RNA–Protein interactions for RNA: ENST00000522107.1

IGHV3-50-201, Transcript of immunoglobulin heavy variable 3-50 (pseudogene), humanhuman

BASIC

Gene IGHV3-50, Length 317 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-50-201ENST00000522107 USP47Q96K76 1375 aa13.37□□□□□ -0.27
IGHV3-50-201ENST00000522107 NUTM2GQ5VZR2 741 aa13.37□□□□□ -0.27
IGHV3-50-201ENST00000522107 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
IGHV3-50-201ENST00000522107 CPSF1Q10570 1443 aaKnown RBP13.37□□□□□ -0.27
IGHV3-50-201ENST00000522107 ARHGEF10O15013 1369 aa13.36□□□□□ -0.27
IGHV3-50-201ENST00000522107 SLIT2O94813 1529 aa13.36□□□□□ -0.27
IGHV3-50-201ENST00000522107 FAM83GA6ND36 823 aa13.36□□□□□ -0.27
IGHV3-50-201ENST00000522107 USP6P35125 1406 aa13.36□□□□□ -0.27
IGHV3-50-201ENST00000522107 SOCS7O14512 581 aa13.35□□□□□ -0.27
IGHV3-50-201ENST00000522107 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
IGHV3-50-201ENST00000522107 NGLY1Q96IV0 654 aa13.35□□□□□ -0.27
IGHV3-50-201ENST00000522107 ATRNO75882 1429 aa13.35□□□□□ -0.27
IGHV3-50-201ENST00000522107 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
IGHV3-50-201ENST00000522107 NRKQ7Z2Y5 1582 aa13.34□□□□□ -0.27
IGHV3-50-201ENST00000522107 ZNF772Q68DY9 489 aaPredicted RBP13.34□□□□□ -0.27
IGHV3-50-201ENST00000522107 SLC12A5Q9H2X9 1139 aa13.34□□□□□ -0.27
IGHV3-50-201ENST00000522107 PIK3C2AO00443 1686 aa13.34□□□□□ -0.27
IGHV3-50-201ENST00000522107 PHRF1Q9P1Y6 1649 aaKnown RBP13.33□□□□□ -0.28
IGHV3-50-201ENST00000522107 QTRT2Q9H974 415 aaKnown RBP13.33□□□□□ -0.28
IGHV3-50-201ENST00000522107 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
IGHV3-50-201ENST00000522107 USP21Q9UK80 565 aa13.33□□□□□ -0.28
IGHV3-50-201ENST00000522107 USP19O94966 1318 aa13.33□□□□□ -0.28
IGHV3-50-201ENST00000522107 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
IGHV3-50-201ENST00000522107 RGS12O14924 1447 aa13.31□□□□□ -0.28
IGHV3-50-201ENST00000522107 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
IGHV3-50-201ENST00000522107 PLCH1Q4KWH8 1693 aa13.31□□□□□ -0.28
IGHV3-50-201ENST00000522107 NRAPQ86VF7 1730 aa13.3□□□□□ -0.28
IGHV3-50-201ENST00000522107 GLI3P10071 1580 aa13.3□□□□□ -0.28
IGHV3-50-201ENST00000522107 ABTB2Q8N961 1025 aa13.3□□□□□ -0.28
IGHV3-50-201ENST00000522107 A0A1W2PP64 1363 aa13.3□□□□□ -0.28
IGHV3-50-201ENST00000522107 KIAA0232Q92628 1395 aa13.3□□□□□ -0.28
IGHV3-50-201ENST00000522107 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
IGHV3-50-201ENST00000522107 RXRBP28702 533 aa13.29□□□□□ -0.28
IGHV3-50-201ENST00000522107 CHRNA2Q15822 529 aa13.29□□□□□ -0.28
IGHV3-50-201ENST00000522107 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
IGHV3-50-201ENST00000522107 PUS7Q96PZ0 661 aaKnown RBP13.29□□□□□ -0.28
IGHV3-50-201ENST00000522107 SLIT3O75094 1523 aa13.29□□□□□ -0.28
IGHV3-50-201ENST00000522107 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.28□□□□□ -0.28
IGHV3-50-201ENST00000522107 EP400Q96L91 3159 aa13.28□□□□□ -0.28
IGHV3-50-201ENST00000522107 C11orf95C9JLR9 678 aaPredicted RBP13.28□□□□□ -0.28
IGHV3-50-201ENST00000522107 ZC3H6P61129 1189 aaKnown RBP13.28□□□□□ -0.28
IGHV3-50-201ENST00000522107 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.29
IGHV3-50-201ENST00000522107 RBM6P78332 1123 aaKnown RBP13.27□□□□□ -0.29
IGHV3-50-201ENST00000522107 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
IGHV3-50-201ENST00000522107 TRPC5Q9UL62 973 aaPredicted RBP13.27□□□□□ -0.29
IGHV3-50-201ENST00000522107 KTN1Q86UP2 1357 aaKnown RBP13.27□□□□□ -0.29
IGHV3-50-201ENST00000522107 BRD4O60885 1362 aaPredicted RBP13.26□□□□□ -0.29
IGHV3-50-201ENST00000522107 GCP02774 474 aa13.26□□□□□ -0.29
IGHV3-50-201ENST00000522107 COL14A1Q05707 1796 aaKnown RBP13.26□□□□□ -0.29
IGHV3-50-201ENST00000522107 NME9Q86XW9 330 aa13.26□□□□□ -0.29
IGHV3-50-201ENST00000522107 LMO7Q8WWI1 1683 aa13.26□□□□□ -0.29
IGHV3-50-201ENST00000522107 BTG4Q9NY30 223 aa13.26□□□□□ -0.29
IGHV3-50-201ENST00000522107 CDK12Q9NYV4 1490 aaPredicted RBP13.26□□□□□ -0.29
IGHV3-50-201ENST00000522107 NWD2Q9ULI1 1742 aa13.26□□□□□ -0.29
IGHV3-50-201ENST00000522107 CAMTA1Q9Y6Y1 1673 aa13.26□□□□□ -0.29
IGHV3-50-201ENST00000522107 MYOM1P52179 1685 aa13.25□□□□□ -0.29
IGHV3-50-201ENST00000522107 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
IGHV3-50-201ENST00000522107 NLRP6P59044 892 aa13.25□□□□□ -0.29
IGHV3-50-201ENST00000522107 GJD4Q96KN9 370 aaPredicted RBP13.25□□□□□ -0.29
IGHV3-50-201ENST00000522107 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
IGHV3-50-201ENST00000522107 COL18A1P39060 1754 aa13.25□□□□□ -0.29
IGHV3-50-201ENST00000522107 NFAT5O94916 1531 aa13.24□□□□□ -0.29
IGHV3-50-201ENST00000522107 CPDO75976 1380 aa13.24□□□□□ -0.29
IGHV3-50-201ENST00000522107 USP31Q70CQ4 1352 aa13.24□□□□□ -0.29
IGHV3-50-201ENST00000522107 VPS72Q15906 364 aa13.24□□□□□ -0.29
IGHV3-50-201ENST00000522107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.29
IGHV3-50-201ENST00000522107 TMF1P82094 1093 aa13.23□□□□□ -0.29
IGHV3-50-201ENST00000522107 NLRP13Q86W25 1043 aa13.23□□□□□ -0.29
IGHV3-50-201ENST00000522107 CARD14Q9BXL6 1004 aa13.23□□□□□ -0.29
IGHV3-50-201ENST00000522107 AXIN2Q9Y2T1 843 aa13.23□□□□□ -0.29
IGHV3-50-201ENST00000522107 USP54Q70EL1 1684 aa13.23□□□□□ -0.29
IGHV3-50-201ENST00000522107 TTC21AQ8NDW8 1320 aa13.22□□□□□ -0.29
IGHV3-50-201ENST00000522107 FBLN1P23142 703 aa13.22□□□□□ -0.29
IGHV3-50-201ENST00000522107 PRDM11Q9NQV5 511 aa13.22□□□□□ -0.29
IGHV3-50-201ENST00000522107 OVOS2A0A0J9YW53 1432 aa13.22□□□□□ -0.29
IGHV3-50-201ENST00000522107 OVOS2Q6IE36 1432 aa13.22□□□□□ -0.29
IGHV3-50-201ENST00000522107 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
IGHV3-50-201ENST00000522107 ANKRD36BQ8N2N9 1353 aa13.21□□□□□ -0.29
IGHV3-50-201ENST00000522107 ARHGEF25Q86VW2 580 aa13.21□□□□□ -0.29
IGHV3-50-201ENST00000522107 SOX12O15370 315 aa13.2□□□□□ -0.3
IGHV3-50-201ENST00000522107 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
IGHV3-50-201ENST00000522107 EIF4G2P78344 907 aaKnown RBP eCLIP13.2□□□□□ -0.3
IGHV3-50-201ENST00000522107 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
IGHV3-50-201ENST00000522107 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
IGHV3-50-201ENST00000522107 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
IGHV3-50-201ENST00000522107 COL5A2P05997 1499 aaPredicted RBP13.19□□□□□ -0.3
IGHV3-50-201ENST00000522107 BRWD3Q6RI45 1802 aa13.19□□□□□ -0.3
IGHV3-50-201ENST00000522107 LARP1Q6PKG0 1096 aaKnown RBP13.19□□□□□ -0.3
IGHV3-50-201ENST00000522107 HDGFL2Q7Z4V5 671 aaPredicted RBP13.19□□□□□ -0.3
IGHV3-50-201ENST00000522107 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.3
IGHV3-50-201ENST00000522107 TERF2IPQ9NYB0 399 aa13.18□□□□□ -0.3
IGHV3-50-201ENST00000522107 AATKQ6ZMQ8 1374 aa13.18□□□□□ -0.3
IGHV3-50-201ENST00000522107 FYB1O15117 783 aa13.17□□□□□ -0.3
IGHV3-50-201ENST00000522107 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
IGHV3-50-201ENST00000522107 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
IGHV3-50-201ENST00000522107 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
IGHV3-50-201ENST00000522107 SPATA31A1Q5TZJ5 1347 aa13.16□□□□□ -0.3
IGHV3-50-201ENST00000522107 THSD7AQ9UPZ6 1657 aa13.16□□□□□ -0.3
IGHV3-50-201ENST00000522107 SEPT12Q8IYM1 358 aa13.16□□□□□ -0.3
IGHV3-50-201ENST00000522107 ZBTB7CA1YPR0 619 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms