RNA–Protein interactions for RNA: ENST00000523960.1

STK3-217, Transcript of serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene STK3, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK3-217ENST00000523960 NPC1L1Q9UHC9 1359 aa14.41□□□□□ -0.1
STK3-217ENST00000523960 DNTTIP2Q5QJE6 756 aaKnown RBP14.41□□□□□ -0.1
STK3-217ENST00000523960 COL17A1Q9UMD9 1497 aaPredicted RBP14.41□□□□□ -0.1
STK3-217ENST00000523960 PIK3C2GO75747 1445 aa14.41□□□□□ -0.1
STK3-217ENST00000523960 SPRYD3Q8NCJ5 442 aa14.41□□□□□ -0.1
STK3-217ENST00000523960 KCNH5Q8NCM2 988 aa14.41□□□□□ -0.1
STK3-217ENST00000523960 TPM4P67936 248 aa14.4□□□□□ -0.1
STK3-217ENST00000523960 TMX4Q9H1E5 349 aaPredicted RBP14.4□□□□□ -0.1
STK3-217ENST00000523960 ERC1Q8IUD2 1116 aa14.4□□□□□ -0.1
STK3-217ENST00000523960 IFT57Q9NWB7 429 aa14.4□□□□□ -0.1
STK3-217ENST00000523960 RNF20Q5VTR2 975 aa14.4□□□□□ -0.1
STK3-217ENST00000523960 IFIT2P09913 472 aaKnown RBP14.4□□□□□ -0.1
STK3-217ENST00000523960 ATF7IPQ6VMQ6 1270 aa14.4□□□□□ -0.1
STK3-217ENST00000523960 G3BP1Q13283 466 aaKnown RBP eCLIP14.39□□□□□ -0.11
STK3-217ENST00000523960 TNRQ92752 1358 aa14.39□□□□□ -0.11
STK3-217ENST00000523960 PREX2Q70Z35 1606 aa14.39□□□□□ -0.11
STK3-217ENST00000523960 TTC21BQ7Z4L5 1316 aa14.39□□□□□ -0.11
STK3-217ENST00000523960 ZKSCAN1P17029 563 aaPredicted RBP14.39□□□□□ -0.11
STK3-217ENST00000523960 IDI1Q13907 227 aa14.39□□□□□ -0.11
STK3-217ENST00000523960 WASLO00401 505 aaPredicted RBP14.39□□□□□ -0.11
STK3-217ENST00000523960 UBTFL1P0CB47 393 aaPredicted RBP14.39□□□□□ -0.11
STK3-217ENST00000523960 NUCB2P80303 420 aa14.39□□□□□ -0.11
STK3-217ENST00000523960 HIP1O00291 1037 aa14.38□□□□□ -0.11
STK3-217ENST00000523960 TMPOP42166 694 aaKnown RBP14.38□□□□□ -0.11
STK3-217ENST00000523960 KDM5DQ9BY66 1539 aa14.38□□□□□ -0.11
STK3-217ENST00000523960 HSP90B1P14625 803 aaKnown RBP14.38□□□□□ -0.11
STK3-217ENST00000523960 CCDC184Q52MB2 194 aa14.38□□□□□ -0.11
STK3-217ENST00000523960 RILPL2Q969X0 211 aa14.38□□□□□ -0.11
STK3-217ENST00000523960 C22orf23Q9BZE7 217 aa14.38□□□□□ -0.11
STK3-217ENST00000523960 MCM2P49736 904 aa14.37□□□□□ -0.11
STK3-217ENST00000523960 POLR3AO14802 1390 aaPredicted RBP14.37□□□□□ -0.11
STK3-217ENST00000523960 NOB1Q9ULX3 412 aaKnown RBP14.37□□□□□ -0.11
STK3-217ENST00000523960 EIF2S2P20042 333 aaKnown RBP14.36□□□□□ -0.11
STK3-217ENST00000523960 PROSER2Q86WR7 435 aaPredicted RBP14.36□□□□□ -0.11
STK3-217ENST00000523960 ZFYVE9O95405 1425 aa14.36□□□□□ -0.11
STK3-217ENST00000523960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.36□□□□□ -0.11
STK3-217ENST00000523960 GNAI2P04899 355 aa14.35□□□□□ -0.11
STK3-217ENST00000523960 ESCO1Q5FWF5 840 aa14.35□□□□□ -0.11
STK3-217ENST00000523960 SRCIN1Q9C0H9 1055 aa14.35□□□□□ -0.11
STK3-217ENST00000523960 LRPPRCP42704 1394 aaKnown RBP14.35□□□□□ -0.11
STK3-217ENST00000523960 KIAA2012Q0VF49 1180 aa14.35□□□□□ -0.11
STK3-217ENST00000523960 SPG7Q9UQ90 795 aa14.35□□□□□ -0.11
STK3-217ENST00000523960 ZNF330Q9Y3S2 320 aaPredicted RBP14.35□□□□□ -0.11
STK3-217ENST00000523960 TATP17735 454 aaPredicted RBP14.34□□□□□ -0.11
STK3-217ENST00000523960 CCDC27Q2M243 656 aa14.34□□□□□ -0.11
STK3-217ENST00000523960 SULT6B1Q6IMI4 303 aa14.34□□□□□ -0.11
STK3-217ENST00000523960 PDZRN3Q9UPQ7 1066 aa14.34□□□□□ -0.11
STK3-217ENST00000523960 ARAP3Q8WWN8 1544 aa14.34□□□□□ -0.11
STK3-217ENST00000523960 IL27Q8NEV9 243 aa14.34□□□□□ -0.11
STK3-217ENST00000523960 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
STK3-217ENST00000523960 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.11
STK3-217ENST00000523960 BACH2Q9BYV9 841 aa14.33□□□□□ -0.12
STK3-217ENST00000523960 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
STK3-217ENST00000523960 CNTROBQ8N137 903 aa14.33□□□□□ -0.12
STK3-217ENST00000523960 PLXNC1O60486 1568 aa14.33□□□□□ -0.12
STK3-217ENST00000523960 RIMS2Q9UQ26 1411 aa14.33□□□□□ -0.12
STK3-217ENST00000523960 CCDC9Q9Y3X0 531 aaKnown RBP14.33□□□□□ -0.12
STK3-217ENST00000523960 GSE1Q14687 1217 aa14.33□□□□□ -0.12
STK3-217ENST00000523960 PLCB2Q00722 1185 aa14.32□□□□□ -0.12
STK3-217ENST00000523960 RIC3Q7Z5B4 369 aa14.32□□□□□ -0.12
STK3-217ENST00000523960 ATP10AO60312 1499 aa14.32□□□□□ -0.12
STK3-217ENST00000523960 NAP1L5Q96NT1 182 aaPredicted RBP14.32□□□□□ -0.12
STK3-217ENST00000523960 BCAR3O75815 825 aa14.31□□□□□ -0.12
STK3-217ENST00000523960 RABEP1Q15276 862 aa14.31□□□□□ -0.12
STK3-217ENST00000523960 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
STK3-217ENST00000523960 SAMD9LQ8IVG5 1584 aa14.31□□□□□ -0.12
STK3-217ENST00000523960 LNPKQ9C0E8 428 aa14.31□□□□□ -0.12
STK3-217ENST00000523960 NLRP2Q9NX02 1062 aa14.31□□□□□ -0.12
STK3-217ENST00000523960 MBD5Q9P267 1494 aa14.31□□□□□ -0.12
STK3-217ENST00000523960 DRC7Q8IY82 874 aa14.3□□□□□ -0.12
STK3-217ENST00000523960 PSMA5P28066 241 aa14.3□□□□□ -0.12
STK3-217ENST00000523960 CPLX2Q6PUV4 134 aaKnown RBP14.3□□□□□ -0.12
STK3-217ENST00000523960 AMOTQ4VCS5 1084 aa14.3□□□□□ -0.12
STK3-217ENST00000523960 GNAT3A8MTJ3 354 aa14.29□□□□□ -0.12
STK3-217ENST00000523960 ABCC1P33527 1531 aa14.29□□□□□ -0.12
STK3-217ENST00000523960 HMGB2P26583 209 aaKnown RBP14.29□□□□□ -0.12
STK3-217ENST00000523960 RARSP54136 660 aaKnown RBP14.29□□□□□ -0.12
STK3-217ENST00000523960 AMER1Q5JTC6 1135 aaPredicted RBP14.29□□□□□ -0.12
STK3-217ENST00000523960 TSR2Q969E8 191 aaKnown RBP14.28□□□□□ -0.12
STK3-217ENST00000523960 CLASRPQ8N2M8 674 aaKnown RBP14.28□□□□□ -0.12
STK3-217ENST00000523960 TESK2Q96S53 571 aa14.28□□□□□ -0.12
STK3-217ENST00000523960 PTPRCP08575 1304 aa14.28□□□□□ -0.12
STK3-217ENST00000523960 PDIA4P13667 645 aaKnown RBP14.28□□□□□ -0.12
STK3-217ENST00000523960 DUSP27Q5VZP5 1158 aa14.28□□□□□ -0.12
STK3-217ENST00000523960 FAM184AQ8NB25 1140 aa14.28□□□□□ -0.12
STK3-217ENST00000523960 TRPM2O94759 1503 aa14.28□□□□□ -0.12
STK3-217ENST00000523960 CHD1O14646 1710 aa14.27□□□□□ -0.12
STK3-217ENST00000523960 H3BQV1 296 aa14.27□□□□□ -0.12
STK3-217ENST00000523960 IFFO2Q5TF58 517 aa14.27□□□□□ -0.12
STK3-217ENST00000523960 SLC4A2P04920 1241 aa14.27□□□□□ -0.12
STK3-217ENST00000523960 SYNE3Q6ZMZ3 975 aa14.27□□□□□ -0.13
STK3-217ENST00000523960 ANO2Q9NQ90 1003 aa14.27□□□□□ -0.13
STK3-217ENST00000523960 HDGFL1Q5TGJ6 251 aa14.27□□□□□ -0.13
STK3-217ENST00000523960 CHD1LQ86WJ1 897 aa14.27□□□□□ -0.13
STK3-217ENST00000523960 CWC22Q9HCG8 908 aaKnown RBP14.26□□□□□ -0.13
STK3-217ENST00000523960 ZCCHC11Q5TAX3 1644 aaKnown RBP14.26□□□□□ -0.13
STK3-217ENST00000523960 GTF2E1P29083 439 aaPredicted RBP14.26□□□□□ -0.13
STK3-217ENST00000523960 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.26□□□□□ -0.13
STK3-217ENST00000523960 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
STK3-217ENST00000523960 KDM5AP29375 1690 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms