RNA–Protein interactions for RNA: ENST00000522196.1

VIRMA-206, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 2

Gene VIRMA, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-206ENST00000522196 FAM83GA6ND36 823 aa18.67■□□□□ 0.58
VIRMA-206ENST00000522196 PPIP5K1Q6PFW1 1433 aa18.66■□□□□ 0.58
VIRMA-206ENST00000522196 ABTB2Q8N961 1025 aa18.66■□□□□ 0.58
VIRMA-206ENST00000522196 TRPM1Q7Z4N2 1603 aa18.65■□□□□ 0.58
VIRMA-206ENST00000522196 A0A0G2JS52 829 aa18.65■□□□□ 0.58
VIRMA-206ENST00000522196 MYT1Q01538 1121 aa18.65■□□□□ 0.58
VIRMA-206ENST00000522196 PRDM11Q9NQV5 511 aa18.65■□□□□ 0.58
VIRMA-206ENST00000522196 CABP1Q9NZU7 370 aa18.65■□□□□ 0.58
VIRMA-206ENST00000522196 QRICH2Q9H0J4 1663 aa18.64■□□□□ 0.57
VIRMA-206ENST00000522196 BTG4Q9NY30 223 aa18.64■□□□□ 0.57
VIRMA-206ENST00000522196 POLR3AO14802 1390 aaPredicted RBP18.64■□□□□ 0.57
VIRMA-206ENST00000522196 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
VIRMA-206ENST00000522196 SLIT2O94813 1529 aa18.64■□□□□ 0.57
VIRMA-206ENST00000522196 VPS72Q15906 364 aa18.63■□□□□ 0.57
VIRMA-206ENST00000522196 PCGF6Q9BYE7 350 aa18.63■□□□□ 0.57
VIRMA-206ENST00000522196 TRPM3Q9HCF6 1732 aaPredicted RBP18.63■□□□□ 0.57
VIRMA-206ENST00000522196 ZC3H6P61129 1189 aaKnown RBP18.61■□□□□ 0.57
VIRMA-206ENST00000522196 NLRP13Q86W25 1043 aa18.61■□□□□ 0.57
VIRMA-206ENST00000522196 ALS2Q96Q42 1657 aa18.6■□□□□ 0.57
VIRMA-206ENST00000522196 RALGAPBQ86X10 1494 aa18.6■□□□□ 0.57
VIRMA-206ENST00000522196 EVA1CP58658 441 aa18.58■□□□□ 0.56
VIRMA-206ENST00000522196 CHRNA2Q15822 529 aa18.58■□□□□ 0.56
VIRMA-206ENST00000522196 SEPT12Q8IYM1 358 aa18.58■□□□□ 0.56
VIRMA-206ENST00000522196 ZNF692Q9BU19 519 aaPredicted RBP18.58■□□□□ 0.56
VIRMA-206ENST00000522196 KIAA0232Q92628 1395 aa18.57■□□□□ 0.56
VIRMA-206ENST00000522196 TOPAZ1Q8N9V7 1692 aa18.57■□□□□ 0.56
VIRMA-206ENST00000522196 ZBTB7CA1YPR0 619 aa18.57■□□□□ 0.56
VIRMA-206ENST00000522196 NLRP6P59044 892 aa18.57■□□□□ 0.56
VIRMA-206ENST00000522196 STRN4Q9NRL3 753 aa18.57■□□□□ 0.56
VIRMA-206ENST00000522196 ABCA3Q99758 1704 aa18.57■□□□□ 0.56
VIRMA-206ENST00000522196 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.57■□□□□ 0.56
VIRMA-206ENST00000522196 BRD4O60885 1362 aaPredicted RBP18.56■□□□□ 0.56
VIRMA-206ENST00000522196 PLCH1Q4KWH8 1693 aa18.56■□□□□ 0.56
VIRMA-206ENST00000522196 NWD2Q9ULI1 1742 aa18.55■□□□□ 0.56
VIRMA-206ENST00000522196 FAM98CQ17RN3 349 aaKnown RBP18.55■□□□□ 0.56
VIRMA-206ENST00000522196 TMC1Q8TDI8 760 aa18.55■□□□□ 0.56
VIRMA-206ENST00000522196 COL14A1Q05707 1796 aaKnown RBP18.54■□□□□ 0.56
VIRMA-206ENST00000522196 GCP02774 474 aa18.53■□□□□ 0.56
VIRMA-206ENST00000522196 USP6P35125 1406 aa18.53■□□□□ 0.56
VIRMA-206ENST00000522196 SLC24A1O60721 1099 aa18.52■□□□□ 0.56
VIRMA-206ENST00000522196 SF3B2Q13435 895 aaKnown RBP18.52■□□□□ 0.56
VIRMA-206ENST00000522196 CCDC125Q86Z20 511 aa18.52■□□□□ 0.56
VIRMA-206ENST00000522196 GLI3P10071 1580 aa18.51■□□□□ 0.55
VIRMA-206ENST00000522196 KRT27Q7Z3Y8 459 aa18.51■□□□□ 0.55
VIRMA-206ENST00000522196 ONECUT3O60422 494 aaPredicted RBP18.5■□□□□ 0.55
VIRMA-206ENST00000522196 HDGFL2Q7Z4V5 671 aaPredicted RBP18.5■□□□□ 0.55
VIRMA-206ENST00000522196 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
VIRMA-206ENST00000522196 KTN1Q86UP2 1357 aaKnown RBP18.5■□□□□ 0.55
VIRMA-206ENST00000522196 SBNO2Q9Y2G9 1366 aa18.5■□□□□ 0.55
VIRMA-206ENST00000522196 USP19O94966 1318 aa18.49■□□□□ 0.55
VIRMA-206ENST00000522196 SPATA31A5Q5VU36 1347 aa18.49■□□□□ 0.55
VIRMA-206ENST00000522196 SPATA31A7Q8IWB4 1347 aa18.49■□□□□ 0.55
VIRMA-206ENST00000522196 TTC21BQ7Z4L5 1316 aa18.49■□□□□ 0.55
VIRMA-206ENST00000522196 ST20-MTHFSA0A0A6YYL1 179 aa18.48■□□□□ 0.55
VIRMA-206ENST00000522196 SOX12O15370 315 aa18.48■□□□□ 0.55
VIRMA-206ENST00000522196 TTC21AQ8NDW8 1320 aa18.48■□□□□ 0.55
VIRMA-206ENST00000522196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.47■□□□□ 0.55
VIRMA-206ENST00000522196 CCER1Q8TC90 406 aaPredicted RBP18.47■□□□□ 0.55
VIRMA-206ENST00000522196 TERF2IPQ9NYB0 399 aa18.47■□□□□ 0.55
VIRMA-206ENST00000522196 PHRF1Q9P1Y6 1649 aaKnown RBP18.47■□□□□ 0.55
VIRMA-206ENST00000522196 CPDO75976 1380 aa18.46■□□□□ 0.55
VIRMA-206ENST00000522196 KCNH5Q8NCM2 988 aa18.46■□□□□ 0.55
VIRMA-206ENST00000522196 TIMELESSQ9UNS1 1208 aa18.46■□□□□ 0.55
VIRMA-206ENST00000522196 CRYBG1Q9Y4K1 1723 aa18.46■□□□□ 0.55
VIRMA-206ENST00000522196 SLC12A5Q9H2X9 1139 aa18.45■□□□□ 0.54
VIRMA-206ENST00000522196 SPATA31A1Q5TZJ5 1347 aa18.45■□□□□ 0.54
VIRMA-206ENST00000522196 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
VIRMA-206ENST00000522196 NRAPQ86VF7 1730 aa18.44■□□□□ 0.54
VIRMA-206ENST00000522196 LARP1Q6PKG0 1096 aaKnown RBP18.43■□□□□ 0.54
VIRMA-206ENST00000522196 PUS7Q96PZ0 661 aaKnown RBP18.43■□□□□ 0.54
VIRMA-206ENST00000522196 NRKQ7Z2Y5 1582 aa18.42■□□□□ 0.54
VIRMA-206ENST00000522196 TMF1P82094 1093 aa18.42■□□□□ 0.54
VIRMA-206ENST00000522196 BLMP54132 1417 aaPredicted RBP18.41■□□□□ 0.54
VIRMA-206ENST00000522196 CPSF1Q10570 1443 aaKnown RBP18.41■□□□□ 0.54
VIRMA-206ENST00000522196 SSH2Q76I76 1423 aa18.41■□□□□ 0.54
VIRMA-206ENST00000522196 PDE3BQ13370 1112 aa18.41■□□□□ 0.54
VIRMA-206ENST00000522196 TCP11L2Q8N4U5 519 aa18.41■□□□□ 0.54
VIRMA-206ENST00000522196 CSB-PGBD3P0DP91 1061 aa18.4■□□□□ 0.54
VIRMA-206ENST00000522196 ZRANB1Q9UGI0 708 aa18.4■□□□□ 0.54
VIRMA-206ENST00000522196 USP47Q96K76 1375 aa18.4■□□□□ 0.54
VIRMA-206ENST00000522196 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.54
VIRMA-206ENST00000522196 CAMTA1Q9Y6Y1 1673 aa18.39■□□□□ 0.53
VIRMA-206ENST00000522196 CDCA8Q53HL2 280 aa18.39■□□□□ 0.53
VIRMA-206ENST00000522196 FAM182BQ5T319 152 aa18.39■□□□□ 0.53
VIRMA-206ENST00000522196 TOM1L2Q6ZVM7 507 aa18.39■□□□□ 0.53
VIRMA-206ENST00000522196 TESK2Q96S53 571 aa18.39■□□□□ 0.53
VIRMA-206ENST00000522196 AATKQ6ZMQ8 1374 aa18.39■□□□□ 0.53
VIRMA-206ENST00000522196 BARGINQ6ZT62 677 aa18.38■□□□□ 0.53
VIRMA-206ENST00000522196 NME9Q86XW9 330 aa18.38■□□□□ 0.53
VIRMA-206ENST00000522196 THRAP3Q9Y2W1 955 aaKnown RBP18.38■□□□□ 0.53
VIRMA-206ENST00000522196 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
VIRMA-206ENST00000522196 BAG6P46379 1132 aa18.37■□□□□ 0.53
VIRMA-206ENST00000522196 PIK3C2AO00443 1686 aa18.37■□□□□ 0.53
VIRMA-206ENST00000522196 DEFB132Q7Z7B7 95 aa18.36■□□□□ 0.53
VIRMA-206ENST00000522196 ARHGEF25Q86VW2 580 aa18.36■□□□□ 0.53
VIRMA-206ENST00000522196 NINLQ9Y2I6 1382 aa18.36■□□□□ 0.53
VIRMA-206ENST00000522196 EP400Q96L91 3159 aa18.36■□□□□ 0.53
VIRMA-206ENST00000522196 SLIT3O75094 1523 aa18.35■□□□□ 0.53
VIRMA-206ENST00000522196 EDC4Q6P2E9 1401 aaKnown RBP18.35■□□□□ 0.53
VIRMA-206ENST00000522196 FAM196AQ6ZSG2 479 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms