RNA–Protein interactions for RNA: ENST00000522665.5

NDRG1-223, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-223ENST00000522665 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.44■□□□□ 0.86
NDRG1-223ENST00000522665 NLRP13Q86W25 1043 aa20.43■□□□□ 0.86
NDRG1-223ENST00000522665 TTC21BQ7Z4L5 1316 aa20.43■□□□□ 0.86
NDRG1-223ENST00000522665 FYB1O15117 783 aa20.42■□□□□ 0.86
NDRG1-223ENST00000522665 ORAI2Q96SN7 254 aa20.42■□□□□ 0.86
NDRG1-223ENST00000522665 GGNBP2Q9H3C7 697 aa20.4■□□□□ 0.86
NDRG1-223ENST00000522665 PSME1Q06323 249 aa20.39■□□□□ 0.85
NDRG1-223ENST00000522665 MRS2Q9HD23 443 aa20.39■□□□□ 0.85
NDRG1-223ENST00000522665 PPP2R1AP30153 589 aa20.38■□□□□ 0.85
NDRG1-223ENST00000522665 SLAIN2Q9P270 581 aa20.38■□□□□ 0.85
NDRG1-223ENST00000522665 NME9Q86XW9 330 aa20.37■□□□□ 0.85
NDRG1-223ENST00000522665 COG3Q96JB2 828 aa20.37■□□□□ 0.85
NDRG1-223ENST00000522665 OVOS2A0A0J9YW53 1432 aa20.36■□□□□ 0.85
NDRG1-223ENST00000522665 OVOS2Q6IE36 1432 aa20.36■□□□□ 0.85
NDRG1-223ENST00000522665 PIK3C2AO00443 1686 aa20.36■□□□□ 0.85
NDRG1-223ENST00000522665 NPHP3Q7Z494 1330 aa20.36■□□□□ 0.85
NDRG1-223ENST00000522665 SCAF1Q9H7N4 1312 aaKnown RBP20.36■□□□□ 0.85
NDRG1-223ENST00000522665 USP54Q70EL1 1684 aa20.35■□□□□ 0.85
NDRG1-223ENST00000522665 USP31Q70CQ4 1352 aa20.35■□□□□ 0.85
NDRG1-223ENST00000522665 FOXO3O43524 673 aa20.35■□□□□ 0.85
NDRG1-223ENST00000522665 IQSEC2Q5JU85 1478 aa20.35■□□□□ 0.85
NDRG1-223ENST00000522665 BRINP3Q76B58 766 aa20.34■□□□□ 0.85
NDRG1-223ENST00000522665 TRPM3Q9HCF6 1732 aaPredicted RBP20.33■□□□□ 0.85
NDRG1-223ENST00000522665 PAK3O75914 559 aaPredicted RBP20.33■□□□□ 0.85
NDRG1-223ENST00000522665 TNNT2P45379 298 aaPredicted RBP20.32■□□□□ 0.84
NDRG1-223ENST00000522665 KRT28Q7Z3Y7 464 aa20.31■□□□□ 0.84
NDRG1-223ENST00000522665 SBNO1A3KN83 1393 aa20.31■□□□□ 0.84
NDRG1-223ENST00000522665 AATKQ6ZMQ8 1374 aa20.31■□□□□ 0.84
NDRG1-223ENST00000522665 PXDNQ92626 1479 aa20.3■□□□□ 0.84
NDRG1-223ENST00000522665 CCDC184Q52MB2 194 aa20.3■□□□□ 0.84
NDRG1-223ENST00000522665 ABTB2Q8N961 1025 aa20.29■□□□□ 0.84
NDRG1-223ENST00000522665 ZRANB1Q9UGI0 708 aa20.29■□□□□ 0.84
NDRG1-223ENST00000522665 NLRP6P59044 892 aa20.28■□□□□ 0.84
NDRG1-223ENST00000522665 CFAP53Q96M91 514 aa20.28■□□□□ 0.84
NDRG1-223ENST00000522665 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.84
NDRG1-223ENST00000522665 NHSL1Q5SYE7 1610 aa20.27■□□□□ 0.84
NDRG1-223ENST00000522665 ALS2Q96Q42 1657 aa20.27■□□□□ 0.84
NDRG1-223ENST00000522665 XPCQ01831 940 aaPredicted RBP20.27■□□□□ 0.84
NDRG1-223ENST00000522665 TNS3Q68CZ2 1445 aa20.27■□□□□ 0.83
NDRG1-223ENST00000522665 MARF1Q9Y4F3 1742 aaKnown RBP20.26■□□□□ 0.83
NDRG1-223ENST00000522665 MTHFSP49914 203 aa20.25■□□□□ 0.83
NDRG1-223ENST00000522665 ROBO1Q9Y6N7 1651 aa20.25■□□□□ 0.83
NDRG1-223ENST00000522665 ARHGEF10O15013 1369 aa20.24■□□□□ 0.83
NDRG1-223ENST00000522665 TOM1O60784 492 aa20.24■□□□□ 0.83
NDRG1-223ENST00000522665 CDK12Q9NYV4 1490 aaPredicted RBP20.24■□□□□ 0.83
NDRG1-223ENST00000522665 PNISRQ8TF01 805 aaKnown RBP20.23■□□□□ 0.83
NDRG1-223ENST00000522665 AHDC1Q5TGY3 1603 aaPredicted RBP20.23■□□□□ 0.83
NDRG1-223ENST00000522665 SOS2Q07890 1332 aaPredicted RBP20.23■□□□□ 0.83
NDRG1-223ENST00000522665 SLIT3O75094 1523 aa20.22■□□□□ 0.83
NDRG1-223ENST00000522665 DDX17Q92841 729 aaKnown RBP20.22■□□□□ 0.83
NDRG1-223ENST00000522665 USP19O94966 1318 aa20.22■□□□□ 0.83
NDRG1-223ENST00000522665 MED1Q15648 1581 aaPredicted RBP20.21■□□□□ 0.83
NDRG1-223ENST00000522665 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.83
NDRG1-223ENST00000522665 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
NDRG1-223ENST00000522665 FAM9BQ8IZU0 186 aa20.21■□□□□ 0.83
NDRG1-223ENST00000522665 KCNH5Q8NCM2 988 aa20.21■□□□□ 0.83
NDRG1-223ENST00000522665 POLKQ9UBT6 870 aa20.21■□□□□ 0.83
NDRG1-223ENST00000522665 SPATA31A3Q5VYP0 1347 aa20.21■□□□□ 0.83
NDRG1-223ENST00000522665 INSRP06213 1382 aa20.21■□□□□ 0.83
NDRG1-223ENST00000522665 NUTM2GQ5VZR2 741 aa20.2■□□□□ 0.82
NDRG1-223ENST00000522665 PNPLA6Q8IY17 1366 aa20.2■□□□□ 0.82
NDRG1-223ENST00000522665 NFAT5O94916 1531 aa20.19■□□□□ 0.82
NDRG1-223ENST00000522665 MAP2P11137 1827 aaKnown RBP20.19■□□□□ 0.82
NDRG1-223ENST00000522665 KIF24Q5T7B8 1368 aa20.19■□□□□ 0.82
NDRG1-223ENST00000522665 COL3A1P02461 1466 aaPredicted RBP20.18■□□□□ 0.82
NDRG1-223ENST00000522665 CERKQ8TCT0 537 aa20.18■□□□□ 0.82
NDRG1-223ENST00000522665 YTHDC1Q96MU7 727 aaKnown RBP20.17■□□□□ 0.82
NDRG1-223ENST00000522665 EMILIN1Q9Y6C2 1016 aa20.17■□□□□ 0.82
NDRG1-223ENST00000522665 RTL1A6NKG5 1358 aa20.17■□□□□ 0.82
NDRG1-223ENST00000522665 SHPRHQ149N8 1683 aa20.16■□□□□ 0.82
NDRG1-223ENST00000522665 UBAP1LF5GYI3 381 aa20.16■□□□□ 0.82
NDRG1-223ENST00000522665 PPM1GO15355 546 aaPredicted RBP20.16■□□□□ 0.82
NDRG1-223ENST00000522665 SOX12O15370 315 aa20.16■□□□□ 0.82
NDRG1-223ENST00000522665 RRS1Q15050 365 aaKnown RBP20.16■□□□□ 0.82
NDRG1-223ENST00000522665 ILDR1Q86SU0 546 aaPredicted RBP20.15■□□□□ 0.82
NDRG1-223ENST00000522665 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
NDRG1-223ENST00000522665 MAP3K19Q56UN5 1328 aa20.15■□□□□ 0.82
NDRG1-223ENST00000522665 FLT4P35916 1363 aa20.15■□□□□ 0.82
NDRG1-223ENST00000522665 PHRF1Q9P1Y6 1649 aaKnown RBP20.15■□□□□ 0.82
NDRG1-223ENST00000522665 FBLN1P23142 703 aa20.14■□□□□ 0.81
NDRG1-223ENST00000522665 PEAK1Q9H792 1746 aa20.13■□□□□ 0.81
NDRG1-223ENST00000522665 DIAPH1O60610 1272 aaKnown RBP20.13■□□□□ 0.81
NDRG1-223ENST00000522665 GCP02774 474 aa20.13■□□□□ 0.81
NDRG1-223ENST00000522665 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
NDRG1-223ENST00000522665 BLMP54132 1417 aaPredicted RBP20.12■□□□□ 0.81
NDRG1-223ENST00000522665 PHLPP1O60346 1717 aa20.12■□□□□ 0.81
NDRG1-223ENST00000522665 LTN1O94822 1766 aa20.11■□□□□ 0.81
NDRG1-223ENST00000522665 AMPHP49418 695 aa20.11■□□□□ 0.81
NDRG1-223ENST00000522665 PIP4K2BP78356 416 aa20.11■□□□□ 0.81
NDRG1-223ENST00000522665 LRRC59Q96AG4 307 aaKnown RBP20.1■□□□□ 0.81
NDRG1-223ENST00000522665 ABCC6O95255 1503 aa20.09■□□□□ 0.81
NDRG1-223ENST00000522665 ADAMTS8Q9UP79 889 aa20.09■□□□□ 0.81
NDRG1-223ENST00000522665 COL16A1Q07092 1604 aaPredicted RBP20.09■□□□□ 0.81
NDRG1-223ENST00000522665 FBXO41Q8TF61 875 aa20.08■□□□□ 0.81
NDRG1-223ENST00000522665 ABCA3Q99758 1704 aa20.07■□□□□ 0.8
NDRG1-223ENST00000522665 COL22A1Q8NFW1 1626 aaPredicted RBP20.07■□□□□ 0.8
NDRG1-223ENST00000522665 HNRNPUQ00839 825 aaKnown RBP eCLIP20.07■□□□□ 0.8
NDRG1-223ENST00000522665 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
NDRG1-223ENST00000522665 U2AF1L5P0DN76 240 aaPredicted RBP20.06■□□□□ 0.8
NDRG1-223ENST00000522665 HOXC9P31274 260 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms