RNA–Protein interactions for RNA: ENST00000523530.1

DENND3-222, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 1,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-222ENST00000523530 LRRC7Q96NW7 1537 aa21.62■■□□□ 1.05
DENND3-222ENST00000523530 PNISRQ8TF01 805 aaKnown RBP21.62■■□□□ 1.05
DENND3-222ENST00000523530 MSH6P52701 1360 aa21.62■■□□□ 1.05
DENND3-222ENST00000523530 TTC21BQ7Z4L5 1316 aa21.62■■□□□ 1.05
DENND3-222ENST00000523530 ESCO1Q5FWF5 840 aa21.61■■□□□ 1.05
DENND3-222ENST00000523530 KIF1AQ12756 1690 aa21.61■■□□□ 1.05
DENND3-222ENST00000523530 NME9Q86XW9 330 aa21.61■■□□□ 1.05
DENND3-222ENST00000523530 C1orf167Q5SNV9 1468 aa21.59■■□□□ 1.05
DENND3-222ENST00000523530 TTC21AQ8NDW8 1320 aa21.59■■□□□ 1.05
DENND3-222ENST00000523530 CADPS2Q86UW7 1296 aa21.58■■□□□ 1.05
DENND3-222ENST00000523530 COG3Q96JB2 828 aa21.58■■□□□ 1.05
DENND3-222ENST00000523530 SSH2Q76I76 1423 aa21.58■■□□□ 1.04
DENND3-222ENST00000523530 MST1RQ04912 1400 aa21.57■■□□□ 1.04
DENND3-222ENST00000523530 HNRNPUQ00839 825 aaKnown RBP eCLIP21.56■■□□□ 1.04
DENND3-222ENST00000523530 ORAI2Q96SN7 254 aa21.55■■□□□ 1.04
DENND3-222ENST00000523530 PIK3C2AO00443 1686 aa21.55■■□□□ 1.04
DENND3-222ENST00000523530 MAP2P11137 1827 aaKnown RBP21.55■■□□□ 1.04
DENND3-222ENST00000523530 MTHFSP49914 203 aa21.54■■□□□ 1.04
DENND3-222ENST00000523530 WDR43Q15061 677 aaKnown RBP eCLIP21.54■■□□□ 1.04
DENND3-222ENST00000523530 CFAP53Q96M91 514 aa21.54■■□□□ 1.04
DENND3-222ENST00000523530 ZRANB1Q9UGI0 708 aa21.54■■□□□ 1.04
DENND3-222ENST00000523530 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
DENND3-222ENST00000523530 PSME1Q06323 249 aa21.53■■□□□ 1.04
DENND3-222ENST00000523530 OVOS2A0A0J9YW53 1432 aa21.52■■□□□ 1.04
DENND3-222ENST00000523530 OVOS2Q6IE36 1432 aa21.52■■□□□ 1.04
DENND3-222ENST00000523530 PAK3O75914 559 aaPredicted RBP21.52■■□□□ 1.04
DENND3-222ENST00000523530 SHPRHQ149N8 1683 aa21.51■■□□□ 1.03
DENND3-222ENST00000523530 USP54Q70EL1 1684 aa21.51■■□□□ 1.03
DENND3-222ENST00000523530 FOXO3O43524 673 aa21.48■■□□□ 1.03
DENND3-222ENST00000523530 AATKQ6ZMQ8 1374 aa21.48■■□□□ 1.03
DENND3-222ENST00000523530 USP31Q70CQ4 1352 aa21.48■■□□□ 1.03
DENND3-222ENST00000523530 TRPM3Q9HCF6 1732 aaPredicted RBP21.47■■□□□ 1.03
DENND3-222ENST00000523530 MARF1Q9Y4F3 1742 aaKnown RBP21.47■■□□□ 1.03
DENND3-222ENST00000523530 INSRP06213 1382 aa21.47■■□□□ 1.03
DENND3-222ENST00000523530 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
DENND3-222ENST00000523530 ABTB2Q8N961 1025 aa21.46■■□□□ 1.03
DENND3-222ENST00000523530 ADAMTS8Q9UP79 889 aa21.46■■□□□ 1.03
DENND3-222ENST00000523530 NLRP6P59044 892 aa21.45■■□□□ 1.02
DENND3-222ENST00000523530 POLKQ9UBT6 870 aa21.45■■□□□ 1.02
DENND3-222ENST00000523530 BLMP54132 1417 aaPredicted RBP21.45■■□□□ 1.02
DENND3-222ENST00000523530 PPM1GO15355 546 aaPredicted RBP21.44■■□□□ 1.02
DENND3-222ENST00000523530 FBLN1P23142 703 aa21.44■■□□□ 1.02
DENND3-222ENST00000523530 SMG6Q86US8 1419 aaKnown RBP21.44■■□□□ 1.02
DENND3-222ENST00000523530 KRT28Q7Z3Y7 464 aa21.44■■□□□ 1.02
DENND3-222ENST00000523530 LTBP4Q8N2S1 1624 aa21.43■■□□□ 1.02
DENND3-222ENST00000523530 XPCQ01831 940 aaPredicted RBP21.43■■□□□ 1.02
DENND3-222ENST00000523530 COL3A1P02461 1466 aaPredicted RBP21.43■■□□□ 1.02
DENND3-222ENST00000523530 NUTM2GQ5VZR2 741 aa21.42■■□□□ 1.02
DENND3-222ENST00000523530 CDK12Q9NYV4 1490 aaPredicted RBP21.42■■□□□ 1.02
DENND3-222ENST00000523530 RRS1Q15050 365 aaKnown RBP21.41■■□□□ 1.02
DENND3-222ENST00000523530 SLAIN2Q9P270 581 aa21.41■■□□□ 1.02
DENND3-222ENST00000523530 EMILIN1Q9Y6C2 1016 aa21.41■■□□□ 1.02
DENND3-222ENST00000523530 ZBED9Q6R2W3 1325 aa21.41■■□□□ 1.02
DENND3-222ENST00000523530 NPHP3Q7Z494 1330 aa21.41■■□□□ 1.02
DENND3-222ENST00000523530 SOX12O15370 315 aa21.4■■□□□ 1.02
DENND3-222ENST00000523530 NUDCQ9Y266 331 aa21.4■■□□□ 1.02
DENND3-222ENST00000523530 PNPLA6Q8IY17 1366 aa21.4■■□□□ 1.02
DENND3-222ENST00000523530 ALS2Q96Q42 1657 aa21.39■■□□□ 1.02
DENND3-222ENST00000523530 DIAPH1O60610 1272 aaKnown RBP21.39■■□□□ 1.01
DENND3-222ENST00000523530 BRINP3Q76B58 766 aa21.38■■□□□ 1.01
DENND3-222ENST00000523530 LMOD2Q6P5Q4 547 aa21.37■■□□□ 1.01
DENND3-222ENST00000523530 PEAK1Q9H792 1746 aa21.37■■□□□ 1.01
DENND3-222ENST00000523530 LTN1O94822 1766 aa21.36■■□□□ 1.01
DENND3-222ENST00000523530 SENP3-EIF4A1A0A087X0R7 540 aa21.36■■□□□ 1.01
DENND3-222ENST00000523530 U2SURPO15042 1029 aaKnown RBP21.36■■□□□ 1.01
DENND3-222ENST00000523530 DDX17Q92841 729 aaKnown RBP21.36■■□□□ 1.01
DENND3-222ENST00000523530 PXDNQ92626 1479 aa21.35■■□□□ 1.01
DENND3-222ENST00000523530 SBNO1A3KN83 1393 aa21.35■■□□□ 1.01
DENND3-222ENST00000523530 U2AF1L5P0DN76 240 aaPredicted RBP21.35■■□□□ 1.01
DENND3-222ENST00000523530 U2AF1Q01081 240 aaKnown RBP eCLIP21.35■■□□□ 1.01
DENND3-222ENST00000523530 CCDC146Q8IYE0 955 aa21.34■■□□□ 1.01
DENND3-222ENST00000523530 MAP3K19Q56UN5 1328 aa21.33■■□□□ 1
DENND3-222ENST00000523530 NHSL1Q5SYE7 1610 aa21.32■■□□□ 1
DENND3-222ENST00000523530 SLIT3O75094 1523 aa21.32■■□□□ 1
DENND3-222ENST00000523530 TNS3Q68CZ2 1445 aa21.32■■□□□ 1
DENND3-222ENST00000523530 KCNH5Q8NCM2 988 aa21.31■■□□□ 1
DENND3-222ENST00000523530 NFAT5O94916 1531 aa21.31■■□□□ 1
DENND3-222ENST00000523530 FLT4P35916 1363 aa21.31■■□□□ 1
DENND3-222ENST00000523530 AMPHP49418 695 aa21.31■■□□□ 1
DENND3-222ENST00000523530 SALL2Q9Y467 1007 aaPredicted RBP21.31■■□□□ 1
DENND3-222ENST00000523530 RUNDC1Q96C34 613 aa21.3■■□□□ 1
DENND3-222ENST00000523530 KIF24Q5T7B8 1368 aa21.29■■□□□ 1
DENND3-222ENST00000523530 PHRF1Q9P1Y6 1649 aaKnown RBP21.28■■□□□ 1
DENND3-222ENST00000523530 ROBO1Q9Y6N7 1651 aa21.28■■□□□ 1
DENND3-222ENST00000523530 PLEKHG5O94827 1062 aa21.28■■□□□ 1
DENND3-222ENST00000523530 IL13P35225 146 aa21.28■■□□□ 1
DENND3-222ENST00000523530 USP19O94966 1318 aa21.27■■□□□ 1
DENND3-222ENST00000523530 ARHGEF10O15013 1369 aa21.27■■□□□ 1
DENND3-222ENST00000523530 PNNQ9H307 717 aaKnown RBP21.27■□□□□ 0.99
DENND3-222ENST00000523530 SPATA31A3Q5VYP0 1347 aa21.27■□□□□ 0.99
DENND3-222ENST00000523530 MED1Q15648 1581 aaPredicted RBP21.26■□□□□ 0.99
DENND3-222ENST00000523530 RTL1A6NKG5 1358 aa21.26■□□□□ 0.99
DENND3-222ENST00000523530 APAF1O14727 1248 aa21.26■□□□□ 0.99
DENND3-222ENST00000523530 HSP90AB2PQ58FF8 381 aa21.26■□□□□ 0.99
DENND3-222ENST00000523530 CRYBG1Q9Y4K1 1723 aa21.25■□□□□ 0.99
DENND3-222ENST00000523530 SOS2Q07890 1332 aaPredicted RBP21.25■□□□□ 0.99
DENND3-222ENST00000523530 GCP02774 474 aa21.25■□□□□ 0.99
DENND3-222ENST00000523530 EIF4A2Q14240 407 aaKnown RBP21.25■□□□□ 0.99
DENND3-222ENST00000523530 IQSEC2Q5JU85 1478 aa21.24■□□□□ 0.99
DENND3-222ENST00000523530 RGPD1P0DJD0 1748 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms