RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 DIAPH1O60610 1272 aaKnown RBP13.13□□□□□ -0.31
VPS13B-212ENST00000524330 ADGRL3Q9HAR2 1447 aa13.13□□□□□ -0.31
VPS13B-212ENST00000524330 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
VPS13B-212ENST00000524330 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
VPS13B-212ENST00000524330 NKTRP30414 1462 aaKnown RBP13.12□□□□□ -0.31
VPS13B-212ENST00000524330 U2AF1L5P0DN76 240 aaPredicted RBP13.12□□□□□ -0.31
VPS13B-212ENST00000524330 U2AF1Q01081 240 aaKnown RBP eCLIP13.12□□□□□ -0.31
VPS13B-212ENST00000524330 SALL2Q9Y467 1007 aaPredicted RBP13.12□□□□□ -0.31
VPS13B-212ENST00000524330 FMN2Q9NZ56 1722 aa13.12□□□□□ -0.31
VPS13B-212ENST00000524330 USP6P35125 1406 aa13.12□□□□□ -0.31
VPS13B-212ENST00000524330 MAPK8IP3Q9UPT6 1336 aa13.12□□□□□ -0.31
VPS13B-212ENST00000524330 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
VPS13B-212ENST00000524330 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
VPS13B-212ENST00000524330 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
VPS13B-212ENST00000524330 NUTM2FA1L443 756 aa13.1□□□□□ -0.31
VPS13B-212ENST00000524330 NME9Q86XW9 330 aa13.1□□□□□ -0.31
VPS13B-212ENST00000524330 APAF1O14727 1248 aa13.09□□□□□ -0.31
VPS13B-212ENST00000524330 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
VPS13B-212ENST00000524330 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
VPS13B-212ENST00000524330 PHF8Q9UPP1 1060 aa13.09□□□□□ -0.31
VPS13B-212ENST00000524330 NCOA3Q9Y6Q9 1424 aa13.09□□□□□ -0.31
VPS13B-212ENST00000524330 SHPRHQ149N8 1683 aa13.08□□□□□ -0.31
VPS13B-212ENST00000524330 PNPLA6Q8IY17 1366 aa13.08□□□□□ -0.31
VPS13B-212ENST00000524330 E9PSI1 815 aa13.08□□□□□ -0.32
VPS13B-212ENST00000524330 CDK12Q9NYV4 1490 aaPredicted RBP13.08□□□□□ -0.32
VPS13B-212ENST00000524330 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
VPS13B-212ENST00000524330 PMFBP1Q8TBY8 1022 aa13.07□□□□□ -0.32
VPS13B-212ENST00000524330 POLKQ9UBT6 870 aa13.07□□□□□ -0.32
VPS13B-212ENST00000524330 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
VPS13B-212ENST00000524330 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
VPS13B-212ENST00000524330 FCHSD2O94868 740 aa13.06□□□□□ -0.32
VPS13B-212ENST00000524330 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
VPS13B-212ENST00000524330 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
VPS13B-212ENST00000524330 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.06□□□□□ -0.32
VPS13B-212ENST00000524330 RCAN3Q9UKA8 241 aa13.06□□□□□ -0.32
VPS13B-212ENST00000524330 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
VPS13B-212ENST00000524330 ATF3P18847 181 aa13.05□□□□□ -0.32
VPS13B-212ENST00000524330 C19orf44Q9H6X5 657 aa13.05□□□□□ -0.32
VPS13B-212ENST00000524330 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
VPS13B-212ENST00000524330 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
VPS13B-212ENST00000524330 CALD1Q05682 793 aaKnown RBP13.04□□□□□ -0.32
VPS13B-212ENST00000524330 PSME1Q06323 249 aa13.04□□□□□ -0.32
VPS13B-212ENST00000524330 TCP11L2Q8N4U5 519 aa13.04□□□□□ -0.32
VPS13B-212ENST00000524330 OVOS2A0A0J9YW53 1432 aa13.04□□□□□ -0.32
VPS13B-212ENST00000524330 OVOS2Q6IE36 1432 aa13.04□□□□□ -0.32
VPS13B-212ENST00000524330 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
VPS13B-212ENST00000524330 LRRC7Q96NW7 1537 aa13.03□□□□□ -0.32
VPS13B-212ENST00000524330 ESCO1Q5FWF5 840 aa13.03□□□□□ -0.32
VPS13B-212ENST00000524330 MYH16Q9H6N6 1097 aa13.03□□□□□ -0.32
VPS13B-212ENST00000524330 ZNF521Q96K83 1311 aa13.03□□□□□ -0.32
VPS13B-212ENST00000524330 KIF24Q5T7B8 1368 aa13.03□□□□□ -0.32
VPS13B-212ENST00000524330 DCCP43146 1447 aa13.03□□□□□ -0.32
VPS13B-212ENST00000524330 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.32
VPS13B-212ENST00000524330 SLFN5Q08AF3 891 aa13.02□□□□□ -0.33
VPS13B-212ENST00000524330 LMOD3Q0VAK6 560 aa13.02□□□□□ -0.33
VPS13B-212ENST00000524330 PPP4R2Q9NY27 417 aa13.02□□□□□ -0.33
VPS13B-212ENST00000524330 DMRT2Q9Y5R5 561 aa13.02□□□□□ -0.33
VPS13B-212ENST00000524330 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
VPS13B-212ENST00000524330 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
VPS13B-212ENST00000524330 NLRP6P59044 892 aa13.01□□□□□ -0.33
VPS13B-212ENST00000524330 WWC1Q8IX03 1113 aa13.01□□□□□ -0.33
VPS13B-212ENST00000524330 ABTB2Q8N961 1025 aa13.01□□□□□ -0.33
VPS13B-212ENST00000524330 KIF1AQ12756 1690 aa13.01□□□□□ -0.33
VPS13B-212ENST00000524330 IQSEC2Q5JU85 1478 aa13□□□□□ -0.33
VPS13B-212ENST00000524330 SENP3-EIF4A1A0A087X0R7 540 aa13□□□□□ -0.33
VPS13B-212ENST00000524330 KDM4FA0A1W2PPD8 638 aa13□□□□□ -0.33
VPS13B-212ENST00000524330 AMPHP49418 695 aa13□□□□□ -0.33
VPS13B-212ENST00000524330 CADPS2Q86UW7 1296 aa13□□□□□ -0.33
VPS13B-212ENST00000524330 KCNH5Q8NCM2 988 aa13□□□□□ -0.33
VPS13B-212ENST00000524330 CDCA7LQ96GN5 454 aa13□□□□□ -0.33
VPS13B-212ENST00000524330 EMILIN1Q9Y6C2 1016 aa13□□□□□ -0.33
VPS13B-212ENST00000524330 SBNO1A3KN83 1393 aa12.99□□□□□ -0.33
VPS13B-212ENST00000524330 MSH6P52701 1360 aa12.99□□□□□ -0.33
VPS13B-212ENST00000524330 IL13P35225 146 aa12.99□□□□□ -0.33
VPS13B-212ENST00000524330 RRP1P56182 461 aaKnown RBP12.99□□□□□ -0.33
VPS13B-212ENST00000524330 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
VPS13B-212ENST00000524330 DUSP27Q5VZP5 1158 aa12.99□□□□□ -0.33
VPS13B-212ENST00000524330 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
VPS13B-212ENST00000524330 FLT4P35916 1363 aa12.98□□□□□ -0.33
VPS13B-212ENST00000524330 IL16Q14005 1332 aa12.98□□□□□ -0.33
VPS13B-212ENST00000524330 CT47B1P0C2W7 299 aaPredicted RBP12.98□□□□□ -0.33
VPS13B-212ENST00000524330 TMPOP42166 694 aaKnown RBP12.98□□□□□ -0.33
VPS13B-212ENST00000524330 RRS1Q15050 365 aaKnown RBP12.98□□□□□ -0.33
VPS13B-212ENST00000524330 USP54Q70EL1 1684 aa12.98□□□□□ -0.33
VPS13B-212ENST00000524330 TMEM94Q12767 1356 aa12.97□□□□□ -0.33
VPS13B-212ENST00000524330 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
VPS13B-212ENST00000524330 HSPA2P54652 639 aa12.97□□□□□ -0.33
VPS13B-212ENST00000524330 TRMT2AQ8IZ69 625 aaKnown RBP12.97□□□□□ -0.33
VPS13B-212ENST00000524330 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
VPS13B-212ENST00000524330 PHF23Q9BUL5 403 aaPredicted RBP12.97□□□□□ -0.33
VPS13B-212ENST00000524330 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
VPS13B-212ENST00000524330 RTL1A6NKG5 1358 aa12.96□□□□□ -0.33
VPS13B-212ENST00000524330 RIPK4P57078 832 aa12.96□□□□□ -0.33
VPS13B-212ENST00000524330 RSPH6AQ9H0K4 717 aa12.96□□□□□ -0.33
VPS13B-212ENST00000524330 NFE2L2Q16236 605 aa12.95□□□□□ -0.34
VPS13B-212ENST00000524330 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
VPS13B-212ENST00000524330 C1orf167Q5SNV9 1468 aa12.95□□□□□ -0.34
VPS13B-212ENST00000524330 PIK3C2AO00443 1686 aa12.95□□□□□ -0.34
VPS13B-212ENST00000524330 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
VPS13B-212ENST00000524330 IRX6P78412 446 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms