RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 HECW2Q9P2P5 1572 aa9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 E9PCH4 1651 aa9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 GPRASP1Q5JY77 1395 aa9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 CCDC7Q96M83 1385 aa9.35□□□□□ -0.91
CTNNA1-228ENST00000521640 MROH1Q8NDA8 1641 aa9.34□□□□□ -0.91
CTNNA1-228ENST00000521640 MAP3K4Q9Y6R4 1608 aa9.34□□□□□ -0.91
CTNNA1-228ENST00000521640 CEP152O94986 1710 aa9.34□□□□□ -0.91
CTNNA1-228ENST00000521640 CD109Q6YHK3 1445 aa9.34□□□□□ -0.91
CTNNA1-228ENST00000521640 ARHGAP33O14559 1287 aa9.34□□□□□ -0.91
CTNNA1-228ENST00000521640 ANP32CO43423 234 aa9.34□□□□□ -0.91
CTNNA1-228ENST00000521640 OSBPP22059 807 aa9.34□□□□□ -0.91
CTNNA1-228ENST00000521640 EPAS1Q99814 870 aa9.34□□□□□ -0.91
CTNNA1-228ENST00000521640 KANK1Q14678 1352 aa9.34□□□□□ -0.91
CTNNA1-228ENST00000521640 PRAG1Q86YV5 1406 aa9.33□□□□□ -0.92
CTNNA1-228ENST00000521640 LSM11P83369 360 aaKnown RBP eCLIP9.33□□□□□ -0.92
CTNNA1-228ENST00000521640 ROCK2O75116 1388 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-228ENST00000521640 USP47Q96K76 1375 aa9.33□□□□□ -0.92
CTNNA1-228ENST00000521640 WASHC2AQ641Q2 1341 aa9.32□□□□□ -0.92
CTNNA1-228ENST00000521640 EFCAB6Q5THR3 1501 aa9.32□□□□□ -0.92
CTNNA1-228ENST00000521640 EN1Q05925 392 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-228ENST00000521640 FBXW7Q969H0 707 aa9.32□□□□□ -0.92
CTNNA1-228ENST00000521640 A2MP01023 1474 aa9.32□□□□□ -0.92
CTNNA1-228ENST00000521640 COL9A1P20849 921 aa9.31□□□□□ -0.92
CTNNA1-228ENST00000521640 TSR1Q2NL82 804 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-228ENST00000521640 KIAA1210Q9ULL0 1709 aa9.31□□□□□ -0.92
CTNNA1-228ENST00000521640 TESPA1A2RU30 521 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-228ENST00000521640 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-228ENST00000521640 PTPREP23469 700 aa9.3□□□□□ -0.92
CTNNA1-228ENST00000521640 C6orf132Q5T0Z8 1188 aa9.3□□□□□ -0.92
CTNNA1-228ENST00000521640 ANKRD13DQ6ZTN6 518 aa9.3□□□□□ -0.92
CTNNA1-228ENST00000521640 ZC3H13Q5T200 1668 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-228ENST00000521640 MAP3K7O43318 606 aa9.29□□□□□ -0.92
CTNNA1-228ENST00000521640 AFAP1Q8N556 730 aa9.29□□□□□ -0.92
CTNNA1-228ENST00000521640 ZMYM4Q5VZL5 1548 aa9.29□□□□□ -0.92
CTNNA1-228ENST00000521640 FRMPD1Q5SYB0 1578 aa9.29□□□□□ -0.92
CTNNA1-228ENST00000521640 RICTORQ6R327 1708 aa9.28□□□□□ -0.92
CTNNA1-228ENST00000521640 RIMBP3CA6NJZ7 1639 aa9.28□□□□□ -0.92
CTNNA1-228ENST00000521640 RIMBP3BA6NNM3 1639 aa9.28□□□□□ -0.92
CTNNA1-228ENST00000521640 CLTCL1P53675 1640 aa9.28□□□□□ -0.92
CTNNA1-228ENST00000521640 MADDQ8WXG6 1647 aa9.28□□□□□ -0.92
CTNNA1-228ENST00000521640 RIMBP3Q9UFD9 1639 aa9.28□□□□□ -0.92
CTNNA1-228ENST00000521640 SPNS2Q8IVW8 549 aa9.28□□□□□ -0.92
CTNNA1-228ENST00000521640 KIF7Q2M1P5 1343 aa9.28□□□□□ -0.92
CTNNA1-228ENST00000521640 MYOM2P54296 1465 aa9.28□□□□□ -0.92
CTNNA1-228ENST00000521640 ABCA6Q8N139 1617 aa9.27□□□□□ -0.92
CTNNA1-228ENST00000521640 KTN1Q86UP2 1357 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-228ENST00000521640 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
CTNNA1-228ENST00000521640 REREQ9P2R6 1566 aa9.27□□□□□ -0.93
CTNNA1-228ENST00000521640 PPRC1Q5VV67 1664 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-228ENST00000521640 DIP2BQ9P265 1576 aa9.26□□□□□ -0.93
CTNNA1-228ENST00000521640 DIP2CQ9Y2E4 1556 aa9.26□□□□□ -0.93
CTNNA1-228ENST00000521640 YTHDC1Q96MU7 727 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-228ENST00000521640 ZBED2Q9BTP6 218 aa9.26□□□□□ -0.93
CTNNA1-228ENST00000521640 HIRIP3Q9BW71 556 aaPredicted RBP9.26□□□□□ -0.93
CTNNA1-228ENST00000521640 IFT172Q9UG01 1749 aa9.25□□□□□ -0.93
CTNNA1-228ENST00000521640 ADGRD1Q6QNK2 874 aa9.25□□□□□ -0.93
CTNNA1-228ENST00000521640 DCAF11Q8TEB1 546 aa9.25□□□□□ -0.93
CTNNA1-228ENST00000521640 CARD11Q9BXL7 1154 aa9.25□□□□□ -0.93
CTNNA1-228ENST00000521640 KIF1BO60333 1816 aa9.25□□□□□ -0.93
CTNNA1-228ENST00000521640 IQGAP1P46940 1657 aa9.25□□□□□ -0.93
CTNNA1-228ENST00000521640 ARHGAP31Q2M1Z3 1444 aa9.24□□□□□ -0.93
CTNNA1-228ENST00000521640 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
CTNNA1-228ENST00000521640 PROX2Q3B8N5 592 aa9.24□□□□□ -0.93
CTNNA1-228ENST00000521640 VPS9D1Q9Y2B5 631 aa9.24□□□□□ -0.93
CTNNA1-228ENST00000521640 COL17A1Q9UMD9 1497 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-228ENST00000521640 ABCC3O15438 1527 aa9.23□□□□□ -0.93
CTNNA1-228ENST00000521640 ADGRB3O60242 1522 aa9.23□□□□□ -0.93
CTNNA1-228ENST00000521640 GTF3C3Q9Y5Q9 886 aa9.23□□□□□ -0.93
CTNNA1-228ENST00000521640 NRXN1Q9ULB1 1477 aa9.22□□□□□ -0.93
CTNNA1-228ENST00000521640 C11orf95C9JLR9 678 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-228ENST00000521640 TK2O00142 265 aa9.22□□□□□ -0.93
CTNNA1-228ENST00000521640 KIF3BO15066 747 aa9.22□□□□□ -0.93
CTNNA1-228ENST00000521640 RBM26Q5T8P6 1007 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-228ENST00000521640 NPDC1Q9NQX5 325 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-228ENST00000521640 CAMSAP1Q5T5Y3 1602 aa9.22□□□□□ -0.93
CTNNA1-228ENST00000521640 PIK3C2BO00750 1634 aa9.21□□□□□ -0.93
CTNNA1-228ENST00000521640 HRO43593 1189 aa9.21□□□□□ -0.94
CTNNA1-228ENST00000521640 SLC4A5Q9BY07 1137 aa9.21□□□□□ -0.94
CTNNA1-228ENST00000521640 PRKRIP1Q9H875 184 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-228ENST00000521640 AGLP35573 1532 aa9.21□□□□□ -0.94
CTNNA1-228ENST00000521640 SETBP1Q9Y6X0 1596 aa9.2□□□□□ -0.94
CTNNA1-228ENST00000521640 PLSCR2Q9NRY7 297 aa9.2□□□□□ -0.94
CTNNA1-228ENST00000521640 WASHC2CQ9Y4E1 1318 aa9.2□□□□□ -0.94
CTNNA1-228ENST00000521640 NOS1P29475 1434 aa9.2□□□□□ -0.94
CTNNA1-228ENST00000521640 SCAF11Q99590 1463 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-228ENST00000521640 ZNF326Q5BKZ1 582 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-228ENST00000521640 EIF3AQ14152 1382 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-228ENST00000521640 NPATQ14207 1427 aa9.19□□□□□ -0.94
CTNNA1-228ENST00000521640 MYO3AQ8NEV4 1616 aa9.19□□□□□ -0.94
CTNNA1-228ENST00000521640 MMRN1Q13201 1228 aa9.18□□□□□ -0.94
CTNNA1-228ENST00000521640 FAM198AQ9UFP1 575 aa9.18□□□□□ -0.94
CTNNA1-228ENST00000521640 PPLO60437 1756 aa9.17□□□□□ -0.94
CTNNA1-228ENST00000521640 MROH2AA6NES4 1674 aa9.17□□□□□ -0.94
CTNNA1-228ENST00000521640 SBNO2Q9Y2G9 1366 aa9.17□□□□□ -0.94
CTNNA1-228ENST00000521640 RPGRIP1LQ68CZ1 1315 aa9.17□□□□□ -0.94
CTNNA1-228ENST00000521640 ST20-MTHFSA0A0A6YYL1 179 aa9.17□□□□□ -0.94
CTNNA1-228ENST00000521640 NUTM2FA1L443 756 aa9.17□□□□□ -0.94
CTNNA1-228ENST00000521640 BHMG1C9JSJ3 638 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-228ENST00000521640 TSKSQ9UJT2 592 aa9.17□□□□□ -0.94
CTNNA1-228ENST00000521640 MYT1LQ9UL68 1186 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms