RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 CCDC61Q9Y6R9 512 aa28.51■■■□□ 2.15
CERNA3-201ENST00000521403 BRWD3Q6RI45 1802 aa28.5■■■□□ 2.15
CERNA3-201ENST00000521403 COL14A1Q05707 1796 aaKnown RBP28.5■■■□□ 2.15
CERNA3-201ENST00000521403 A0A0G2JS52 829 aa28.5■■■□□ 2.15
CERNA3-201ENST00000521403 MYT1Q01538 1121 aa28.5■■■□□ 2.15
CERNA3-201ENST00000521403 L3MBTL2Q969R5 705 aa28.49■■■□□ 2.15
CERNA3-201ENST00000521403 NRAPQ86VF7 1730 aa28.49■■■□□ 2.15
CERNA3-201ENST00000521403 ACEP12821 1306 aa28.48■■■□□ 2.15
CERNA3-201ENST00000521403 CENPJQ9HC77 1338 aaPredicted RBP28.48■■■□□ 2.15
CERNA3-201ENST00000521403 PRDM11Q9NQV5 511 aa28.48■■■□□ 2.15
CERNA3-201ENST00000521403 CRYBG1Q9Y4K1 1723 aa28.48■■■□□ 2.15
CERNA3-201ENST00000521403 TOPAZ1Q8N9V7 1692 aa28.48■■■□□ 2.15
CERNA3-201ENST00000521403 SRPK2P78362 688 aaKnown RBP28.47■■■□□ 2.15
CERNA3-201ENST00000521403 POLR3AO14802 1390 aaPredicted RBP28.47■■■□□ 2.15
CERNA3-201ENST00000521403 ONECUT3O60422 494 aaPredicted RBP28.46■■■□□ 2.15
CERNA3-201ENST00000521403 NBPF8Q3BBV2 869 aa28.46■■■□□ 2.15
CERNA3-201ENST00000521403 NUTM2GQ5VZR2 741 aa28.46■■■□□ 2.15
CERNA3-201ENST00000521403 SIN3AQ96ST3 1273 aa28.46■■■□□ 2.15
CERNA3-201ENST00000521403 FAM98CQ17RN3 349 aaKnown RBP28.45■■■□□ 2.14
CERNA3-201ENST00000521403 KRT27Q7Z3Y8 459 aa28.45■■■□□ 2.14
CERNA3-201ENST00000521403 BLMP54132 1417 aaPredicted RBP28.44■■■□□ 2.14
CERNA3-201ENST00000521403 PLEKHG3A1L390 1219 aa28.44■■■□□ 2.14
CERNA3-201ENST00000521403 NEUROD1Q13562 356 aa28.44■■■□□ 2.14
CERNA3-201ENST00000521403 KIAA0232Q92628 1395 aa28.42■■■□□ 2.14
CERNA3-201ENST00000521403 CABP2Q9NPB3 220 aa28.42■■■□□ 2.14
CERNA3-201ENST00000521403 ZRANB1Q9UGI0 708 aa28.41■■■□□ 2.14
CERNA3-201ENST00000521403 PPIP5K1Q6PFW1 1433 aa28.41■■■□□ 2.14
CERNA3-201ENST00000521403 QRICH2Q9H0J4 1663 aa28.41■■■□□ 2.14
CERNA3-201ENST00000521403 PHRF1Q9P1Y6 1649 aaKnown RBP28.4■■■□□ 2.14
CERNA3-201ENST00000521403 SF3B2Q13435 895 aaKnown RBP28.4■■■□□ 2.14
CERNA3-201ENST00000521403 CHRNA2Q15822 529 aa28.4■■■□□ 2.14
CERNA3-201ENST00000521403 ZC3H6P61129 1189 aaKnown RBP28.39■■■□□ 2.14
CERNA3-201ENST00000521403 ABTB2Q8N961 1025 aa28.39■■■□□ 2.14
CERNA3-201ENST00000521403 SPATA31A5Q5VU36 1347 aa28.38■■■□□ 2.13
CERNA3-201ENST00000521403 SPATA31A7Q8IWB4 1347 aa28.38■■■□□ 2.13
CERNA3-201ENST00000521403 DEFB132Q7Z7B7 95 aa28.36■■■□□ 2.13
CERNA3-201ENST00000521403 STRN4Q9NRL3 753 aa28.36■■■□□ 2.13
CERNA3-201ENST00000521403 TRPM1Q7Z4N2 1603 aa28.34■■■□□ 2.13
CERNA3-201ENST00000521403 ROCK2O75116 1388 aaKnown RBP28.34■■■□□ 2.13
CERNA3-201ENST00000521403 SRCAPQ6ZRS2 3230 aa28.33■■■□□ 2.13
CERNA3-201ENST00000521403 CABP1Q9NZU7 370 aa28.31■■■□□ 2.12
CERNA3-201ENST00000521403 NRKQ7Z2Y5 1582 aa28.31■■■□□ 2.12
CERNA3-201ENST00000521403 SPATA31A1Q5TZJ5 1347 aa28.29■■■□□ 2.12
CERNA3-201ENST00000521403 EVC2Q86UK5 1308 aa28.29■■■□□ 2.12
CERNA3-201ENST00000521403 EVA1CP58658 441 aa28.29■■■□□ 2.12
CERNA3-201ENST00000521403 NLRP13Q86W25 1043 aa28.29■■■□□ 2.12
CERNA3-201ENST00000521403 USP19O94966 1318 aa28.28■■■□□ 2.12
CERNA3-201ENST00000521403 FAM182BQ5T319 152 aa28.28■■■□□ 2.12
CERNA3-201ENST00000521403 USP35Q9P2H5 1018 aa28.27■■■□□ 2.12
CERNA3-201ENST00000521403 THSD7AQ9UPZ6 1657 aa28.26■■■□□ 2.12
CERNA3-201ENST00000521403 USP6P35125 1406 aa28.26■■■□□ 2.11
CERNA3-201ENST00000521403 BRD4O60885 1362 aaPredicted RBP28.24■■■□□ 2.11
CERNA3-201ENST00000521403 CPDO75976 1380 aa28.24■■■□□ 2.11
CERNA3-201ENST00000521403 GCP02774 474 aa28.24■■■□□ 2.11
CERNA3-201ENST00000521403 SSH2Q76I76 1423 aa28.24■■■□□ 2.11
CERNA3-201ENST00000521403 BAG6P46379 1132 aa28.23■■■□□ 2.11
CERNA3-201ENST00000521403 CAMTA1Q9Y6Y1 1673 aa28.23■■■□□ 2.11
CERNA3-201ENST00000521403 NLRP6P59044 892 aa28.22■■■□□ 2.11
CERNA3-201ENST00000521403 ZBTB7CA1YPR0 619 aa28.21■■■□□ 2.11
CERNA3-201ENST00000521403 LARP1Q6PKG0 1096 aaKnown RBP28.21■■■□□ 2.11
CERNA3-201ENST00000521403 LMO7Q8WWI1 1683 aa28.19■■■□□ 2.1
CERNA3-201ENST00000521403 RGPD1P0DJD0 1748 aa28.16■■■□□ 2.1
CERNA3-201ENST00000521403 BARGINQ6ZT62 677 aa28.16■■■□□ 2.1
CERNA3-201ENST00000521403 EN1Q05925 392 aaPredicted RBP28.15■■■□□ 2.1
CERNA3-201ENST00000521403 TCP11L2Q8N4U5 519 aa28.15■■■□□ 2.1
CERNA3-201ENST00000521403 COL5A2P05997 1499 aaPredicted RBP28.14■■■□□ 2.09
CERNA3-201ENST00000521403 PIK3C2AO00443 1686 aa28.13■■■□□ 2.09
CERNA3-201ENST00000521403 TONSLQ96HA7 1378 aa28.13■■■□□ 2.09
CERNA3-201ENST00000521403 PDE3BQ13370 1112 aa28.13■■■□□ 2.09
CERNA3-201ENST00000521403 FAM196AQ6ZSG2 479 aa28.13■■■□□ 2.09
CERNA3-201ENST00000521403 ZNF692Q9BU19 519 aaPredicted RBP28.13■■■□□ 2.09
CERNA3-201ENST00000521403 CARD11Q9BXL7 1154 aa28.13■■■□□ 2.09
CERNA3-201ENST00000521403 SLIT3O75094 1523 aa28.13■■■□□ 2.09
CERNA3-201ENST00000521403 TTC21BQ7Z4L5 1316 aa28.11■■■□□ 2.09
CERNA3-201ENST00000521403 TRIM37O94972 964 aa28.1■■■□□ 2.09
CERNA3-201ENST00000521403 THRAP3Q9Y2W1 955 aaKnown RBP28.09■■■□□ 2.09
CERNA3-201ENST00000521403 AATKQ6ZMQ8 1374 aa28.09■■■□□ 2.09
CERNA3-201ENST00000521403 TNS1Q9HBL0 1735 aaKnown RBP28.09■■■□□ 2.09
CERNA3-201ENST00000521403 AKAP12Q02952 1782 aa28.09■■■□□ 2.09
CERNA3-201ENST00000521403 SOX12O15370 315 aa28.08■■■□□ 2.09
CERNA3-201ENST00000521403 PSDA5PKW4 1024 aaPredicted RBP28.07■■■□□ 2.08
CERNA3-201ENST00000521403 KTN1Q86UP2 1357 aaKnown RBP28.07■■■□□ 2.08
CERNA3-201ENST00000521403 SBNO2Q9Y2G9 1366 aa28.07■■■□□ 2.08
CERNA3-201ENST00000521403 CRB1P82279 1406 aa28.07■■■□□ 2.08
CERNA3-201ENST00000521403 TTC21AQ8NDW8 1320 aa28.06■■■□□ 2.08
CERNA3-201ENST00000521403 DISP2A7MBM2 1401 aa28.06■■■□□ 2.08
CERNA3-201ENST00000521403 CPSF1Q10570 1443 aaKnown RBP28.05■■■□□ 2.08
CERNA3-201ENST00000521403 TOM1L2Q6ZVM7 507 aa28.04■■■□□ 2.08
CERNA3-201ENST00000521403 KCNH5Q8NCM2 988 aa28.04■■■□□ 2.08
CERNA3-201ENST00000521403 EZH2Q15910 746 aaKnown RBP28.03■■■□□ 2.08
CERNA3-201ENST00000521403 APBA3O96018 575 aa28.02■■■□□ 2.08
CERNA3-201ENST00000521403 TMC1Q8TDI8 760 aa28.01■■■□□ 2.07
CERNA3-201ENST00000521403 AXIN2Q9Y2T1 843 aa28.01■■■□□ 2.07
CERNA3-201ENST00000521403 ARHGEF25Q86VW2 580 aa28■■■□□ 2.07
CERNA3-201ENST00000521403 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28■■■□□ 2.07
CERNA3-201ENST00000521403 COL18A1P39060 1754 aa28■■■□□ 2.07
CERNA3-201ENST00000521403 PARP4Q9UKK3 1724 aaKnown RBP28■■■□□ 2.07
CERNA3-201ENST00000521403 MON2Q7Z3U7 1717 aa27.98■■■□□ 2.07
CERNA3-201ENST00000521403 TRIM26Q12899 539 aaPredicted RBP27.98■■■□□ 2.07
CERNA3-201ENST00000521403 CAMKK2Q96RR4 588 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms