RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	C6orf229	H3BNL8	230 aa		10.72	□□□□□ -0.69
PCM1-223	ENST00000524356	KCNH2	Q12809	1159 aa		10.72	□□□□□ -0.69
PCM1-223	ENST00000524356	C6orf118	Q5T5N4	469 aa		10.72	□□□□□ -0.69
PCM1-223	ENST00000524356	ADAMTS8	Q9UP79	889 aa		10.72	□□□□□ -0.69
PCM1-223	ENST00000524356	IRF6	O14896	467 aa		10.71	□□□□□ -0.69
PCM1-223	ENST00000524356	FDX1	P10109	184 aa		10.71	□□□□□ -0.69
PCM1-223	ENST00000524356	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.71	□□□□□ -0.69
PCM1-223	ENST00000524356	GPR161	Q8N6U8	529 aa	Known RBP	10.7	□□□□□ -0.7
PCM1-223	ENST00000524356	ITPKC	Q96DU7	683 aa		10.7	□□□□□ -0.7
PCM1-223	ENST00000524356	RNF225	M0QZC1	329 aa	Predicted RBP	10.69	□□□□□ -0.7
PCM1-223	ENST00000524356	ZIC2	O95409	532 aa	Predicted RBP	10.69	□□□□□ -0.7
PCM1-223	ENST00000524356	NR3C2	P08235	984 aa		10.68	□□□□□ -0.7
PCM1-223	ENST00000524356	NUTM1	Q86Y26	1132 aa		10.68	□□□□□ -0.7
PCM1-223	ENST00000524356	CNTNAP3B	Q96NU0	1288 aa		10.68	□□□□□ -0.7
PCM1-223	ENST00000524356	CNTNAP3	Q9BZ76	1288 aa		10.68	□□□□□ -0.7
PCM1-223	ENST00000524356	CDK15	Q96Q40	435 aa		10.67	□□□□□ -0.7
PCM1-223	ENST00000524356	DNMT3L	Q9UJW3	386 aa		10.67	□□□□□ -0.7
PCM1-223	ENST00000524356	GPCPD1	Q9NPB8	672 aa		10.66	□□□□□ -0.7
PCM1-223	ENST00000524356	FAM174A	Q8TBP5	190 aa		10.65	□□□□□ -0.7
PCM1-223	ENST00000524356	SOS2	Q07890	1332 aa	Predicted RBP	10.64	□□□□□ -0.71
PCM1-223	ENST00000524356	GPAT2	Q6NUI2	795 aa		10.64	□□□□□ -0.71
PCM1-223	ENST00000524356	LINC00528	Q8N1L1	170 aa		10.64	□□□□□ -0.71
PCM1-223	ENST00000524356	BMP2	P12643	396 aa		10.63	□□□□□ -0.71
PCM1-223	ENST00000524356	ZNF385C	Q66K41	422 aa	Predicted RBP	10.63	□□□□□ -0.71
PCM1-223	ENST00000524356	PRR7	Q8TB68	274 aa		10.63	□□□□□ -0.71
PCM1-223	ENST00000524356	FOXJ1	Q92949	421 aa		10.63	□□□□□ -0.71
PCM1-223	ENST00000524356	CLCN1	P35523	988 aa		10.62	□□□□□ -0.71
PCM1-223	ENST00000524356	ARID5B	Q14865	1188 aa		10.62	□□□□□ -0.71
PCM1-223	ENST00000524356	MEIOB	Q8N635	442 aa		10.62	□□□□□ -0.71
PCM1-223	ENST00000524356	CCDC102A	Q96A19	550 aa		10.62	□□□□□ -0.71
PCM1-223	ENST00000524356	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.62	□□□□□ -0.71
PCM1-223	ENST00000524356	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.61	□□□□□ -0.71
PCM1-223	ENST00000524356	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.61	□□□□□ -0.71
PCM1-223	ENST00000524356	NDUFV2	P19404	249 aa		10.6	□□□□□ -0.71
PCM1-223	ENST00000524356	GRM5	P41594	1212 aa		10.6	□□□□□ -0.71
PCM1-223	ENST00000524356	DESI1	Q6ICB0	168 aa		10.6	□□□□□ -0.71
PCM1-223	ENST00000524356	IRS1	P35568	1242 aa		10.59	□□□□□ -0.71
PCM1-223	ENST00000524356	NR5A1	Q13285	461 aa		10.59	□□□□□ -0.71
PCM1-223	ENST00000524356	RNFT1	Q5M7Z0	435 aa		10.59	□□□□□ -0.71
PCM1-223	ENST00000524356	SPIRE2	Q8WWL2	714 aa		10.59	□□□□□ -0.71
PCM1-223	ENST00000524356	UPP2	O95045	317 aa		10.58	□□□□□ -0.72
PCM1-223	ENST00000524356	C4orf48	Q5BLP8	95 aa		10.58	□□□□□ -0.72
PCM1-223	ENST00000524356	XP32	Q5T750	250 aa		10.58	□□□□□ -0.72
PCM1-223	ENST00000524356	SVOP	Q8N4V2	548 aa		10.58	□□□□□ -0.72
PCM1-223	ENST00000524356	WHAMM	Q8TF30	809 aa		10.58	□□□□□ -0.72
PCM1-223	ENST00000524356	MOXD2P	A6NHM9	499 aa		10.57	□□□□□ -0.72
PCM1-223	ENST00000524356	IGHA1	P01876	353 aa		10.57	□□□□□ -0.72
PCM1-223	ENST00000524356	ARHGEF15	O94989	841 aa		10.56	□□□□□ -0.72
PCM1-223	ENST00000524356	CTH	P32929	405 aa		10.56	□□□□□ -0.72
PCM1-223	ENST00000524356	PTS	Q03393	145 aa		10.56	□□□□□ -0.72
PCM1-223	ENST00000524356	MTMR2	Q13614	643 aa		10.56	□□□□□ -0.72
PCM1-223	ENST00000524356	NANOS1	Q8WY41	292 aa	Known RBP	10.55	□□□□□ -0.72
PCM1-223	ENST00000524356	MAP10	Q9P2G4	905 aa		10.54	□□□□□ -0.72
PCM1-223	ENST00000524356	SLURP2	P0DP57	97 aa		10.53	□□□□□ -0.72
PCM1-223	ENST00000524356	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.53	□□□□□ -0.72	1e-10	■□□□□ 9.2
PCM1-223	ENST00000524356	LYPD8	Q6UX82	237 aa		10.53	□□□□□ -0.72
PCM1-223	ENST00000524356	SPDYE5	A6NIY4	337 aa		10.52	□□□□□ -0.73
PCM1-223	ENST00000524356	SPTLC1	O15269	473 aa		10.52	□□□□□ -0.73
PCM1-223	ENST00000524356	F12	P00748	615 aa	Predicted RBP	10.51	□□□□□ -0.73
PCM1-223	ENST00000524356	TTLL8	A6PVC2	850 aa		10.5	□□□□□ -0.73
PCM1-223	ENST00000524356	FOXK2	Q01167	660 aa		10.5	□□□□□ -0.73
PCM1-223	ENST00000524356	KANK3	Q6NY19	840 aa		10.5	□□□□□ -0.73
PCM1-223	ENST00000524356	CCDC155	Q8N6L0	562 aa		10.5	□□□□□ -0.73
PCM1-223	ENST00000524356	TSEN34	Q9BSV6	310 aa	Known RBP	10.5	□□□□□ -0.73
PCM1-223	ENST00000524356	SSTR3	P32745	418 aa	Predicted RBP	10.49	□□□□□ -0.73
PCM1-223	ENST00000524356	CFAP99	D6REC4	459 aa		10.48	□□□□□ -0.73
PCM1-223	ENST00000524356	FSHR	P23945	695 aa		10.48	□□□□□ -0.73
PCM1-223	ENST00000524356	AGER	Q15109	404 aa		10.48	□□□□□ -0.73
PCM1-223	ENST00000524356	KRI1	Q8N9T8	703 aa	Known RBP	10.48	□□□□□ -0.73
PCM1-223	ENST00000524356	FIGNL2	A6NMB9	653 aa		10.47	□□□□□ -0.73
PCM1-223	ENST00000524356	BPHL	Q86WA6	291 aa	Predicted RBP	10.46	□□□□□ -0.73
PCM1-223	ENST00000524356	C1QTNF2	Q9BXJ5	285 aa		10.46	□□□□□ -0.73
PCM1-223	ENST00000524356	MARS	P56192	900 aa	Known RBP	10.45	□□□□□ -0.74
PCM1-223	ENST00000524356	SLC35F4	A4IF30	521 aa		10.44	□□□□□ -0.74
PCM1-223	ENST00000524356	VWA5B2	Q8N398	1253 aa		10.44	□□□□□ -0.74
PCM1-223	ENST00000524356	ITGA6	P23229	1130 aa		10.43	□□□□□ -0.74
PCM1-223	ENST00000524356	SCARF2	Q96GP6	870 aa	Predicted RBP	10.43	□□□□□ -0.74
PCM1-223	ENST00000524356	MAP4K5	Q9Y4K4	846 aa		10.43	□□□□□ -0.74
PCM1-223	ENST00000524356	ADAM23	O75077	832 aa		10.42	□□□□□ -0.74
PCM1-223	ENST00000524356	SH3RF1	Q7Z6J0	888 aa		10.42	□□□□□ -0.74
PCM1-223	ENST00000524356	PCDHB15	Q9Y5E8	787 aa		10.42	□□□□□ -0.74
PCM1-223	ENST00000524356	EMILIN1	Q9Y6C2	1016 aa		10.42	□□□□□ -0.74
PCM1-223	ENST00000524356	CDC14C	A4D256	554 aa		10.4	□□□□□ -0.74
PCM1-223	ENST00000524356	PER1	O15534	1290 aa	Predicted RBP	10.4	□□□□□ -0.74
PCM1-223	ENST00000524356	SPINT1	O43278	529 aa		10.4	□□□□□ -0.74
PCM1-223	ENST00000524356	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.4	□□□□□ -0.74
PCM1-223	ENST00000524356	LYPD4	Q6UWN0	246 aa		10.4	□□□□□ -0.74
PCM1-223	ENST00000524356	CCDC116	Q8IYX3	515 aa		10.4	□□□□□ -0.74
PCM1-223	ENST00000524356	KRTAP4-8	Q9BYQ9	185 aa		10.4	□□□□□ -0.74
PCM1-223	ENST00000524356	ADAMTS2	O95450	1211 aa		10.39	□□□□□ -0.75
PCM1-223	ENST00000524356	ITGB2	P05107	769 aa		10.39	□□□□□ -0.75
PCM1-223	ENST00000524356	GJA5	P36382	358 aa		10.39	□□□□□ -0.75
PCM1-223	ENST00000524356	CBLB	Q13191	982 aa		10.39	□□□□□ -0.75
PCM1-223	ENST00000524356	SV2A	Q7L0J3	742 aa		10.39	□□□□□ -0.75
PCM1-223	ENST00000524356	VASH1	Q7L8A9	365 aa	Predicted RBP	10.39	□□□□□ -0.75
PCM1-223	ENST00000524356	TRMT44	Q8IYL2	757 aa	Known RBP	10.39	□□□□□ -0.75
PCM1-223	ENST00000524356	PLA2G4E	Q3MJ16	856 aa		10.38	□□□□□ -0.75
PCM1-223	ENST00000524356		Q6ZVU0	165 aa		10.38	□□□□□ -0.75
PCM1-223	ENST00000524356	HRC	P23327	699 aa		10.37	□□□□□ -0.75
PCM1-223	ENST00000524356	SPOCK3	Q9BQ16	436 aa		10.37	□□□□□ -0.75

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