RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 RDH13Q8NBN7 331 aa7.49□□□□□ -1.21
VPS13B-208ENST00000521037 FHAD1B1AJZ9 1412 aa7.49□□□□□ -1.21
VPS13B-208ENST00000521037 RUSC2Q8N2Y8 1516 aa7.48□□□□□ -1.21
VPS13B-208ENST00000521037 C11orf95C9JLR9 678 aaPredicted RBP7.48□□□□□ -1.21
VPS13B-208ENST00000521037 WNT7AO00755 349 aa7.48□□□□□ -1.21
VPS13B-208ENST00000521037 WIPF1O43516 503 aa7.48□□□□□ -1.21
VPS13B-208ENST00000521037 WFS1O76024 890 aa7.48□□□□□ -1.21
VPS13B-208ENST00000521037 MMP16P51512 607 aa7.47□□□□□ -1.21
VPS13B-208ENST00000521037 MAP3K4Q9Y6R4 1608 aa7.46□□□□□ -1.21
VPS13B-208ENST00000521037 ASXL2Q76L83 1435 aa7.45□□□□□ -1.22
VPS13B-208ENST00000521037 SNIP1Q8TAD8 396 aaKnown RBP7.45□□□□□ -1.22
VPS13B-208ENST00000521037 TOP2BQ02880 1626 aa7.45□□□□□ -1.22
VPS13B-208ENST00000521037 ADAMTSL3P82987 1691 aa7.44□□□□□ -1.22
VPS13B-208ENST00000521037 PTPRMP28827 1452 aa7.44□□□□□ -1.22
VPS13B-208ENST00000521037 ABCC2Q92887 1545 aa7.44□□□□□ -1.22
VPS13B-208ENST00000521037 SNRPBP14678 240 aaKnown RBP7.44□□□□□ -1.22
VPS13B-208ENST00000521037 TRIM32Q13049 653 aa7.44□□□□□ -1.22
VPS13B-208ENST00000521037 SULF1Q8IWU6 871 aa7.44□□□□□ -1.22
VPS13B-208ENST00000521037 PCF11O94913 1555 aaKnown RBP7.44□□□□□ -1.22
VPS13B-208ENST00000521037 SPATA31D1Q6ZQQ2 1576 aa7.44□□□□□ -1.22
VPS13B-208ENST00000521037 EPRSP07814 1512 aaKnown RBP7.43□□□□□ -1.22
VPS13B-208ENST00000521037 TTC24A2A3L6 582 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-208ENST00000521037 J3QL48 77 aa7.43□□□□□ -1.22
VPS13B-208ENST00000521037 MRGPRX2Q96LB1 330 aa7.43□□□□□ -1.22
VPS13B-208ENST00000521037 ATP13A2Q9NQ11 1180 aa7.43□□□□□ -1.22
VPS13B-208ENST00000521037 ZBTB24O43167 697 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-208ENST00000521037 DXOO77932 396 aaKnown RBP7.42□□□□□ -1.22
VPS13B-208ENST00000521037 CD46P15529 392 aa7.42□□□□□ -1.22
VPS13B-208ENST00000521037 ERICH3Q5RHP9 1530 aa7.42□□□□□ -1.22
VPS13B-208ENST00000521037 SMYD5Q6GMV2 418 aa7.41□□□□□ -1.22
VPS13B-208ENST00000521037 TRIM47Q96LD4 638 aa7.41□□□□□ -1.22
VPS13B-208ENST00000521037 STK17AQ9UEE5 414 aa7.41□□□□□ -1.22
VPS13B-208ENST00000521037 TERTO14746 1132 aaKnown RBP7.4□□□□□ -1.22
VPS13B-208ENST00000521037 HPS1Q92902 700 aa7.4□□□□□ -1.22
VPS13B-208ENST00000521037 PLB1Q6P1J6 1458 aa7.4□□□□□ -1.22
VPS13B-208ENST00000521037 KIF21BO75037 1637 aa7.4□□□□□ -1.22
VPS13B-208ENST00000521037 SKOR1P84550 965 aa7.39□□□□□ -1.23
VPS13B-208ENST00000521037 UHRF1BP1LA0JNW5 1464 aa7.38□□□□□ -1.23
VPS13B-208ENST00000521037 Q3C1V9 767 aa7.38□□□□□ -1.23
VPS13B-208ENST00000521037 GRIPAP1Q4V328 841 aa7.38□□□□□ -1.23
VPS13B-208ENST00000521037 USB1Q9BQ65 265 aaKnown RBP7.38□□□□□ -1.23
VPS13B-208ENST00000521037 HLA-CQ95604 372 aa7.37□□□□□ -1.23
VPS13B-208ENST00000521037 KDM5BQ9UGL1 1544 aa7.37□□□□□ -1.23
VPS13B-208ENST00000521037 LORP23490 312 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-208ENST00000521037 HSPA2P54652 639 aa7.36□□□□□ -1.23
VPS13B-208ENST00000521037 RC3H1Q5TC82 1133 aaKnown RBP7.36□□□□□ -1.23
VPS13B-208ENST00000521037 SENP2Q9HC62 589 aa7.36□□□□□ -1.23
VPS13B-208ENST00000521037 KIAA0586Q9BVV6 1533 aa7.36□□□□□ -1.23
VPS13B-208ENST00000521037 SIAH2O43255 324 aa7.35□□□□□ -1.23
VPS13B-208ENST00000521037 KDM4AO75164 1064 aa7.35□□□□□ -1.23
VPS13B-208ENST00000521037 INSM1Q01101 510 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-208ENST00000521037 TEX14Q8IWB6 1497 aa7.35□□□□□ -1.23
VPS13B-208ENST00000521037 PTPRGP23470 1445 aa7.35□□□□□ -1.23
VPS13B-208ENST00000521037 CUL7Q14999 1698 aa7.35□□□□□ -1.23
VPS13B-208ENST00000521037 MAGI3Q5TCQ9 1506 aa7.34□□□□□ -1.23
VPS13B-208ENST00000521037 WNT7BP56706 349 aa7.34□□□□□ -1.23
VPS13B-208ENST00000521037 WRNQ14191 1432 aaPredicted RBP eCLIP7.34□□□□□ -1.23
VPS13B-208ENST00000521037 REPIN1Q9BWE0 567 aaKnown RBP7.33□□□□□ -1.24
VPS13B-208ENST00000521037 MADDQ8WXG6 1647 aa7.33□□□□□ -1.24
VPS13B-208ENST00000521037 USP46P62068 366 aa7.32□□□□□ -1.24
VPS13B-208ENST00000521037 PTCRAQ6ISU1 281 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-208ENST00000521037 GPIHBP1Q8IV16 184 aa7.32□□□□□ -1.24
VPS13B-208ENST00000521037 BCORL1Q5H9F3 1711 aa7.32□□□□□ -1.24
VPS13B-208ENST00000521037 BIVM-ERCC5R4GMW8 1640 aa7.31□□□□□ -1.24
VPS13B-208ENST00000521037 IRF6O14896 467 aa7.31□□□□□ -1.24
VPS13B-208ENST00000521037 HOXA2O43364 376 aa7.31□□□□□ -1.24
VPS13B-208ENST00000521037 KIFC2Q96AC6 838 aa7.31□□□□□ -1.24
VPS13B-208ENST00000521037 ARAP3Q8WWN8 1544 aa7.31□□□□□ -1.24
VPS13B-208ENST00000521037 UACAQ9BZF9 1416 aa7.3□□□□□ -1.24
VPS13B-208ENST00000521037 MAP2K5Q13163 448 aa7.3□□□□□ -1.24
VPS13B-208ENST00000521037 TRIM46Q7Z4K8 759 aa7.3□□□□□ -1.24
VPS13B-208ENST00000521037 DISP1Q96F81 1524 aa7.3□□□□□ -1.24
VPS13B-208ENST00000521037 ZCCHC11Q5TAX3 1644 aaKnown RBP7.3□□□□□ -1.24
VPS13B-208ENST00000521037 LTBP4Q8N2S1 1624 aa7.3□□□□□ -1.24
VPS13B-208ENST00000521037 SIGLEC1Q9BZZ2 1709 aa7.3□□□□□ -1.24
VPS13B-208ENST00000521037 SYMPKQ92797 1274 aaKnown RBP7.29□□□□□ -1.24
VPS13B-208ENST00000521037 TNIKQ9UKE5 1360 aa7.29□□□□□ -1.24
VPS13B-208ENST00000521037 STRCQ7RTU9 1775 aa7.28□□□□□ -1.24
VPS13B-208ENST00000521037 ALDH1A1P00352 501 aa7.28□□□□□ -1.24
VPS13B-208ENST00000521037 JUNDP17535 347 aa7.28□□□□□ -1.24
VPS13B-208ENST00000521037 MDM2Q00987 491 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-208ENST00000521037 GUCA2AQ02747 115 aa7.28□□□□□ -1.24
VPS13B-208ENST00000521037 CCDC24Q8N4L8 307 aa7.28□□□□□ -1.24
VPS13B-208ENST00000521037 NXF1Q9UBU9 619 aaKnown RBP7.28□□□□□ -1.24
VPS13B-208ENST00000521037 FRMPD1Q5SYB0 1578 aa7.28□□□□□ -1.24
VPS13B-208ENST00000521037 IGF1RP08069 1367 aa7.27□□□□□ -1.25
VPS13B-208ENST00000521037 WDR7Q9Y4E6 1490 aa7.27□□□□□ -1.25
VPS13B-208ENST00000521037 MINK1Q8N4C8 1332 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-208ENST00000521037 NPAS3Q8IXF0 933 aa7.26□□□□□ -1.25
VPS13B-208ENST00000521037 CD109Q6YHK3 1445 aa7.26□□□□□ -1.25
VPS13B-208ENST00000521037 SRCAPQ6ZRS2 3230 aa7.25□□□□□ -1.25
VPS13B-208ENST00000521037 GMPRP36959 345 aa7.25□□□□□ -1.25
VPS13B-208ENST00000521037 FAM217BQ9NTX9 383 aaPredicted RBP7.25□□□□□ -1.25
VPS13B-208ENST00000521037 PCDHGC3Q9UN70 934 aa7.25□□□□□ -1.25
VPS13B-208ENST00000521037 BMP1P13497 986 aa7.24□□□□□ -1.25
VPS13B-208ENST00000521037 SH3BP2P78314 561 aa7.24□□□□□ -1.25
VPS13B-208ENST00000521037 PLCB2Q00722 1185 aa7.24□□□□□ -1.25
VPS13B-208ENST00000521037 RETREG3Q86VR2 466 aa7.24□□□□□ -1.25
VPS13B-208ENST00000521037 NUDT12Q9BQG2 462 aa7.24□□□□□ -1.25
VPS13B-208ENST00000521037 CFAP43Q8NDM7 1665 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms