RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 AATKQ6ZMQ8 1374 aa12.8□□□□□ -0.36
SPARC-205ENST00000522348 APAF1O14727 1248 aa12.79□□□□□ -0.36
SPARC-205ENST00000522348 DIAPH1O60610 1272 aaKnown RBP12.79□□□□□ -0.36
SPARC-205ENST00000522348 PROSER2Q86WR7 435 aaPredicted RBP12.79□□□□□ -0.36
SPARC-205ENST00000522348 PMFBP1Q8TBY8 1022 aa12.79□□□□□ -0.36
SPARC-205ENST00000522348 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
SPARC-205ENST00000522348 PNPLA6Q8IY17 1366 aa12.79□□□□□ -0.36
SPARC-205ENST00000522348 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
SPARC-205ENST00000522348 U2AF1L5P0DN76 240 aaPredicted RBP12.78□□□□□ -0.36
SPARC-205ENST00000522348 U2AF1Q01081 240 aaKnown RBP eCLIP12.78□□□□□ -0.36
SPARC-205ENST00000522348 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
SPARC-205ENST00000522348 CCDC146Q8IYE0 955 aa12.78□□□□□ -0.36
SPARC-205ENST00000522348 CHD2O14647 1828 aaKnown RBP12.78□□□□□ -0.36
SPARC-205ENST00000522348 C14orf37Q86TY3 774 aa12.77□□□□□ -0.37
SPARC-205ENST00000522348 ZNF335Q9H4Z2 1342 aaPredicted RBP12.77□□□□□ -0.37
SPARC-205ENST00000522348 USP6P35125 1406 aa12.77□□□□□ -0.37
SPARC-205ENST00000522348 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
SPARC-205ENST00000522348 SSH2Q76I76 1423 aa12.75□□□□□ -0.37
SPARC-205ENST00000522348 CERKQ8TCT0 537 aa12.75□□□□□ -0.37
SPARC-205ENST00000522348 ZNF521Q96K83 1311 aa12.75□□□□□ -0.37
SPARC-205ENST00000522348 C19orf44Q9H6X5 657 aa12.75□□□□□ -0.37
SPARC-205ENST00000522348 ZRANB1Q9UGI0 708 aa12.75□□□□□ -0.37
SPARC-205ENST00000522348 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
SPARC-205ENST00000522348 ANKRD26Q9UPS8 1709 aa12.75□□□□□ -0.37
SPARC-205ENST00000522348 ADGRL3Q9HAR2 1447 aa12.74□□□□□ -0.37
SPARC-205ENST00000522348 PPM1GO15355 546 aaPredicted RBP12.74□□□□□ -0.37
SPARC-205ENST00000522348 FCHSD2O94868 740 aa12.74□□□□□ -0.37
SPARC-205ENST00000522348 CCDC27Q2M243 656 aa12.74□□□□□ -0.37
SPARC-205ENST00000522348 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
SPARC-205ENST00000522348 CDCA7LQ96GN5 454 aa12.74□□□□□ -0.37
SPARC-205ENST00000522348 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
SPARC-205ENST00000522348 TOPAZ1Q8N9V7 1692 aa12.73□□□□□ -0.37
SPARC-205ENST00000522348 USP31Q70CQ4 1352 aa12.73□□□□□ -0.37
SPARC-205ENST00000522348 RNF123Q5XPI4 1314 aa12.73□□□□□ -0.37
SPARC-205ENST00000522348 SLFN5Q08AF3 891 aa12.73□□□□□ -0.37
SPARC-205ENST00000522348 AKAP12Q02952 1782 aa12.73□□□□□ -0.37
SPARC-205ENST00000522348 MON2Q7Z3U7 1717 aa12.73□□□□□ -0.37
SPARC-205ENST00000522348 NCOA3Q9Y6Q9 1424 aa12.72□□□□□ -0.37
SPARC-205ENST00000522348 E9PSI1 815 aa12.72□□□□□ -0.37
SPARC-205ENST00000522348 NEFMP07197 916 aa12.72□□□□□ -0.37
SPARC-205ENST00000522348 FBLN1P23142 703 aa12.72□□□□□ -0.37
SPARC-205ENST00000522348 ESCO1Q5FWF5 840 aa12.72□□□□□ -0.37
SPARC-205ENST00000522348 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
SPARC-205ENST00000522348 TRMT2AQ8IZ69 625 aaKnown RBP12.72□□□□□ -0.37
SPARC-205ENST00000522348 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
SPARC-205ENST00000522348 RCAN3Q9UKA8 241 aa12.72□□□□□ -0.37
SPARC-205ENST00000522348 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
SPARC-205ENST00000522348 ITSN1Q15811 1721 aa12.71□□□□□ -0.37
SPARC-205ENST00000522348 PSME1Q06323 249 aa12.71□□□□□ -0.37
SPARC-205ENST00000522348 WWC1Q8IX03 1113 aa12.71□□□□□ -0.37
SPARC-205ENST00000522348 PLEKHF1Q96S99 279 aa12.71□□□□□ -0.37
SPARC-205ENST00000522348 EMILIN1Q9Y6C2 1016 aa12.71□□□□□ -0.37
SPARC-205ENST00000522348 COL3A1P02461 1466 aaPredicted RBP12.71□□□□□ -0.38
SPARC-205ENST00000522348 NWD1Q149M9 1564 aa12.7□□□□□ -0.38
SPARC-205ENST00000522348 IL13P35225 146 aa12.7□□□□□ -0.38
SPARC-205ENST00000522348 NLRP6P59044 892 aa12.7□□□□□ -0.38
SPARC-205ENST00000522348 DUSP27Q5VZP5 1158 aa12.7□□□□□ -0.38
SPARC-205ENST00000522348 PHF23Q9BUL5 403 aaPredicted RBP12.7□□□□□ -0.38
SPARC-205ENST00000522348 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
SPARC-205ENST00000522348 MAPK8IP3Q9UPT6 1336 aa12.69□□□□□ -0.38
SPARC-205ENST00000522348 ATF3P18847 181 aa12.69□□□□□ -0.38
SPARC-205ENST00000522348 RRS1Q15050 365 aaKnown RBP12.69□□□□□ -0.38
SPARC-205ENST00000522348 ABTB2Q8N961 1025 aa12.69□□□□□ -0.38
SPARC-205ENST00000522348 SHPRHQ149N8 1683 aa12.69□□□□□ -0.38
SPARC-205ENST00000522348 OVOS2A0A0J9YW53 1432 aa12.69□□□□□ -0.38
SPARC-205ENST00000522348 OVOS2Q6IE36 1432 aa12.69□□□□□ -0.38
SPARC-205ENST00000522348 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
SPARC-205ENST00000522348 NEUROD2Q15784 382 aa12.68□□□□□ -0.38
SPARC-205ENST00000522348 PELP1Q8IZL8 1130 aaKnown RBP12.68□□□□□ -0.38
SPARC-205ENST00000522348 CDK12Q9NYV4 1490 aaPredicted RBP12.67□□□□□ -0.38
SPARC-205ENST00000522348 TMPOP42166 694 aaKnown RBP12.67□□□□□ -0.38
SPARC-205ENST00000522348 PPP4R2Q9NY27 417 aa12.67□□□□□ -0.38
SPARC-205ENST00000522348 LTBP4Q8N2S1 1624 aa12.66□□□□□ -0.38
SPARC-205ENST00000522348 FBXO41Q8TF61 875 aa12.66□□□□□ -0.38
SPARC-205ENST00000522348 RSPH6AQ9H0K4 717 aa12.66□□□□□ -0.38
SPARC-205ENST00000522348 RRP7AQ9Y3A4 280 aaKnown RBP12.66□□□□□ -0.38
SPARC-205ENST00000522348 NRKQ7Z2Y5 1582 aa12.65□□□□□ -0.38
SPARC-205ENST00000522348 AMPHP49418 695 aa12.65□□□□□ -0.38
SPARC-205ENST00000522348 RRP1P56182 461 aaKnown RBP12.65□□□□□ -0.38
SPARC-205ENST00000522348 RIPK4P57078 832 aa12.65□□□□□ -0.38
SPARC-205ENST00000522348 IRX6P78412 446 aaPredicted RBP12.65□□□□□ -0.38
SPARC-205ENST00000522348 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
SPARC-205ENST00000522348 ORAI2Q96SN7 254 aa12.65□□□□□ -0.38
SPARC-205ENST00000522348 MYH16Q9H6N6 1097 aa12.65□□□□□ -0.38
SPARC-205ENST00000522348 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
SPARC-205ENST00000522348 KIF24Q5T7B8 1368 aa12.65□□□□□ -0.38
SPARC-205ENST00000522348 NALCNQ8IZF0 1738 aa12.65□□□□□ -0.38
SPARC-205ENST00000522348 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
SPARC-205ENST00000522348 PRKAR2BP31323 418 aa12.64□□□□□ -0.39
SPARC-205ENST00000522348 KCNH5Q8NCM2 988 aa12.64□□□□□ -0.39
SPARC-205ENST00000522348 IL16Q14005 1332 aa12.63□□□□□ -0.39
SPARC-205ENST00000522348 MAP3K19Q56UN5 1328 aa12.63□□□□□ -0.39
SPARC-205ENST00000522348 DCCP43146 1447 aa12.63□□□□□ -0.39
SPARC-205ENST00000522348 MAP2P11137 1827 aaKnown RBP12.63□□□□□ -0.39
SPARC-205ENST00000522348 FOXO3O43524 673 aa12.63□□□□□ -0.39
SPARC-205ENST00000522348 EIF4A2Q14240 407 aaKnown RBP12.63□□□□□ -0.39
SPARC-205ENST00000522348 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
SPARC-205ENST00000522348 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.63□□□□□ -0.39
SPARC-205ENST00000522348 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
SPARC-205ENST00000522348 SBNO1A3KN83 1393 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms