RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 BRWD3Q6RI45 1802 aa31.14■■■□□ 2.58
HOXA3-205ENST00000522456 TIMELESSQ9UNS1 1208 aa31.13■■■□□ 2.57
HOXA3-205ENST00000522456 PRR36Q9H6K5 1346 aa31.13■■■□□ 2.57
HOXA3-205ENST00000522456 CENPJQ9HC77 1338 aaPredicted RBP31.13■■■□□ 2.57
HOXA3-205ENST00000522456 GPRASP1Q5JY77 1395 aa31.13■■■□□ 2.57
HOXA3-205ENST00000522456 BLMP54132 1417 aaPredicted RBP31.13■■■□□ 2.57
HOXA3-205ENST00000522456 ALS2Q96Q42 1657 aa31.13■■■□□ 2.57
HOXA3-205ENST00000522456 SEPT12Q8IYM1 358 aa31.12■■■□□ 2.57
HOXA3-205ENST00000522456 CCDC9Q9Y3X0 531 aaKnown RBP31.12■■■□□ 2.57
HOXA3-205ENST00000522456 CARD11Q9BXL7 1154 aa31.11■■■□□ 2.57
HOXA3-205ENST00000522456 FAM83GA6ND36 823 aa31.09■■■□□ 2.57
HOXA3-205ENST00000522456 ITSN1Q15811 1721 aa31.08■■■□□ 2.57
HOXA3-205ENST00000522456 NRAPQ86VF7 1730 aa31.08■■■□□ 2.57
HOXA3-205ENST00000522456 ONECUT3O60422 494 aaPredicted RBP31.06■■■□□ 2.56
HOXA3-205ENST00000522456 CDK19Q9BWU1 502 aa31.06■■■□□ 2.56
HOXA3-205ENST00000522456 ATP7BP35670 1465 aa31.05■■■□□ 2.56
HOXA3-205ENST00000522456 COL14A1Q05707 1796 aaKnown RBP31.05■■■□□ 2.56
HOXA3-205ENST00000522456 NGDNQ8NEJ9 315 aaKnown RBP31.03■■■□□ 2.56
HOXA3-205ENST00000522456 QRICH2Q9H0J4 1663 aa31.03■■■□□ 2.56
HOXA3-205ENST00000522456 CRYBG1Q9Y4K1 1723 aa31.02■■■□□ 2.56
HOXA3-205ENST00000522456 KRT27Q7Z3Y8 459 aa31.02■■■□□ 2.56
HOXA3-205ENST00000522456 BTG4Q9NY30 223 aa31.01■■■□□ 2.55
HOXA3-205ENST00000522456 SF3B2Q13435 895 aaKnown RBP31■■■□□ 2.55
HOXA3-205ENST00000522456 NUDT16Q96DE0 195 aaKnown RBP31■■■□□ 2.55
HOXA3-205ENST00000522456 A0A0G2JS52 829 aa30.99■■■□□ 2.55
HOXA3-205ENST00000522456 PAK3O75914 559 aaPredicted RBP30.99■■■□□ 2.55
HOXA3-205ENST00000522456 MYT1Q01538 1121 aa30.99■■■□□ 2.55
HOXA3-205ENST00000522456 SRPK2P78362 688 aaKnown RBP30.98■■■□□ 2.55
HOXA3-205ENST00000522456 DEFB132Q7Z7B7 95 aa30.98■■■□□ 2.55
HOXA3-205ENST00000522456 TOPAZ1Q8N9V7 1692 aa30.97■■■□□ 2.55
HOXA3-205ENST00000522456 FAM98CQ17RN3 349 aaKnown RBP30.96■■■□□ 2.55
HOXA3-205ENST00000522456 CCDC61Q9Y6R9 512 aa30.94■■■□□ 2.54
HOXA3-205ENST00000522456 CABP2Q9NPB3 220 aa30.93■■■□□ 2.54
HOXA3-205ENST00000522456 EVC2Q86UK5 1308 aa30.93■■■□□ 2.54
HOXA3-205ENST00000522456 PRDM11Q9NQV5 511 aa30.92■■■□□ 2.54
HOXA3-205ENST00000522456 SPATA31A5Q5VU36 1347 aa30.9■■■□□ 2.54
HOXA3-205ENST00000522456 SPATA31A7Q8IWB4 1347 aa30.9■■■□□ 2.54
HOXA3-205ENST00000522456 PHRF1Q9P1Y6 1649 aaKnown RBP30.9■■■□□ 2.54
HOXA3-205ENST00000522456 POLR3AO14802 1390 aaPredicted RBP30.88■■■□□ 2.53
HOXA3-205ENST00000522456 PLEKHG3A1L390 1219 aa30.86■■■□□ 2.53
HOXA3-205ENST00000522456 KIAA0232Q92628 1395 aa30.86■■■□□ 2.53
HOXA3-205ENST00000522456 THSD7AQ9UPZ6 1657 aa30.86■■■□□ 2.53
HOXA3-205ENST00000522456 PPIP5K1Q6PFW1 1433 aa30.84■■■□□ 2.53
HOXA3-205ENST00000522456 BAG6P46379 1132 aa30.84■■■□□ 2.53
HOXA3-205ENST00000522456 SBNO2Q9Y2G9 1366 aa30.83■■■□□ 2.53
HOXA3-205ENST00000522456 ACEP12821 1306 aa30.83■■■□□ 2.53
HOXA3-205ENST00000522456 ST20-MTHFSA0A0A6YYL1 179 aa30.83■■■□□ 2.53
HOXA3-205ENST00000522456 CHRNA2Q15822 529 aa30.81■■■□□ 2.52
HOXA3-205ENST00000522456 RGPD1P0DJD0 1748 aa30.81■■■□□ 2.52
HOXA3-205ENST00000522456 NUTM2GQ5VZR2 741 aa30.8■■■□□ 2.52
HOXA3-205ENST00000522456 CABP1Q9NZU7 370 aa30.79■■■□□ 2.52
HOXA3-205ENST00000522456 USP47Q96K76 1375 aa30.79■■■□□ 2.52
HOXA3-205ENST00000522456 SPATA31A1Q5TZJ5 1347 aa30.78■■■□□ 2.52
HOXA3-205ENST00000522456 ZC3H6P61129 1189 aaKnown RBP30.78■■■□□ 2.52
HOXA3-205ENST00000522456 FAM182BQ5T319 152 aa30.78■■■□□ 2.52
HOXA3-205ENST00000522456 NRKQ7Z2Y5 1582 aa30.77■■■□□ 2.52
HOXA3-205ENST00000522456 STRN4Q9NRL3 753 aa30.77■■■□□ 2.52
HOXA3-205ENST00000522456 SLC24A1O60721 1099 aa30.75■■■□□ 2.51
HOXA3-205ENST00000522456 BRD4O60885 1362 aaPredicted RBP30.75■■■□□ 2.51
HOXA3-205ENST00000522456 TESK2Q96S53 571 aa30.74■■■□□ 2.51
HOXA3-205ENST00000522456 LRP5O75197 1615 aa30.73■■■□□ 2.51
HOXA3-205ENST00000522456 ABTB2Q8N961 1025 aa30.73■■■□□ 2.51
HOXA3-205ENST00000522456 TNS1Q9HBL0 1735 aaKnown RBP30.73■■■□□ 2.51
HOXA3-205ENST00000522456 SSH2Q76I76 1423 aa30.72■■■□□ 2.51
HOXA3-205ENST00000522456 EN1Q05925 392 aaPredicted RBP30.71■■■□□ 2.51
HOXA3-205ENST00000522456 DISP2A7MBM2 1401 aa30.71■■■□□ 2.51
HOXA3-205ENST00000522456 USP19O94966 1318 aa30.7■■■□□ 2.5
HOXA3-205ENST00000522456 CPDO75976 1380 aa30.69■■■□□ 2.5
HOXA3-205ENST00000522456 PSDA5PKW4 1024 aaPredicted RBP30.69■■■□□ 2.5
HOXA3-205ENST00000522456 LMO7Q8WWI1 1683 aa30.68■■■□□ 2.5
HOXA3-205ENST00000522456 USP6P35125 1406 aa30.68■■■□□ 2.5
HOXA3-205ENST00000522456 EVA1CP58658 441 aa30.68■■■□□ 2.5
HOXA3-205ENST00000522456 CAMTA1Q9Y6Y1 1673 aa30.68■■■□□ 2.5
HOXA3-205ENST00000522456 USP35Q9P2H5 1018 aa30.67■■■□□ 2.5
HOXA3-205ENST00000522456 TMC1Q8TDI8 760 aa30.66■■■□□ 2.5
HOXA3-205ENST00000522456 TMF1P82094 1093 aa30.65■■■□□ 2.5
HOXA3-205ENST00000522456 FAM196AQ6ZSG2 479 aa30.65■■■□□ 2.5
HOXA3-205ENST00000522456 PUS7Q96PZ0 661 aaKnown RBP30.65■■■□□ 2.5
HOXA3-205ENST00000522456 BARGINQ6ZT62 677 aa30.64■■■□□ 2.5
HOXA3-205ENST00000522456 NLRP13Q86W25 1043 aa30.64■■■□□ 2.5
HOXA3-205ENST00000522456 ZNF692Q9BU19 519 aaPredicted RBP30.63■■■□□ 2.49
HOXA3-205ENST00000522456 LARP1Q6PKG0 1096 aaKnown RBP30.62■■■□□ 2.49
HOXA3-205ENST00000522456 TRIM37O94972 964 aa30.61■■■□□ 2.49
HOXA3-205ENST00000522456 GCP02774 474 aa30.61■■■□□ 2.49
HOXA3-205ENST00000522456 EIF4G2P78344 907 aaKnown RBP eCLIP30.61■■■□□ 2.49
HOXA3-205ENST00000522456 AKAP12Q02952 1782 aa30.61■■■□□ 2.49
HOXA3-205ENST00000522456 TCP11L2Q8N4U5 519 aa30.59■■■□□ 2.49
HOXA3-205ENST00000522456 SLC12A5Q9H2X9 1139 aa30.59■■■□□ 2.49
HOXA3-205ENST00000522456 PDE3BQ13370 1112 aa30.58■■■□□ 2.49
HOXA3-205ENST00000522456 EZH2Q15910 746 aaKnown RBP30.58■■■□□ 2.49
HOXA3-205ENST00000522456 COL5A2P05997 1499 aaPredicted RBP30.57■■■□□ 2.48
HOXA3-205ENST00000522456 CPSF1Q10570 1443 aaKnown RBP30.56■■■□□ 2.48
HOXA3-205ENST00000522456 R3HDM1Q15032 1099 aaKnown RBP30.56■■■□□ 2.48
HOXA3-205ENST00000522456 CDCA8Q53HL2 280 aa30.56■■■□□ 2.48
HOXA3-205ENST00000522456 KTN1Q86UP2 1357 aaKnown RBP30.55■■■□□ 2.48
HOXA3-205ENST00000522456 HSPA5P11021 654 aaKnown RBP30.55■■■□□ 2.48
HOXA3-205ENST00000522456 HDGFL2Q7Z4V5 671 aaPredicted RBP30.55■■■□□ 2.48
HOXA3-205ENST00000522456 CAMKK2Q96RR4 588 aa30.55■■■□□ 2.48
HOXA3-205ENST00000522456 THRAP3Q9Y2W1 955 aaKnown RBP30.55■■■□□ 2.48
HOXA3-205ENST00000522456 PARD3Q8TEW0 1356 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms