RNA–Protein interactions for RNA: ENST00000524089.1

CDH15-203, Transcript of cadherin 15, humanhuman

TSL 2

Gene CDH15, Length 1,587 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15-203ENST00000524089 USP6P35125 1406 aa22.27■■□□□ 1.15
CDH15-203ENST00000524089 ZNF692Q9BU19 519 aaPredicted RBP22.26■■□□□ 1.15
CDH15-203ENST00000524089 RALBP1Q15311 655 aa22.25■■□□□ 1.15
CDH15-203ENST00000524089 AMER1Q5JTC6 1135 aaPredicted RBP22.25■■□□□ 1.15
CDH15-203ENST00000524089 FAM9BQ8IZU0 186 aa22.25■■□□□ 1.15
CDH15-203ENST00000524089 NGDNQ8NEJ9 315 aaKnown RBP22.25■■□□□ 1.15
CDH15-203ENST00000524089 NPC1L1Q9UHC9 1359 aa22.25■■□□□ 1.15
CDH15-203ENST00000524089 ORAI2Q96SN7 254 aa22.25■■□□□ 1.15
CDH15-203ENST00000524089 BRD4O60885 1362 aaPredicted RBP22.24■■□□□ 1.15
CDH15-203ENST00000524089 CGNL1Q0VF96 1302 aa22.23■■□□□ 1.15
CDH15-203ENST00000524089 PPP4R2Q9NY27 417 aa22.23■■□□□ 1.15
CDH15-203ENST00000524089 TRPM3Q9HCF6 1732 aaPredicted RBP22.22■■□□□ 1.15
CDH15-203ENST00000524089 CNGB1Q14028 1251 aaPredicted RBP22.22■■□□□ 1.15
CDH15-203ENST00000524089 CC2D1BQ5T0F9 858 aaKnown RBP22.21■■□□□ 1.15
CDH15-203ENST00000524089 NSD2O96028 1365 aa22.21■■□□□ 1.15
CDH15-203ENST00000524089 SSH2Q76I76 1423 aa22.21■■□□□ 1.15
CDH15-203ENST00000524089 SLAIN2Q9P270 581 aa22.21■■□□□ 1.15
CDH15-203ENST00000524089 IQSEC2Q5JU85 1478 aa22.2■■□□□ 1.14
CDH15-203ENST00000524089 PIK3C2AO00443 1686 aa22.2■■□□□ 1.14
CDH15-203ENST00000524089 NHSL1Q5SYE7 1610 aa22.2■■□□□ 1.14
CDH15-203ENST00000524089 INSRP06213 1382 aa22.2■■□□□ 1.14
CDH15-203ENST00000524089 PARD3Q8TEW0 1356 aa22.2■■□□□ 1.14
CDH15-203ENST00000524089 ROBO1Q9Y6N7 1651 aa22.19■■□□□ 1.14
CDH15-203ENST00000524089 USP54Q70EL1 1684 aa22.18■■□□□ 1.14
CDH15-203ENST00000524089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.18■■□□□ 1.14
CDH15-203ENST00000524089 MYBBP1AQ9BQG0 1328 aaKnown RBP22.18■■□□□ 1.14
CDH15-203ENST00000524089 MARF1Q9Y4F3 1742 aaKnown RBP22.17■■□□□ 1.14
CDH15-203ENST00000524089 TTC21BQ7Z4L5 1316 aa22.16■■□□□ 1.14
CDH15-203ENST00000524089 FOXO3O43524 673 aa22.16■■□□□ 1.14
CDH15-203ENST00000524089 BRINP3Q76B58 766 aa22.16■■□□□ 1.14
CDH15-203ENST00000524089 PNISRQ8TF01 805 aaKnown RBP22.16■■□□□ 1.14
CDH15-203ENST00000524089 RNF123Q5XPI4 1314 aa22.15■■□□□ 1.14
CDH15-203ENST00000524089 FYB1O15117 783 aa22.15■■□□□ 1.14
CDH15-203ENST00000524089 PSME1Q06323 249 aa22.15■■□□□ 1.14
CDH15-203ENST00000524089 ALS2Q96Q42 1657 aa22.15■■□□□ 1.14
CDH15-203ENST00000524089 TTC21AQ8NDW8 1320 aa22.15■■□□□ 1.14
CDH15-203ENST00000524089 MAP2P11137 1827 aaKnown RBP22.14■■□□□ 1.14
CDH15-203ENST00000524089 NUDCQ9Y266 331 aa22.14■■□□□ 1.13
CDH15-203ENST00000524089 GGNBP2Q9H3C7 697 aa22.13■■□□□ 1.13
CDH15-203ENST00000524089 NME9Q86XW9 330 aa22.12■■□□□ 1.13
CDH15-203ENST00000524089 RBM19Q9Y4C8 960 aaKnown RBP22.12■■□□□ 1.13
CDH15-203ENST00000524089 NPHP3Q7Z494 1330 aa22.12■■□□□ 1.13
CDH15-203ENST00000524089 PXDNQ92626 1479 aa22.12■■□□□ 1.13
CDH15-203ENST00000524089 XPCQ01831 940 aaPredicted RBP22.1■■□□□ 1.13
CDH15-203ENST00000524089 ILDR1Q86SU0 546 aaPredicted RBP22.1■■□□□ 1.13
CDH15-203ENST00000524089 MORC1Q86VD1 984 aa22.1■■□□□ 1.13
CDH15-203ENST00000524089 OVOS2A0A0J9YW53 1432 aa22.1■■□□□ 1.13
CDH15-203ENST00000524089 OVOS2Q6IE36 1432 aa22.1■■□□□ 1.13
CDH15-203ENST00000524089 KRT28Q7Z3Y7 464 aa22.09■■□□□ 1.13
CDH15-203ENST00000524089 CERKQ8TCT0 537 aa22.09■■□□□ 1.13
CDH15-203ENST00000524089 PAK3O75914 559 aaPredicted RBP22.08■■□□□ 1.13
CDH15-203ENST00000524089 DDX17Q92841 729 aaKnown RBP22.08■■□□□ 1.13
CDH15-203ENST00000524089 AHDC1Q5TGY3 1603 aaPredicted RBP22.08■■□□□ 1.12
CDH15-203ENST00000524089 TOM1O60784 492 aa22.08■■□□□ 1.12
CDH15-203ENST00000524089 USP31Q70CQ4 1352 aa22.07■■□□□ 1.12
CDH15-203ENST00000524089 NLRP13Q86W25 1043 aa22.07■■□□□ 1.12
CDH15-203ENST00000524089 ZRANB1Q9UGI0 708 aa22.07■■□□□ 1.12
CDH15-203ENST00000524089 COG3Q96JB2 828 aa22.06■■□□□ 1.12
CDH15-203ENST00000524089 PHLPP1O60346 1717 aa22.05■■□□□ 1.12
CDH15-203ENST00000524089 SBNO1A3KN83 1393 aa22.05■■□□□ 1.12
CDH15-203ENST00000524089 ABTB2Q8N961 1025 aa22.04■■□□□ 1.12
CDH15-203ENST00000524089 TNS3Q68CZ2 1445 aa22.04■■□□□ 1.12
CDH15-203ENST00000524089 CRYBG1Q9Y4K1 1723 aa22.04■■□□□ 1.12
CDH15-203ENST00000524089 PPP2R1AP30153 589 aa22.04■■□□□ 1.12
CDH15-203ENST00000524089 LTN1O94822 1766 aa22.03■■□□□ 1.12
CDH15-203ENST00000524089 SOS2Q07890 1332 aaPredicted RBP22.03■■□□□ 1.12
CDH15-203ENST00000524089 FANCIQ9NVI1 1328 aa22.03■■□□□ 1.12
CDH15-203ENST00000524089 UBAP1LF5GYI3 381 aa22.03■■□□□ 1.12
CDH15-203ENST00000524089 TNNT2P45379 298 aaPredicted RBP22.03■■□□□ 1.12
CDH15-203ENST00000524089 ANP32EQ9BTT0 268 aa22.03■■□□□ 1.12
CDH15-203ENST00000524089 PHRF1Q9P1Y6 1649 aaKnown RBP22.02■■□□□ 1.12
CDH15-203ENST00000524089 NLRP6P59044 892 aa22.01■■□□□ 1.11
CDH15-203ENST00000524089 PDE3BQ13370 1112 aa22.01■■□□□ 1.11
CDH15-203ENST00000524089 ABCA3Q99758 1704 aa22■■□□□ 1.11
CDH15-203ENST00000524089 NUTM2GQ5VZR2 741 aa21.99■■□□□ 1.11
CDH15-203ENST00000524089 MED1Q15648 1581 aaPredicted RBP21.99■■□□□ 1.11
CDH15-203ENST00000524089 SPATA31A3Q5VYP0 1347 aa21.99■■□□□ 1.11
CDH15-203ENST00000524089 SLIT3O75094 1523 aa21.99■■□□□ 1.11
CDH15-203ENST00000524089 COL16A1Q07092 1604 aaPredicted RBP21.99■■□□□ 1.11
CDH15-203ENST00000524089 AATKQ6ZMQ8 1374 aa21.98■■□□□ 1.11
CDH15-203ENST00000524089 PIP4K2BP78356 416 aa21.98■■□□□ 1.11
CDH15-203ENST00000524089 IRX6P78412 446 aaPredicted RBP21.98■■□□□ 1.11
CDH15-203ENST00000524089 LMOD2Q6P5Q4 547 aa21.98■■□□□ 1.11
CDH15-203ENST00000524089 FBXO41Q8TF61 875 aa21.98■■□□□ 1.11
CDH15-203ENST00000524089 ARHGEF10O15013 1369 aa21.97■■□□□ 1.11
CDH15-203ENST00000524089 NFAT5O94916 1531 aa21.96■■□□□ 1.11
CDH15-203ENST00000524089 PEAK1Q9H792 1746 aa21.95■■□□□ 1.1
CDH15-203ENST00000524089 SHPRHQ149N8 1683 aa21.94■■□□□ 1.1
CDH15-203ENST00000524089 USP19O94966 1318 aa21.94■■□□□ 1.1
CDH15-203ENST00000524089 COL22A1Q8NFW1 1626 aaPredicted RBP21.93■■□□□ 1.1
CDH15-203ENST00000524089 BLMP54132 1417 aaPredicted RBP21.92■■□□□ 1.1
CDH15-203ENST00000524089 SOX12O15370 315 aa21.92■■□□□ 1.1
CDH15-203ENST00000524089 FBLN1P23142 703 aa21.92■■□□□ 1.1
CDH15-203ENST00000524089 MTHFSP49914 203 aa21.92■■□□□ 1.1
CDH15-203ENST00000524089 CDK12Q9NYV4 1490 aaPredicted RBP21.92■■□□□ 1.1
CDH15-203ENST00000524089 POLKQ9UBT6 870 aa21.91■■□□□ 1.1
CDH15-203ENST00000524089 KCNH5Q8NCM2 988 aa21.9■■□□□ 1.1
CDH15-203ENST00000524089 RRS1Q15050 365 aaKnown RBP21.89■■□□□ 1.09
CDH15-203ENST00000524089 COL3A1P02461 1466 aaPredicted RBP21.89■■□□□ 1.09
CDH15-203ENST00000524089 RGPD5Q99666 1765 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms