RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 EVA1BQ9NVM1 165 aa8.56□□□□□ -1.04
SKP1-210ENST00000522855 POLR3EQ9NVU0 708 aa8.56□□□□□ -1.04
SKP1-210ENST00000522855 AXIN1O15169 862 aa8.55□□□□□ -1.04
SKP1-210ENST00000522855 SH3BP2P78314 561 aa8.55□□□□□ -1.04
SKP1-210ENST00000522855 UNC93B1Q9H1C4 597 aa8.55□□□□□ -1.04
SKP1-210ENST00000522855 HRCP23327 699 aa8.54□□□□□ -1.04
SKP1-210ENST00000522855 KCNH2Q12809 1159 aa8.54□□□□□ -1.04
SKP1-210ENST00000522855 TUSC1Q2TAM9 212 aa8.54□□□□□ -1.04
SKP1-210ENST00000522855 PRPF38BQ5VTL8 546 aaKnown RBP8.54□□□□□ -1.04
SKP1-210ENST00000522855 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.54□□□□□ -1.04
SKP1-210ENST00000522855 LIMD1Q9UGP4 676 aa8.54□□□□□ -1.04
SKP1-210ENST00000522855 F12P00748 615 aaPredicted RBP8.53□□□□□ -1.04
SKP1-210ENST00000522855 LYPD8Q6UX82 237 aa8.53□□□□□ -1.04
SKP1-210ENST00000522855 RIC3Q7Z5B4 369 aa8.53□□□□□ -1.04
SKP1-210ENST00000522855 HPS1Q92902 700 aa8.53□□□□□ -1.04
SKP1-210ENST00000522855 ZBTB3Q9H5J0 574 aa8.53□□□□□ -1.04
SKP1-210ENST00000522855 LCE2AQ5TA79 106 aaPredicted RBP8.52□□□□□ -1.05
SKP1-210ENST00000522855 PROCA1Q8NCQ7 364 aaPredicted RBP8.52□□□□□ -1.05
SKP1-210ENST00000522855 CABLES1Q8TDN4 633 aa8.52□□□□□ -1.05
SKP1-210ENST00000522855 GMPR2Q9P2T1 348 aaKnown RBP8.52□□□□□ -1.05
SKP1-210ENST00000522855 QPCTQ16769 361 aa8.5□□□□□ -1.05
SKP1-210ENST00000522855 ZNF511Q8NB15 262 aa8.5□□□□□ -1.05
SKP1-210ENST00000522855 EHBP1Q8NDI1 1231 aa8.5□□□□□ -1.05
SKP1-210ENST00000522855 ZMYND15Q9H091 742 aa8.5□□□□□ -1.05
SKP1-210ENST00000522855 ATP13A2Q9NQ11 1180 aa8.5□□□□□ -1.05
SKP1-210ENST00000522855 LILRB3O75022 631 aa8.49□□□□□ -1.05
SKP1-210ENST00000522855 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
SKP1-210ENST00000522855 BAP1Q92560 729 aa8.49□□□□□ -1.05
SKP1-210ENST00000522855 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
SKP1-210ENST00000522855 MCM6Q14566 821 aa8.48□□□□□ -1.05
SKP1-210ENST00000522855 MAP10Q9P2G4 905 aa8.48□□□□□ -1.05
SKP1-210ENST00000522855 ALDH1A1P00352 501 aa8.47□□□□□ -1.05
SKP1-210ENST00000522855 UBTFP17480 764 aaKnown RBP8.47□□□□□ -1.05
SKP1-210ENST00000522855 RFC5P40937 340 aa8.47□□□□□ -1.05
SKP1-210ENST00000522855 TMEM259Q4ZIN3 620 aa8.47□□□□□ -1.05
SKP1-210ENST00000522855 PPP2R2DQ66LE6 453 aa8.47□□□□□ -1.05
SKP1-210ENST00000522855 MPNDQ8N594 471 aa8.47□□□□□ -1.05
SKP1-210ENST00000522855 TLL2Q9Y6L7 1015 aa8.47□□□□□ -1.05
SKP1-210ENST00000522855 BANK1Q8NDB2 785 aa8.46□□□□□ -1.06
SKP1-210ENST00000522855 CSPP1Q1MSJ5 1256 aa8.45□□□□□ -1.06
SKP1-210ENST00000522855 TRIM47Q96LD4 638 aa8.45□□□□□ -1.06
SKP1-210ENST00000522855 NUTM2BA6NNL0 878 aaPredicted RBP8.44□□□□□ -1.06
SKP1-210ENST00000522855 NUTM2EB1AL46 878 aaPredicted RBP8.44□□□□□ -1.06
SKP1-210ENST00000522855 APBB1O00213 710 aa8.44□□□□□ -1.06
SKP1-210ENST00000522855 NUTM2DQ5VT03 806 aaPredicted RBP8.44□□□□□ -1.06
SKP1-210ENST00000522855 NUTM2AQ8IVF1 878 aaPredicted RBP8.44□□□□□ -1.06
SKP1-210ENST00000522855 C11orf95C9JLR9 678 aaPredicted RBP8.43□□□□□ -1.06
SKP1-210ENST00000522855 SNRPBP14678 240 aaKnown RBP8.43□□□□□ -1.06
SKP1-210ENST00000522855 VARSP26640 1264 aaKnown RBP8.43□□□□□ -1.06
SKP1-210ENST00000522855 RTL5Q5HYW3 569 aaPredicted RBP8.43□□□□□ -1.06
SKP1-210ENST00000522855 TREML4Q6UXN2 200 aa8.43□□□□□ -1.06
SKP1-210ENST00000522855 RAD21O60216 631 aa8.42□□□□□ -1.06
SKP1-210ENST00000522855 CTHP32929 405 aa8.42□□□□□ -1.06
SKP1-210ENST00000522855 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
SKP1-210ENST00000522855 FBXO31Q5XUX0 539 aaPredicted RBP8.42□□□□□ -1.06
SKP1-210ENST00000522855 TRIM46Q7Z4K8 759 aa8.42□□□□□ -1.06
SKP1-210ENST00000522855 SUPT5HO00267 1087 aaKnown RBP8.41□□□□□ -1.06
SKP1-210ENST00000522855 SOCS7O14512 581 aa8.41□□□□□ -1.06
SKP1-210ENST00000522855 FOXJ1Q92949 421 aa8.41□□□□□ -1.06
SKP1-210ENST00000522855 A6NJR5 290 aa8.4□□□□□ -1.06
SKP1-210ENST00000522855 NFX1Q12986 1120 aaKnown RBP8.4□□□□□ -1.06
SKP1-210ENST00000522855 LCE2CQ5TA81 110 aa8.4□□□□□ -1.06
SKP1-210ENST00000522855 CDK15Q96Q40 435 aa8.4□□□□□ -1.06
SKP1-210ENST00000522855 WASF2Q9Y6W5 498 aa8.4□□□□□ -1.06
SKP1-210ENST00000522855 BMP1P13497 986 aa8.39□□□□□ -1.07
SKP1-210ENST00000522855 SH3RF1Q7Z6J0 888 aa8.39□□□□□ -1.07
SKP1-210ENST00000522855 C1QTNF2Q9BXJ5 285 aa8.39□□□□□ -1.07
SKP1-210ENST00000522855 KLF16Q9BXK1 252 aaPredicted RBP8.39□□□□□ -1.07
SKP1-210ENST00000522855 SENP2Q9HC62 589 aa8.39□□□□□ -1.07
SKP1-210ENST00000522855 PRM3Q9NNZ6 103 aa8.39□□□□□ -1.07
SKP1-210ENST00000522855 AP1G2O75843 785 aa8.38□□□□□ -1.07
SKP1-210ENST00000522855 NNTQ13423 1086 aa8.38□□□□□ -1.07
SKP1-210ENST00000522855 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
SKP1-210ENST00000522855 CAPN5O15484 640 aaPredicted RBP8.37□□□□□ -1.07
SKP1-210ENST00000522855 ADH1CP00326 375 aa8.37□□□□□ -1.07
SKP1-210ENST00000522855 FAM174AQ8TBP5 190 aa8.37□□□□□ -1.07
SKP1-210ENST00000522855 KIFC2Q96AC6 838 aa8.37□□□□□ -1.07
SKP1-210ENST00000522855 USP17L8P0C7I0 530 aa8.36□□□□□ -1.07
SKP1-210ENST00000522855 TIMP2P16035 220 aa8.36□□□□□ -1.07
SKP1-210ENST00000522855 SH3BP5LQ7L8J4 393 aa8.36□□□□□ -1.07
SKP1-210ENST00000522855 PROSER2Q86WR7 435 aaPredicted RBP8.36□□□□□ -1.07
SKP1-210ENST00000522855 TSC1Q92574 1164 aa8.36□□□□□ -1.07
SKP1-210ENST00000522855 CLUAP1Q96AJ1 413 aa8.36□□□□□ -1.07
SKP1-210ENST00000522855 WWC1Q8IX03 1113 aa8.35□□□□□ -1.07
SKP1-210ENST00000522855 SNRKQ9NRH2 765 aa8.35□□□□□ -1.07
SKP1-210ENST00000522855 NR3C2P08235 984 aa8.34□□□□□ -1.07
SKP1-210ENST00000522855 BPHLQ86WA6 291 aaPredicted RBP8.34□□□□□ -1.07
SKP1-210ENST00000522855 TRMT44Q8IYL2 757 aaKnown RBP8.34□□□□□ -1.07
SKP1-210ENST00000522855 MTMR14Q8NCE2 650 aa8.34□□□□□ -1.07
SKP1-210ENST00000522855 ARXQ96QS3 562 aa8.34□□□□□ -1.07
SKP1-210ENST00000522855 WFS1O76024 890 aa8.33□□□□□ -1.08
SKP1-210ENST00000522855 GRM5P41594 1212 aa8.33□□□□□ -1.08
SKP1-210ENST00000522855 CTDSPL2Q05D32 466 aa8.33□□□□□ -1.08
SKP1-210ENST00000522855 NBPF14Q5TI25 921 aa8.33□□□□□ -1.08
SKP1-210ENST00000522855 ARMC2Q8NEN0 867 aa8.33□□□□□ -1.08
SKP1-210ENST00000522855 COG6Q9Y2V7 657 aa8.33□□□□□ -1.08
SKP1-210ENST00000522855 TRAK2O60296 914 aa8.32□□□□□ -1.08
SKP1-210ENST00000522855 MAP4K5Q9Y4K4 846 aa8.32□□□□□ -1.08
SKP1-210ENST00000522855 TERTO14746 1132 aaKnown RBP8.31□□□□□ -1.08
SKP1-210ENST00000522855 WIPF1O43516 503 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms