RNA–Protein interactions for RNA: ENST00000524500.5

CTSB-206, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-206ENST00000524500 QRICH2Q9H0J4 1663 aa26.9■■□□□ 1.9
CTSB-206ENST00000524500 UPF1Q92900 1129 aaKnown RBP eCLIP26.9■■□□□ 1.9
CTSB-206ENST00000524500 EVC2Q86UK5 1308 aa26.89■■□□□ 1.89
CTSB-206ENST00000524500 TOPAZ1Q8N9V7 1692 aa26.89■■□□□ 1.89
CTSB-206ENST00000524500 ABCA3Q99758 1704 aa26.87■■□□□ 1.89
CTSB-206ENST00000524500 PPIP5K1Q6PFW1 1433 aa26.87■■□□□ 1.89
CTSB-206ENST00000524500 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.87■■□□□ 1.89
CTSB-206ENST00000524500 FAM83GA6ND36 823 aa26.86■■□□□ 1.89
CTSB-206ENST00000524500 CARD11Q9BXL7 1154 aa26.84■■□□□ 1.89
CTSB-206ENST00000524500 VPS72Q15906 364 aa26.83■■□□□ 1.89
CTSB-206ENST00000524500 CCDC9Q9Y3X0 531 aaKnown RBP26.82■■□□□ 1.88
CTSB-206ENST00000524500 ATAD2Q6PL18 1390 aa26.82■■□□□ 1.88
CTSB-206ENST00000524500 RALGAPBQ86X10 1494 aa26.81■■□□□ 1.88
CTSB-206ENST00000524500 ABTB2Q8N961 1025 aa26.81■■□□□ 1.88
CTSB-206ENST00000524500 CABP1Q9NZU7 370 aa26.81■■□□□ 1.88
CTSB-206ENST00000524500 NWD2Q9ULI1 1742 aa26.81■■□□□ 1.88
CTSB-206ENST00000524500 PLCH1Q4KWH8 1693 aa26.8■■□□□ 1.88
CTSB-206ENST00000524500 NUTM2GQ5VZR2 741 aa26.8■■□□□ 1.88
CTSB-206ENST00000524500 PRDM11Q9NQV5 511 aa26.79■■□□□ 1.88
CTSB-206ENST00000524500 BTG4Q9NY30 223 aa26.79■■□□□ 1.88
CTSB-206ENST00000524500 BRD4O60885 1362 aaPredicted RBP26.79■■□□□ 1.88
CTSB-206ENST00000524500 COL14A1Q05707 1796 aaKnown RBP26.76■■□□□ 1.87
CTSB-206ENST00000524500 GLI3P10071 1580 aa26.75■■□□□ 1.87
CTSB-206ENST00000524500 CRYBG1Q9Y4K1 1723 aa26.74■■□□□ 1.87
CTSB-206ENST00000524500 NLRP13Q86W25 1043 aa26.74■■□□□ 1.87
CTSB-206ENST00000524500 KIAA0232Q92628 1395 aa26.73■■□□□ 1.87
CTSB-206ENST00000524500 SBNO2Q9Y2G9 1366 aa26.73■■□□□ 1.87
CTSB-206ENST00000524500 ZC3H6P61129 1189 aaKnown RBP26.72■■□□□ 1.87
CTSB-206ENST00000524500 USP6P35125 1406 aa26.72■■□□□ 1.87
CTSB-206ENST00000524500 ZNF692Q9BU19 519 aaPredicted RBP26.71■■□□□ 1.87
CTSB-206ENST00000524500 SEPT12Q8IYM1 358 aa26.7■■□□□ 1.86
CTSB-206ENST00000524500 PHRF1Q9P1Y6 1649 aaKnown RBP26.69■■□□□ 1.86
CTSB-206ENST00000524500 ONECUT3O60422 494 aaPredicted RBP26.69■■□□□ 1.86
CTSB-206ENST00000524500 CHRNA2Q15822 529 aa26.69■■□□□ 1.86
CTSB-206ENST00000524500 USP19O94966 1318 aa26.68■■□□□ 1.86
CTSB-206ENST00000524500 NRAPQ86VF7 1730 aa26.68■■□□□ 1.86
CTSB-206ENST00000524500 A0A0G2JS52 829 aa26.67■■□□□ 1.86
CTSB-206ENST00000524500 MYT1Q01538 1121 aa26.67■■□□□ 1.86
CTSB-206ENST00000524500 GCP02774 474 aa26.66■■□□□ 1.86
CTSB-206ENST00000524500 NLRP6P59044 892 aa26.66■■□□□ 1.86
CTSB-206ENST00000524500 CCDC125Q86Z20 511 aa26.65■■□□□ 1.86
CTSB-206ENST00000524500 PCGF6Q9BYE7 350 aa26.65■■□□□ 1.86
CTSB-206ENST00000524500 SPATA31A5Q5VU36 1347 aa26.65■■□□□ 1.86
CTSB-206ENST00000524500 SPATA31A7Q8IWB4 1347 aa26.65■■□□□ 1.86
CTSB-206ENST00000524500 CPDO75976 1380 aa26.64■■□□□ 1.86
CTSB-206ENST00000524500 FAM98CQ17RN3 349 aaKnown RBP26.64■■□□□ 1.86
CTSB-206ENST00000524500 EVA1CP58658 441 aa26.63■■□□□ 1.85
CTSB-206ENST00000524500 STRN4Q9NRL3 753 aa26.63■■□□□ 1.85
CTSB-206ENST00000524500 SSH2Q76I76 1423 aa26.63■■□□□ 1.85
CTSB-206ENST00000524500 NRKQ7Z2Y5 1582 aa26.63■■□□□ 1.85
CTSB-206ENST00000524500 CLSPNQ9HAW4 1339 aa26.62■■□□□ 1.85
CTSB-206ENST00000524500 SLC24A1O60721 1099 aa26.61■■□□□ 1.85
CTSB-206ENST00000524500 KRT27Q7Z3Y8 459 aa26.61■■□□□ 1.85
CTSB-206ENST00000524500 TTC21BQ7Z4L5 1316 aa26.61■■□□□ 1.85
CTSB-206ENST00000524500 EP400Q96L91 3159 aa26.6■■□□□ 1.85
CTSB-206ENST00000524500 KTN1Q86UP2 1357 aaKnown RBP26.6■■□□□ 1.85
CTSB-206ENST00000524500 TMC1Q8TDI8 760 aa26.6■■□□□ 1.85
CTSB-206ENST00000524500 TTC21AQ8NDW8 1320 aa26.6■■□□□ 1.85
CTSB-206ENST00000524500 CPSF1Q10570 1443 aaKnown RBP26.59■■□□□ 1.85
CTSB-206ENST00000524500 TIMELESSQ9UNS1 1208 aa26.59■■□□□ 1.85
CTSB-206ENST00000524500 ST20-MTHFSA0A0A6YYL1 179 aa26.58■■□□□ 1.85
CTSB-206ENST00000524500 PUS7Q96PZ0 661 aaKnown RBP26.58■■□□□ 1.85
CTSB-206ENST00000524500 SPATA31A1Q5TZJ5 1347 aa26.58■■□□□ 1.85
CTSB-206ENST00000524500 HDGFL2Q7Z4V5 671 aaPredicted RBP26.56■■□□□ 1.84
CTSB-206ENST00000524500 AKAP12Q02952 1782 aa26.56■■□□□ 1.84
CTSB-206ENST00000524500 BRWD3Q6RI45 1802 aa26.55■■□□□ 1.84
CTSB-206ENST00000524500 ZBTB7CA1YPR0 619 aa26.55■■□□□ 1.84
CTSB-206ENST00000524500 SLIT3O75094 1523 aa26.55■■□□□ 1.84
CTSB-206ENST00000524500 PIK3C2AO00443 1686 aa26.54■■□□□ 1.84
CTSB-206ENST00000524500 KCNH5Q8NCM2 988 aa26.54■■□□□ 1.84
CTSB-206ENST00000524500 CAMTA1Q9Y6Y1 1673 aa26.54■■□□□ 1.84
CTSB-206ENST00000524500 SF3B2Q13435 895 aaKnown RBP26.53■■□□□ 1.84
CTSB-206ENST00000524500 TESK2Q96S53 571 aa26.53■■□□□ 1.84
CTSB-206ENST00000524500 SLC12A5Q9H2X9 1139 aa26.53■■□□□ 1.84
CTSB-206ENST00000524500 TERF2IPQ9NYB0 399 aa26.53■■□□□ 1.84
CTSB-206ENST00000524500 USP35Q9P2H5 1018 aa26.53■■□□□ 1.84
CTSB-206ENST00000524500 BLMP54132 1417 aaPredicted RBP26.53■■□□□ 1.84
CTSB-206ENST00000524500 AATKQ6ZMQ8 1374 aa26.51■■□□□ 1.83
CTSB-206ENST00000524500 LARP1Q6PKG0 1096 aaKnown RBP26.51■■□□□ 1.83
CTSB-206ENST00000524500 LMO7Q8WWI1 1683 aa26.5■■□□□ 1.83
CTSB-206ENST00000524500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.5■■□□□ 1.83
CTSB-206ENST00000524500 USP47Q96K76 1375 aa26.49■■□□□ 1.83
CTSB-206ENST00000524500 NINLQ9Y2I6 1382 aa26.48■■□□□ 1.83
CTSB-206ENST00000524500 SOX12O15370 315 aa26.48■■□□□ 1.83
CTSB-206ENST00000524500 BARGINQ6ZT62 677 aa26.48■■□□□ 1.83
CTSB-206ENST00000524500 TCP11L2Q8N4U5 519 aa26.48■■□□□ 1.83
CTSB-206ENST00000524500 CD163L1Q9NR16 1453 aa26.48■■□□□ 1.83
CTSB-206ENST00000524500 THRAP3Q9Y2W1 955 aaKnown RBP26.47■■□□□ 1.83
CTSB-206ENST00000524500 MON2Q7Z3U7 1717 aa26.47■■□□□ 1.83
CTSB-206ENST00000524500 COL5A2P05997 1499 aaPredicted RBP26.47■■□□□ 1.83
CTSB-206ENST00000524500 THSD7AQ9UPZ6 1657 aa26.47■■□□□ 1.83
CTSB-206ENST00000524500 TMF1P82094 1093 aa26.46■■□□□ 1.83
CTSB-206ENST00000524500 ARHGEF25Q86VW2 580 aa26.45■■□□□ 1.82
CTSB-206ENST00000524500 CCER1Q8TC90 406 aaPredicted RBP26.45■■□□□ 1.82
CTSB-206ENST00000524500 EDC4Q6P2E9 1401 aaKnown RBP26.45■■□□□ 1.82
CTSB-206ENST00000524500 A0A1W2PP64 1363 aa26.44■■□□□ 1.82
CTSB-206ENST00000524500 USP31Q70CQ4 1352 aa26.44■■□□□ 1.82
CTSB-206ENST00000524500 CRB1P82279 1406 aa26.43■■□□□ 1.82
CTSB-206ENST00000524500 NME9Q86XW9 330 aa26.43■■□□□ 1.82
CTSB-206ENST00000524500 PDE3BQ13370 1112 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms