RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 ATP7AQ04656 1500 aa9.76□□□□□ -0.85
CSMD1-211ENST00000523062 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
CSMD1-211ENST00000523062 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.75□□□□□ -0.85
CSMD1-211ENST00000523062 IQGAP3Q86VI3 1631 aa9.74□□□□□ -0.85
CSMD1-211ENST00000523062 ZNF518AQ6AHZ1 1483 aa9.74□□□□□ -0.85
CSMD1-211ENST00000523062 NEO1Q92859 1461 aa9.73□□□□□ -0.85
CSMD1-211ENST00000523062 AFAP1Q8N556 730 aa9.73□□□□□ -0.85
CSMD1-211ENST00000523062 L3MBTL2Q969R5 705 aa9.73□□□□□ -0.85
CSMD1-211ENST00000523062 POGZQ7Z3K3 1410 aa9.73□□□□□ -0.85
CSMD1-211ENST00000523062 GLI2P10070 1586 aa9.72□□□□□ -0.85
CSMD1-211ENST00000523062 CYB5RLQ6IPT4 315 aa9.72□□□□□ -0.85
CSMD1-211ENST00000523062 PACS2Q86VP3 889 aa9.72□□□□□ -0.85
CSMD1-211ENST00000523062 KDM5CP41229 1560 aa9.71□□□□□ -0.85
CSMD1-211ENST00000523062 EIF2AK4Q9P2K8 1649 aaKnown RBP9.71□□□□□ -0.85
CSMD1-211ENST00000523062 MTRQ99707 1265 aa9.71□□□□□ -0.86
CSMD1-211ENST00000523062 DEPDC5O75140 1603 aa9.7□□□□□ -0.86
CSMD1-211ENST00000523062 MAP3K4Q9Y6R4 1608 aa9.7□□□□□ -0.86
CSMD1-211ENST00000523062 GTPBP6O43824 516 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-211ENST00000523062 DHX29Q7Z478 1369 aaKnown RBP9.69□□□□□ -0.86
CSMD1-211ENST00000523062 MLH3Q9UHC1 1453 aa9.69□□□□□ -0.86
CSMD1-211ENST00000523062 KIDINS220Q9ULH0 1771 aa9.68□□□□□ -0.86
CSMD1-211ENST00000523062 HECW2Q9P2P5 1572 aa9.68□□□□□ -0.86
CSMD1-211ENST00000523062 ATP10AO60312 1499 aa9.68□□□□□ -0.86
CSMD1-211ENST00000523062 CCDC144AA2RUR9 1427 aa9.68□□□□□ -0.86
CSMD1-211ENST00000523062 KANK1Q14678 1352 aa9.68□□□□□ -0.86
CSMD1-211ENST00000523062 VWDEQ8N2E2 1590 aa9.67□□□□□ -0.86
CSMD1-211ENST00000523062 PRDM15P57071 1507 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-211ENST00000523062 GGCXP38435 758 aa9.67□□□□□ -0.86
CSMD1-211ENST00000523062 TSKSQ9UJT2 592 aa9.67□□□□□ -0.86
CSMD1-211ENST00000523062 DIP2BQ9P265 1576 aa9.67□□□□□ -0.86
CSMD1-211ENST00000523062 A2MP01023 1474 aa9.66□□□□□ -0.86
CSMD1-211ENST00000523062 PLA2R1Q13018 1463 aa9.66□□□□□ -0.86
CSMD1-211ENST00000523062 UHRF1BP1Q6BDS2 1440 aa9.66□□□□□ -0.86
CSMD1-211ENST00000523062 EIF4G2P78344 907 aaKnown RBP eCLIP9.66□□□□□ -0.86
CSMD1-211ENST00000523062 TET3O43151 1660 aa9.66□□□□□ -0.86
CSMD1-211ENST00000523062 MROH1Q8NDA8 1641 aa9.65□□□□□ -0.86
CSMD1-211ENST00000523062 NBPF8Q3BBV2 869 aa9.65□□□□□ -0.86
CSMD1-211ENST00000523062 RBM33Q96EV2 1170 aaKnown RBP9.65□□□□□ -0.86
CSMD1-211ENST00000523062 RNF17Q9BXT8 1623 aaKnown RBP9.64□□□□□ -0.87
CSMD1-211ENST00000523062 KIF3BO15066 747 aa9.64□□□□□ -0.87
CSMD1-211ENST00000523062 HSPA5P11021 654 aaKnown RBP9.64□□□□□ -0.87
CSMD1-211ENST00000523062 SAMD7Q7Z3H4 446 aa9.64□□□□□ -0.87
CSMD1-211ENST00000523062 ZNF516Q92618 1163 aa9.64□□□□□ -0.87
CSMD1-211ENST00000523062 RALGAPBQ86X10 1494 aa9.64□□□□□ -0.87
CSMD1-211ENST00000523062 TRPM2O94759 1503 aa9.63□□□□□ -0.87
CSMD1-211ENST00000523062 LMTK2Q8IWU2 1503 aa9.63□□□□□ -0.87
CSMD1-211ENST00000523062 FAM69CQ0P6D2 419 aa9.63□□□□□ -0.87
CSMD1-211ENST00000523062 TMUB1Q9BVT8 246 aa9.63□□□□□ -0.87
CSMD1-211ENST00000523062 ABCA6Q8N139 1617 aa9.63□□□□□ -0.87
CSMD1-211ENST00000523062 FRMPD1Q5SYB0 1578 aa9.63□□□□□ -0.87
CSMD1-211ENST00000523062 BCORL1Q5H9F3 1711 aa9.62□□□□□ -0.87
CSMD1-211ENST00000523062 E9PCH4 1651 aa9.62□□□□□ -0.87
CSMD1-211ENST00000523062 CAMK2BQ13554 666 aa9.62□□□□□ -0.87
CSMD1-211ENST00000523062 PKDCCQ504Y2 493 aa9.62□□□□□ -0.87
CSMD1-211ENST00000523062 PTPRTO14522 1441 aa9.62□□□□□ -0.87
CSMD1-211ENST00000523062 RICTORQ6R327 1708 aa9.62□□□□□ -0.87
CSMD1-211ENST00000523062 EFCAB6Q5THR3 1501 aa9.61□□□□□ -0.87
CSMD1-211ENST00000523062 ZMYM4Q5VZL5 1548 aa9.61□□□□□ -0.87
CSMD1-211ENST00000523062 DGAT1O75907 488 aa9.61□□□□□ -0.87
CSMD1-211ENST00000523062 HIRIP3Q9BW71 556 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-211ENST00000523062 DIP2CQ9Y2E4 1556 aa9.61□□□□□ -0.87
CSMD1-211ENST00000523062 SPHKAPQ2M3C7 1700 aa9.61□□□□□ -0.87
CSMD1-211ENST00000523062 SPATA31E1Q6ZUB1 1445 aa9.6□□□□□ -0.87
CSMD1-211ENST00000523062 DDX10Q13206 875 aaKnown RBP9.6□□□□□ -0.87
CSMD1-211ENST00000523062 ZNF326Q5BKZ1 582 aaKnown RBP9.6□□□□□ -0.87
CSMD1-211ENST00000523062 PRAG1Q86YV5 1406 aa9.59□□□□□ -0.87
CSMD1-211ENST00000523062 DPYSL4O14531 572 aa9.59□□□□□ -0.87
CSMD1-211ENST00000523062 RAPGEF3O95398 923 aa9.59□□□□□ -0.87
CSMD1-211ENST00000523062 MYT1Q01538 1121 aa9.59□□□□□ -0.87
CSMD1-211ENST00000523062 TREML4Q6UXN2 200 aa9.59□□□□□ -0.87
CSMD1-211ENST00000523062 CADPS2Q86UW7 1296 aa9.59□□□□□ -0.87
CSMD1-211ENST00000523062 DDX12PQ92771 950 aa9.59□□□□□ -0.87
CSMD1-211ENST00000523062 USP47Q96K76 1375 aa9.59□□□□□ -0.87
CSMD1-211ENST00000523062 PPRC1Q5VV67 1664 aaKnown RBP9.58□□□□□ -0.88
CSMD1-211ENST00000523062 SMAPO00193 183 aa9.58□□□□□ -0.88
CSMD1-211ENST00000523062 HDGFP51858 240 aaKnown RBP9.58□□□□□ -0.88
CSMD1-211ENST00000523062 TSR1Q2NL82 804 aaKnown RBP9.58□□□□□ -0.88
CSMD1-211ENST00000523062 DCAF11Q8TEB1 546 aa9.58□□□□□ -0.88
CSMD1-211ENST00000523062 NEURL4Q96JN8 1562 aa9.58□□□□□ -0.88
CSMD1-211ENST00000523062 CLTCL1P53675 1640 aa9.57□□□□□ -0.88
CSMD1-211ENST00000523062 CENPBP07199 599 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-211ENST00000523062 EN1Q05925 392 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-211ENST00000523062 NKX2-3Q8TAU0 364 aa9.57□□□□□ -0.88
CSMD1-211ENST00000523062 FAM198AQ9UFP1 575 aa9.57□□□□□ -0.88
CSMD1-211ENST00000523062 KDM2AQ9Y2K7 1162 aa9.57□□□□□ -0.88
CSMD1-211ENST00000523062 ABCC3O15438 1527 aa9.56□□□□□ -0.88
CSMD1-211ENST00000523062 CEP152O94986 1710 aa9.56□□□□□ -0.88
CSMD1-211ENST00000523062 CCDC7Q96M83 1385 aa9.56□□□□□ -0.88
CSMD1-211ENST00000523062 POTECB2RU33 542 aa9.56□□□□□ -0.88
CSMD1-211ENST00000523062 C3orf80F5H4A9 247 aa9.56□□□□□ -0.88
CSMD1-211ENST00000523062 LAMC1P11047 1609 aa9.56□□□□□ -0.88
CSMD1-211ENST00000523062 TRPM1Q7Z4N2 1603 aa9.56□□□□□ -0.88
CSMD1-211ENST00000523062 YEATS2Q9ULM3 1422 aa9.56□□□□□ -0.88
CSMD1-211ENST00000523062 WASHC2AQ641Q2 1341 aa9.56□□□□□ -0.88
CSMD1-211ENST00000523062 ROCK2O75116 1388 aaKnown RBP9.55□□□□□ -0.88
CSMD1-211ENST00000523062 GPRASP1Q5JY77 1395 aa9.55□□□□□ -0.88
CSMD1-211ENST00000523062 RGL3Q3MIN7 710 aa9.55□□□□□ -0.88
CSMD1-211ENST00000523062 TRIM67Q6ZTA4 783 aa9.55□□□□□ -0.88
CSMD1-211ENST00000523062 NECTIN2Q92692 538 aa9.55□□□□□ -0.88
CSMD1-211ENST00000523062 CDCA7LQ96GN5 454 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms