RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ANO8Q9HCE9 1232 aaPredicted RBP11.63□□□□□ -0.55
CTNNA1-227ENST00000521387 GOLGB1Q14789 3259 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-227ENST00000521387 THSD7AQ9UPZ6 1657 aa11.62□□□□□ -0.55
CTNNA1-227ENST00000521387 CASZ1Q86V15 1759 aa11.62□□□□□ -0.55
CTNNA1-227ENST00000521387 SPATA31A5Q5VU36 1347 aa11.61□□□□□ -0.55
CTNNA1-227ENST00000521387 SPATA31A7Q8IWB4 1347 aa11.61□□□□□ -0.55
CTNNA1-227ENST00000521387 SGIP1Q9BQI5 828 aa11.61□□□□□ -0.55
CTNNA1-227ENST00000521387 MYOM3Q5VTT5 1437 aa11.6□□□□□ -0.55
CTNNA1-227ENST00000521387 NRAPQ86VF7 1730 aa11.6□□□□□ -0.55
CTNNA1-227ENST00000521387 PCDH10Q9P2E7 1040 aa11.6□□□□□ -0.55
CTNNA1-227ENST00000521387 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
CTNNA1-227ENST00000521387 DNAJC5GQ8N7S2 189 aa11.59□□□□□ -0.55
CTNNA1-227ENST00000521387 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
CTNNA1-227ENST00000521387 BTG4Q9NY30 223 aa11.59□□□□□ -0.55
CTNNA1-227ENST00000521387 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
CTNNA1-227ENST00000521387 LRPPRCP42704 1394 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-227ENST00000521387 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
CTNNA1-227ENST00000521387 KRT28Q7Z3Y7 464 aa11.56□□□□□ -0.56
CTNNA1-227ENST00000521387 GABBR2O75899 941 aa11.55□□□□□ -0.56
CTNNA1-227ENST00000521387 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
CTNNA1-227ENST00000521387 LHX8Q68G74 356 aa11.55□□□□□ -0.56
CTNNA1-227ENST00000521387 DLC1Q96QB1 1528 aa11.55□□□□□ -0.56
CTNNA1-227ENST00000521387 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
CTNNA1-227ENST00000521387 CHIC2Q9UKJ5 165 aa11.54□□□□□ -0.56
CTNNA1-227ENST00000521387 PRAG1Q86YV5 1406 aa11.53□□□□□ -0.56
CTNNA1-227ENST00000521387 GPR162Q16538 588 aa11.53□□□□□ -0.56
CTNNA1-227ENST00000521387 PROM2Q8N271 834 aa11.53□□□□□ -0.56
CTNNA1-227ENST00000521387 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.56
CTNNA1-227ENST00000521387 ABCA3Q99758 1704 aa11.52□□□□□ -0.56
CTNNA1-227ENST00000521387 NEXMIFQ5QGS0 1516 aa11.52□□□□□ -0.57
CTNNA1-227ENST00000521387 TNS4Q8IZW8 715 aa11.52□□□□□ -0.57
CTNNA1-227ENST00000521387 CDC42BPGQ6DT37 1551 aa11.52□□□□□ -0.57
CTNNA1-227ENST00000521387 SPATA31A1Q5TZJ5 1347 aa11.52□□□□□ -0.57
CTNNA1-227ENST00000521387 CROCC2H7BZ55 1655 aa11.52□□□□□ -0.57
CTNNA1-227ENST00000521387 MAP3K5Q99683 1374 aa11.52□□□□□ -0.57
CTNNA1-227ENST00000521387 HFM1A2PYH4 1435 aa11.51□□□□□ -0.57
CTNNA1-227ENST00000521387 CCDC144AA2RUR9 1427 aa11.51□□□□□ -0.57
CTNNA1-227ENST00000521387 DAPK1P53355 1430 aa11.51□□□□□ -0.57
CTNNA1-227ENST00000521387 ATP10DQ9P241 1426 aa11.51□□□□□ -0.57
CTNNA1-227ENST00000521387 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
CTNNA1-227ENST00000521387 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
CTNNA1-227ENST00000521387 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
CTNNA1-227ENST00000521387 IQGAP3Q86VI3 1631 aa11.49□□□□□ -0.57
CTNNA1-227ENST00000521387 E9PCH4 1651 aa11.49□□□□□ -0.57
CTNNA1-227ENST00000521387 ZBTB22O15209 634 aa11.49□□□□□ -0.57
CTNNA1-227ENST00000521387 PTF1AQ7RTS3 328 aa11.49□□□□□ -0.57
CTNNA1-227ENST00000521387 ARXQ96QS3 562 aa11.49□□□□□ -0.57
CTNNA1-227ENST00000521387 ANKRD30AQ9BXX3 1397 aa11.49□□□□□ -0.57
CTNNA1-227ENST00000521387 PLSCR1O15162 318 aa11.48□□□□□ -0.57
CTNNA1-227ENST00000521387 KANK4Q5T7N3 995 aaPredicted RBP11.48□□□□□ -0.57
CTNNA1-227ENST00000521387 MTFR1LQ9H019 292 aa11.48□□□□□ -0.57
CTNNA1-227ENST00000521387 NAIPQ13075 1403 aa11.48□□□□□ -0.57
CTNNA1-227ENST00000521387 RRBP1Q9P2E9 1410 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-227ENST00000521387 PCNTO95613 3336 aa11.48□□□□□ -0.57
CTNNA1-227ENST00000521387 SBNO1A3KN83 1393 aa11.47□□□□□ -0.57
CTNNA1-227ENST00000521387 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.57
CTNNA1-227ENST00000521387 CHADLQ6NUI6 762 aa11.46□□□□□ -0.57
CTNNA1-227ENST00000521387 COL14A1Q05707 1796 aaKnown RBP11.46□□□□□ -0.58
CTNNA1-227ENST00000521387 TECPR2O15040 1411 aa11.45□□□□□ -0.58
CTNNA1-227ENST00000521387 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.584e-8■□□□□ 8.4
CTNNA1-227ENST00000521387 PDE3BQ13370 1112 aa11.45□□□□□ -0.58
CTNNA1-227ENST00000521387 LMOD2Q6P5Q4 547 aa11.45□□□□□ -0.58
CTNNA1-227ENST00000521387 SPDYE1Q8NFV5 336 aaPredicted RBP11.45□□□□□ -0.58
CTNNA1-227ENST00000521387 GPBP1L1Q9HC44 474 aaPredicted RBP11.45□□□□□ -0.58
CTNNA1-227ENST00000521387 APLP1P51693 650 aa11.44□□□□□ -0.58
CTNNA1-227ENST00000521387 PSME1Q06323 249 aa11.44□□□□□ -0.58
CTNNA1-227ENST00000521387 WAPLQ7Z5K2 1190 aa11.44□□□□□ -0.58
CTNNA1-227ENST00000521387 BCL11BQ9C0K0 894 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-227ENST00000521387 ANKRD50Q9ULJ7 1429 aa11.43□□□□□ -0.58
CTNNA1-227ENST00000521387 ARHGEF10O15013 1369 aa11.43□□□□□ -0.58
CTNNA1-227ENST00000521387 KIF3CO14782 793 aa11.43□□□□□ -0.58
CTNNA1-227ENST00000521387 SLC15A2Q16348 729 aa11.43□□□□□ -0.58
CTNNA1-227ENST00000521387 BARGINQ6ZT62 677 aa11.43□□□□□ -0.58
CTNNA1-227ENST00000521387 PELP1Q8IZL8 1130 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-227ENST00000521387 JMYQ8N9B5 988 aa11.43□□□□□ -0.58
CTNNA1-227ENST00000521387 ADCY9O60503 1353 aa11.42□□□□□ -0.58
CTNNA1-227ENST00000521387 NLGN2Q8NFZ4 835 aa11.42□□□□□ -0.58
CTNNA1-227ENST00000521387 ZNF526Q8TF50 670 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-227ENST00000521387 PHF8Q9UPP1 1060 aa11.42□□□□□ -0.58
CTNNA1-227ENST00000521387 KIF1AQ12756 1690 aa11.42□□□□□ -0.58
CTNNA1-227ENST00000521387 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
CTNNA1-227ENST00000521387 RGPD3A6NKT7 1758 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-227ENST00000521387 RGPD4Q7Z3J3 1758 aa11.41□□□□□ -0.58
CTNNA1-227ENST00000521387 USP35Q9P2H5 1018 aa11.41□□□□□ -0.58
CTNNA1-227ENST00000521387 HTRA3P83110 453 aa11.39□□□□□ -0.59
CTNNA1-227ENST00000521387 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-227ENST00000521387 STRN4Q9NRL3 753 aa11.39□□□□□ -0.59
CTNNA1-227ENST00000521387 STK32BQ9NY57 414 aa11.39□□□□□ -0.59
CTNNA1-227ENST00000521387 FMN2Q9NZ56 1722 aa11.39□□□□□ -0.59
CTNNA1-227ENST00000521387 WWC3Q9ULE0 1092 aa11.39□□□□□ -0.59
CTNNA1-227ENST00000521387 NRXN1Q9ULB1 1477 aa11.38□□□□□ -0.59
CTNNA1-227ENST00000521387 PEAK1Q9H792 1746 aa11.38□□□□□ -0.59
CTNNA1-227ENST00000521387 CHRNA2Q15822 529 aa11.38□□□□□ -0.59
CTNNA1-227ENST00000521387 KLRG1Q96E93 195 aa11.38□□□□□ -0.59
CTNNA1-227ENST00000521387 GRIN3BO60391 1043 aa11.37□□□□□ -0.59
CTNNA1-227ENST00000521387 TXNRD1Q16881 649 aa11.37□□□□□ -0.59
CTNNA1-227ENST00000521387 PRDM11Q9NQV5 511 aa11.37□□□□□ -0.59
CTNNA1-227ENST00000521387 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-227ENST00000521387 RGPD8O14715 1765 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-227ENST00000521387 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms