RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 COL14A1Q05707 1796 aaKnown RBP29.64■■■□□ 2.34
SNHG6-205ENST00000521399 ITSN1Q15811 1721 aa29.62■■■□□ 2.33
SNHG6-205ENST00000521399 ATP7BP35670 1465 aa29.62■■■□□ 2.33
SNHG6-205ENST00000521399 PAK3O75914 559 aaPredicted RBP29.62■■■□□ 2.33
SNHG6-205ENST00000521399 CRYBG1Q9Y4K1 1723 aa29.62■■■□□ 2.33
SNHG6-205ENST00000521399 SF3B2Q13435 895 aaKnown RBP29.61■■■□□ 2.33
SNHG6-205ENST00000521399 DEFB132Q7Z7B7 95 aa29.61■■■□□ 2.33
SNHG6-205ENST00000521399 NUDT16Q96DE0 195 aaKnown RBP29.61■■■□□ 2.33
SNHG6-205ENST00000521399 FAM98CQ17RN3 349 aaKnown RBP29.59■■■□□ 2.33
SNHG6-205ENST00000521399 A0A0G2JS52 829 aa29.58■■■□□ 2.33
SNHG6-205ENST00000521399 MYT1Q01538 1121 aa29.58■■■□□ 2.33
SNHG6-205ENST00000521399 CDK19Q9BWU1 502 aa29.57■■■□□ 2.32
SNHG6-205ENST00000521399 KIAA1210Q9ULL0 1709 aa29.55■■■□□ 2.32
SNHG6-205ENST00000521399 SPATA31A5Q5VU36 1347 aa29.54■■■□□ 2.32
SNHG6-205ENST00000521399 SPATA31A7Q8IWB4 1347 aa29.54■■■□□ 2.32
SNHG6-205ENST00000521399 PRDM11Q9NQV5 511 aa29.54■■■□□ 2.32
SNHG6-205ENST00000521399 POLR3AO14802 1390 aaPredicted RBP29.51■■■□□ 2.31
SNHG6-205ENST00000521399 TOPAZ1Q8N9V7 1692 aa29.5■■■□□ 2.31
SNHG6-205ENST00000521399 CCDC61Q9Y6R9 512 aa29.5■■■□□ 2.31
SNHG6-205ENST00000521399 KIAA0232Q92628 1395 aa29.49■■■□□ 2.31
SNHG6-205ENST00000521399 ACEP12821 1306 aa29.48■■■□□ 2.31
SNHG6-205ENST00000521399 NBPF1Q3BBV0 1214 aa29.48■■■□□ 2.31
SNHG6-205ENST00000521399 NBPF8Q3BBV2 869 aa29.48■■■□□ 2.31
SNHG6-205ENST00000521399 PHRF1Q9P1Y6 1649 aaKnown RBP29.48■■■□□ 2.31
SNHG6-205ENST00000521399 PLEKHG3A1L390 1219 aa29.47■■■□□ 2.31
SNHG6-205ENST00000521399 BAG6P46379 1132 aa29.46■■■□□ 2.31
SNHG6-205ENST00000521399 THSD7AQ9UPZ6 1657 aa29.46■■■□□ 2.31
SNHG6-205ENST00000521399 CHRNA2Q15822 529 aa29.45■■■□□ 2.31
SNHG6-205ENST00000521399 NUTM2GQ5VZR2 741 aa29.45■■■□□ 2.31
SNHG6-205ENST00000521399 ZC3H6P61129 1189 aaKnown RBP29.44■■■□□ 2.3
SNHG6-205ENST00000521399 SPATA31A1Q5TZJ5 1347 aa29.43■■■□□ 2.3
SNHG6-205ENST00000521399 FAM182BQ5T319 152 aa29.42■■■□□ 2.3
SNHG6-205ENST00000521399 RGPD1P0DJD0 1748 aa29.4■■■□□ 2.3
SNHG6-205ENST00000521399 STRN4Q9NRL3 753 aa29.4■■■□□ 2.3
SNHG6-205ENST00000521399 ABTB2Q8N961 1025 aa29.39■■■□□ 2.3
SNHG6-205ENST00000521399 CENPJQ9HC77 1338 aaPredicted RBP29.39■■■□□ 2.3
SNHG6-205ENST00000521399 SRPK2P78362 688 aaKnown RBP29.37■■■□□ 2.29
SNHG6-205ENST00000521399 NRKQ7Z2Y5 1582 aa29.36■■■□□ 2.29
SNHG6-205ENST00000521399 EN1Q05925 392 aaPredicted RBP29.36■■■□□ 2.29
SNHG6-205ENST00000521399 PPIP5K1Q6PFW1 1433 aa29.36■■■□□ 2.29
SNHG6-205ENST00000521399 CABP2Q9NPB3 220 aa29.34■■■□□ 2.29
SNHG6-205ENST00000521399 USP19O94966 1318 aa29.34■■■□□ 2.29
SNHG6-205ENST00000521399 EVA1CP58658 441 aa29.33■■■□□ 2.29
SNHG6-205ENST00000521399 CPDO75976 1380 aa29.33■■■□□ 2.29
SNHG6-205ENST00000521399 SSH2Q76I76 1423 aa29.33■■■□□ 2.29
SNHG6-205ENST00000521399 CAMTA1Q9Y6Y1 1673 aa29.32■■■□□ 2.28
SNHG6-205ENST00000521399 DISP2A7MBM2 1401 aa29.32■■■□□ 2.28
SNHG6-205ENST00000521399 USP35Q9P2H5 1018 aa29.32■■■□□ 2.28
SNHG6-205ENST00000521399 TNS1Q9HBL0 1735 aaKnown RBP29.31■■■□□ 2.28
SNHG6-205ENST00000521399 QRICH2Q9H0J4 1663 aa29.31■■■□□ 2.28
SNHG6-205ENST00000521399 LRP5O75197 1615 aa29.31■■■□□ 2.28
SNHG6-205ENST00000521399 PSDA5PKW4 1024 aaPredicted RBP29.31■■■□□ 2.28
SNHG6-205ENST00000521399 BARGINQ6ZT62 677 aa29.31■■■□□ 2.28
SNHG6-205ENST00000521399 NLRP13Q86W25 1043 aa29.31■■■□□ 2.28
SNHG6-205ENST00000521399 FAM196AQ6ZSG2 479 aa29.3■■■□□ 2.28
SNHG6-205ENST00000521399 LMO7Q8WWI1 1683 aa29.3■■■□□ 2.28
SNHG6-205ENST00000521399 BRD4O60885 1362 aaPredicted RBP29.29■■■□□ 2.28
SNHG6-205ENST00000521399 L3MBTL2Q969R5 705 aa29.29■■■□□ 2.28
SNHG6-205ENST00000521399 GCP02774 474 aa29.28■■■□□ 2.28
SNHG6-205ENST00000521399 LARP1Q6PKG0 1096 aaKnown RBP29.28■■■□□ 2.28
SNHG6-205ENST00000521399 TRIM37O94972 964 aa29.26■■■□□ 2.27
SNHG6-205ENST00000521399 CABP1Q9NZU7 370 aa29.26■■■□□ 2.27
SNHG6-205ENST00000521399 TCP11L2Q8N4U5 519 aa29.25■■■□□ 2.27
SNHG6-205ENST00000521399 EZH2Q15910 746 aaKnown RBP29.24■■■□□ 2.27
SNHG6-205ENST00000521399 USP6P35125 1406 aa29.23■■■□□ 2.27
SNHG6-205ENST00000521399 PDE3BQ13370 1112 aa29.23■■■□□ 2.27
SNHG6-205ENST00000521399 CAMKK2Q96RR4 588 aa29.22■■■□□ 2.27
SNHG6-205ENST00000521399 THRAP3Q9Y2W1 955 aaKnown RBP29.21■■■□□ 2.27
SNHG6-205ENST00000521399 NLRP6P59044 892 aa29.2■■■□□ 2.26
SNHG6-205ENST00000521399 R3HDM1Q15032 1099 aaKnown RBP29.2■■■□□ 2.26
SNHG6-205ENST00000521399 SIN3AQ96ST3 1273 aa29.2■■■□□ 2.26
SNHG6-205ENST00000521399 COL5A2P05997 1499 aaPredicted RBP29.2■■■□□ 2.26
SNHG6-205ENST00000521399 TRPM1Q7Z4N2 1603 aa29.2■■■□□ 2.26
SNHG6-205ENST00000521399 EVC2Q86UK5 1308 aa29.2■■■□□ 2.26
SNHG6-205ENST00000521399 APBA3O96018 575 aa29.18■■■□□ 2.26
SNHG6-205ENST00000521399 PARD3Q8TEW0 1356 aa29.17■■■□□ 2.26
SNHG6-205ENST00000521399 SLIT3O75094 1523 aa29.16■■■□□ 2.26
SNHG6-205ENST00000521399 AATKQ6ZMQ8 1374 aa29.15■■■□□ 2.26
SNHG6-205ENST00000521399 PARP4Q9UKK3 1724 aaKnown RBP29.14■■■□□ 2.26
SNHG6-205ENST00000521399 CRB1P82279 1406 aa29.14■■■□□ 2.26
SNHG6-205ENST00000521399 ROCK2O75116 1388 aaKnown RBP29.13■■■□□ 2.25
SNHG6-205ENST00000521399 PIK3C2AO00443 1686 aa29.13■■■□□ 2.25
SNHG6-205ENST00000521399 ZBTB7CA1YPR0 619 aa29.13■■■□□ 2.25
SNHG6-205ENST00000521399 NEUROD1Q13562 356 aa29.12■■■□□ 2.25
SNHG6-205ENST00000521399 ZNF692Q9BU19 519 aaPredicted RBP29.1■■■□□ 2.25
SNHG6-205ENST00000521399 RREB1Q92766 1687 aa29.09■■■□□ 2.25
SNHG6-205ENST00000521399 COL18A1P39060 1754 aa29.09■■■□□ 2.25
SNHG6-205ENST00000521399 C11orf95C9JLR9 678 aaPredicted RBP29.07■■■□□ 2.24
SNHG6-205ENST00000521399 AKAP12Q02952 1782 aa29.07■■■□□ 2.24
SNHG6-205ENST00000521399 TTC21BQ7Z4L5 1316 aa29.07■■■□□ 2.24
SNHG6-205ENST00000521399 NUP188Q5SRE5 1749 aa29.06■■■□□ 2.24
SNHG6-205ENST00000521399 TOM1L2Q6ZVM7 507 aa29.05■■■□□ 2.24
SNHG6-205ENST00000521399 AXIN2Q9Y2T1 843 aa29.05■■■□□ 2.24
SNHG6-205ENST00000521399 OVOS2A0A0G2JMS6 1433 aa29.03■■■□□ 2.24
SNHG6-205ENST00000521399 OVOS2A0A0J9YW53 1432 aa29.03■■■□□ 2.24
SNHG6-205ENST00000521399 CPSF1Q10570 1443 aaKnown RBP29.03■■■□□ 2.24
SNHG6-205ENST00000521399 OVOS2Q6IE36 1432 aa29.03■■■□□ 2.24
SNHG6-205ENST00000521399 TTC21AQ8NDW8 1320 aa29.03■■■□□ 2.24
SNHG6-205ENST00000521399 ARHGEF25Q86VW2 580 aa29.03■■■□□ 2.24
SNHG6-205ENST00000521399 KCNH5Q8NCM2 988 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms