RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 ANKRD26Q9UPS8 1709 aa20.34■□□□□ 0.85
HMBOX1-210ENST00000523613 NRKQ7Z2Y5 1582 aa20.33■□□□□ 0.85
HMBOX1-210ENST00000523613 C1orf167Q5SNV9 1468 aa20.33■□□□□ 0.85
HMBOX1-210ENST00000523613 TTC21BQ7Z4L5 1316 aa20.32■□□□□ 0.84
HMBOX1-210ENST00000523613 MST1RQ04912 1400 aa20.32■□□□□ 0.84
HMBOX1-210ENST00000523613 TNNT2P45379 298 aaPredicted RBP20.31■□□□□ 0.84
HMBOX1-210ENST00000523613 TTC21AQ8NDW8 1320 aa20.31■□□□□ 0.84
HMBOX1-210ENST00000523613 NME9Q86XW9 330 aa20.3■□□□□ 0.84
HMBOX1-210ENST00000523613 ORAI2Q96SN7 254 aa20.3■□□□□ 0.84
HMBOX1-210ENST00000523613 SSH2Q76I76 1423 aa20.3■□□□□ 0.84
HMBOX1-210ENST00000523613 KIF1AQ12756 1690 aa20.29■□□□□ 0.84
HMBOX1-210ENST00000523613 FAM9BQ8IZU0 186 aa20.27■□□□□ 0.84
HMBOX1-210ENST00000523613 COG3Q96JB2 828 aa20.27■□□□□ 0.84
HMBOX1-210ENST00000523613 PSME1Q06323 249 aa20.27■□□□□ 0.83
HMBOX1-210ENST00000523613 PNISRQ8TF01 805 aaKnown RBP20.24■□□□□ 0.83
HMBOX1-210ENST00000523613 ZRANB1Q9UGI0 708 aa20.24■□□□□ 0.83
HMBOX1-210ENST00000523613 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
HMBOX1-210ENST00000523613 FOXO3O43524 673 aa20.23■□□□□ 0.83
HMBOX1-210ENST00000523613 PAK3O75914 559 aaPredicted RBP20.23■□□□□ 0.83
HMBOX1-210ENST00000523613 LTBP4Q8N2S1 1624 aa20.23■□□□□ 0.83
HMBOX1-210ENST00000523613 MTHFSP49914 203 aa20.22■□□□□ 0.83
HMBOX1-210ENST00000523613 CFAP53Q96M91 514 aa20.22■□□□□ 0.83
HMBOX1-210ENST00000523613 OVOS2A0A0J9YW53 1432 aa20.21■□□□□ 0.83
HMBOX1-210ENST00000523613 OVOS2Q6IE36 1432 aa20.21■□□□□ 0.83
HMBOX1-210ENST00000523613 SLAIN2Q9P270 581 aa20.21■□□□□ 0.83
HMBOX1-210ENST00000523613 PIK3C2AO00443 1686 aa20.2■□□□□ 0.82
HMBOX1-210ENST00000523613 USP31Q70CQ4 1352 aa20.2■□□□□ 0.82
HMBOX1-210ENST00000523613 KRT28Q7Z3Y7 464 aa20.19■□□□□ 0.82
HMBOX1-210ENST00000523613 ABTB2Q8N961 1025 aa20.19■□□□□ 0.82
HMBOX1-210ENST00000523613 AATKQ6ZMQ8 1374 aa20.18■□□□□ 0.82
HMBOX1-210ENST00000523613 NLRP6P59044 892 aa20.18■□□□□ 0.82
HMBOX1-210ENST00000523613 WDR43Q15061 677 aaKnown RBP eCLIP20.18■□□□□ 0.82
HMBOX1-210ENST00000523613 XPCQ01831 940 aaPredicted RBP20.17■□□□□ 0.82
HMBOX1-210ENST00000523613 NPHP3Q7Z494 1330 aa20.17■□□□□ 0.82
HMBOX1-210ENST00000523613 BRINP3Q76B58 766 aa20.16■□□□□ 0.82
HMBOX1-210ENST00000523613 POLKQ9UBT6 870 aa20.15■□□□□ 0.82
HMBOX1-210ENST00000523613 USP54Q70EL1 1684 aa20.15■□□□□ 0.82
HMBOX1-210ENST00000523613 TRPM3Q9HCF6 1732 aaPredicted RBP20.14■□□□□ 0.82
HMBOX1-210ENST00000523613 NUTM2GQ5VZR2 741 aa20.14■□□□□ 0.81
HMBOX1-210ENST00000523613 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
HMBOX1-210ENST00000523613 HNRNPUQ00839 825 aaKnown RBP eCLIP20.13■□□□□ 0.81
HMBOX1-210ENST00000523613 PPM1GO15355 546 aaPredicted RBP20.13■□□□□ 0.81
HMBOX1-210ENST00000523613 FBLN1P23142 703 aa20.13■□□□□ 0.81
HMBOX1-210ENST00000523613 SMG6Q86US8 1419 aaKnown RBP20.12■□□□□ 0.81
HMBOX1-210ENST00000523613 MAP2P11137 1827 aaKnown RBP20.12■□□□□ 0.81
HMBOX1-210ENST00000523613 SBNO1A3KN83 1393 aa20.12■□□□□ 0.81
HMBOX1-210ENST00000523613 INSRP06213 1382 aa20.12■□□□□ 0.81
HMBOX1-210ENST00000523613 LMOD2Q6P5Q4 547 aa20.11■□□□□ 0.81
HMBOX1-210ENST00000523613 DDX17Q92841 729 aaKnown RBP20.11■□□□□ 0.81
HMBOX1-210ENST00000523613 EMILIN1Q9Y6C2 1016 aa20.11■□□□□ 0.81
HMBOX1-210ENST00000523613 SOX12O15370 315 aa20.1■□□□□ 0.81
HMBOX1-210ENST00000523613 RRS1Q15050 365 aaKnown RBP20.1■□□□□ 0.81
HMBOX1-210ENST00000523613 MARF1Q9Y4F3 1742 aaKnown RBP20.1■□□□□ 0.81
HMBOX1-210ENST00000523613 ADAMTS8Q9UP79 889 aa20.1■□□□□ 0.81
HMBOX1-210ENST00000523613 PNPLA6Q8IY17 1366 aa20.1■□□□□ 0.81
HMBOX1-210ENST00000523613 PXDNQ92626 1479 aa20.09■□□□□ 0.81
HMBOX1-210ENST00000523613 CDK12Q9NYV4 1490 aaPredicted RBP20.09■□□□□ 0.81
HMBOX1-210ENST00000523613 NUDCQ9Y266 331 aa20.09■□□□□ 0.81
HMBOX1-210ENST00000523613 COL3A1P02461 1466 aaPredicted RBP20.09■□□□□ 0.81
HMBOX1-210ENST00000523613 SHPRHQ149N8 1683 aa20.09■□□□□ 0.81
HMBOX1-210ENST00000523613 DIAPH1O60610 1272 aaKnown RBP20.07■□□□□ 0.8
HMBOX1-210ENST00000523613 ALS2Q96Q42 1657 aa20.07■□□□□ 0.8
HMBOX1-210ENST00000523613 KCNH5Q8NCM2 988 aa20.07■□□□□ 0.8
HMBOX1-210ENST00000523613 BLMP54132 1417 aaPredicted RBP20.06■□□□□ 0.8
HMBOX1-210ENST00000523613 TNS3Q68CZ2 1445 aa20.06■□□□□ 0.8
HMBOX1-210ENST00000523613 MAP3K19Q56UN5 1328 aa20.05■□□□□ 0.8
HMBOX1-210ENST00000523613 ARHGEF10O15013 1369 aa20.05■□□□□ 0.8
HMBOX1-210ENST00000523613 USP19O94966 1318 aa20.04■□□□□ 0.8
HMBOX1-210ENST00000523613 SOS2Q07890 1332 aaPredicted RBP20.04■□□□□ 0.8
HMBOX1-210ENST00000523613 SPATA31A3Q5VYP0 1347 aa20.04■□□□□ 0.8
HMBOX1-210ENST00000523613 SLIT3O75094 1523 aa20.03■□□□□ 0.8
HMBOX1-210ENST00000523613 NHSL1Q5SYE7 1610 aa20.03■□□□□ 0.8
HMBOX1-210ENST00000523613 U2SURPO15042 1029 aaKnown RBP20.03■□□□□ 0.8
HMBOX1-210ENST00000523613 U2AF1L5P0DN76 240 aaPredicted RBP20.02■□□□□ 0.8
HMBOX1-210ENST00000523613 AMPHP49418 695 aa20.02■□□□□ 0.8
HMBOX1-210ENST00000523613 U2AF1Q01081 240 aaKnown RBP eCLIP20.02■□□□□ 0.8
HMBOX1-210ENST00000523613 FLT4P35916 1363 aa20.02■□□□□ 0.8
HMBOX1-210ENST00000523613 KIF24Q5T7B8 1368 aa20.02■□□□□ 0.8
HMBOX1-210ENST00000523613 NFAT5O94916 1531 aa20.02■□□□□ 0.79
HMBOX1-210ENST00000523613 TOM1O60784 492 aa20.02■□□□□ 0.79
HMBOX1-210ENST00000523613 ROBO1Q9Y6N7 1651 aa20.01■□□□□ 0.79
HMBOX1-210ENST00000523613 PEAK1Q9H792 1746 aa20.01■□□□□ 0.79
HMBOX1-210ENST00000523613 PLEKHG5O94827 1062 aa20.01■□□□□ 0.79
HMBOX1-210ENST00000523613 GCP02774 474 aa20.01■□□□□ 0.79
HMBOX1-210ENST00000523613 ZBED9Q6R2W3 1325 aa20.01■□□□□ 0.79
HMBOX1-210ENST00000523613 IL13P35225 146 aa19.99■□□□□ 0.79
HMBOX1-210ENST00000523613 RTL1A6NKG5 1358 aa19.99■□□□□ 0.79
HMBOX1-210ENST00000523613 IQSEC2Q5JU85 1478 aa19.99■□□□□ 0.79
HMBOX1-210ENST00000523613 CCDC146Q8IYE0 955 aa19.99■□□□□ 0.79
HMBOX1-210ENST00000523613 MED1Q15648 1581 aaPredicted RBP19.98■□□□□ 0.79
HMBOX1-210ENST00000523613 HSP90AB2PQ58FF8 381 aa19.97■□□□□ 0.79
HMBOX1-210ENST00000523613 LTN1O94822 1766 aa19.97■□□□□ 0.79
HMBOX1-210ENST00000523613 HOXC9P31274 260 aa19.96■□□□□ 0.79
HMBOX1-210ENST00000523613 RUNDC1Q96C34 613 aa19.96■□□□□ 0.79
HMBOX1-210ENST00000523613 AHDC1Q5TGY3 1603 aaPredicted RBP19.96■□□□□ 0.79
HMBOX1-210ENST00000523613 SENP3-EIF4A1A0A087X0R7 540 aa19.96■□□□□ 0.79
HMBOX1-210ENST00000523613 ZBTB7CA1YPR0 619 aa19.96■□□□□ 0.79
HMBOX1-210ENST00000523613 EIF4A2Q14240 407 aaKnown RBP19.96■□□□□ 0.79
HMBOX1-210ENST00000523613 PNNQ9H307 717 aaKnown RBP19.96■□□□□ 0.79
HMBOX1-210ENST00000523613 PHRF1Q9P1Y6 1649 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms