PUM1-213ENST00000524516 HTRA3P83110 453 aa12.5□□□□□ -0.41
PUM1-213ENST00000524516 PPLO60437 1756 aa12.49□□□□□ -0.41
PUM1-213ENST00000524516 DDB1Q16531 1140 aa12.49□□□□□ -0.41
PUM1-213ENST00000524516 ABCC11Q96J66 1382 aa12.48□□□□□ -0.41
PUM1-213ENST00000524516 RPGRIP1LQ68CZ1 1315 aa12.48□□□□□ -0.41
PUM1-213ENST00000524516 ACIN1Q9UKV3 1341 aaKnown RBP12.48□□□□□ -0.41
PUM1-213ENST00000524516 AKAP12Q02952 1782 aa12.47□□□□□ -0.41
PUM1-213ENST00000524516 ANKARQ7Z5J8 1434 aa12.46□□□□□ -0.41
PUM1-213ENST00000524516 HSPA1AP0DMV8 641 aaKnown RBP12.46□□□□□ -0.41
PUM1-213ENST00000524516 HSPA1BP0DMV9 641 aaKnown RBP12.46□□□□□ -0.41
PUM1-213ENST00000524516 FAM161AQ3B820 660 aa12.46□□□□□ -0.41
PUM1-213ENST00000524516 TMEM132EQ6IEE7 984 aa12.46□□□□□ -0.41
PUM1-213ENST00000524516 SLC16A10Q8TF71 515 aa12.46□□□□□ -0.41
PUM1-213ENST00000524516 PAPPAQ13219 1627 aa12.46□□□□□ -0.41
PUM1-213ENST00000524516 TNS2Q63HR2 1409 aa12.45□□□□□ -0.42
PUM1-213ENST00000524516 SAFB2Q14151 953 aaKnown RBP eCLIP12.45□□□□□ -0.42
PUM1-213ENST00000524516 ZNF827Q17R98 1081 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms