RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 SEPT12Q8IYM1 358 aa25.78■■□□□ 1.72
VEGFA-222ENST00000520948 ALS2Q96Q42 1657 aa25.77■■□□□ 1.72
VEGFA-222ENST00000520948 BLMP54132 1417 aaPredicted RBP25.77■■□□□ 1.72
VEGFA-222ENST00000520948 TULP4Q9NRJ4 1543 aa25.77■■□□□ 1.72
VEGFA-222ENST00000520948 NRAPQ86VF7 1730 aa25.77■■□□□ 1.72
VEGFA-222ENST00000520948 CARD11Q9BXL7 1154 aa25.76■■□□□ 1.71
VEGFA-222ENST00000520948 PRR36Q9H6K5 1346 aa25.76■■□□□ 1.71
VEGFA-222ENST00000520948 FAM83GA6ND36 823 aa25.75■■□□□ 1.71
VEGFA-222ENST00000520948 SRCAPQ6ZRS2 3230 aa25.74■■□□□ 1.71
VEGFA-222ENST00000520948 EIF3AQ14152 1382 aaKnown RBP25.72■■□□□ 1.71
VEGFA-222ENST00000520948 DEFB132Q7Z7B7 95 aa25.72■■□□□ 1.71
VEGFA-222ENST00000520948 COL14A1Q05707 1796 aaKnown RBP25.71■■□□□ 1.71
VEGFA-222ENST00000520948 CRYBG1Q9Y4K1 1723 aa25.71■■□□□ 1.71
VEGFA-222ENST00000520948 A0A0G2JS52 829 aa25.7■■□□□ 1.7
VEGFA-222ENST00000520948 WASLO00401 505 aaPredicted RBP25.7■■□□□ 1.7
VEGFA-222ENST00000520948 MYT1Q01538 1121 aa25.7■■□□□ 1.7
VEGFA-222ENST00000520948 CENPJQ9HC77 1338 aaPredicted RBP25.69■■□□□ 1.7
VEGFA-222ENST00000520948 ITSN1Q15811 1721 aa25.68■■□□□ 1.7
VEGFA-222ENST00000520948 KRT27Q7Z3Y8 459 aa25.68■■□□□ 1.7
VEGFA-222ENST00000520948 BTG4Q9NY30 223 aa25.68■■□□□ 1.7
VEGFA-222ENST00000520948 ONECUT3O60422 494 aaPredicted RBP25.67■■□□□ 1.7
VEGFA-222ENST00000520948 SF3B2Q13435 895 aaKnown RBP25.67■■□□□ 1.7
VEGFA-222ENST00000520948 NGDNQ8NEJ9 315 aaKnown RBP25.67■■□□□ 1.7
VEGFA-222ENST00000520948 PAK3O75914 559 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-222ENST00000520948 FAM98CQ17RN3 349 aaKnown RBP25.66■■□□□ 1.7
VEGFA-222ENST00000520948 ATP7BP35670 1465 aa25.65■■□□□ 1.7
VEGFA-222ENST00000520948 QRICH2Q9H0J4 1663 aa25.64■■□□□ 1.7
VEGFA-222ENST00000520948 PHRF1Q9P1Y6 1649 aaKnown RBP25.6■■□□□ 1.69
VEGFA-222ENST00000520948 SBNO2Q9Y2G9 1366 aa25.6■■□□□ 1.69
VEGFA-222ENST00000520948 NUDT16Q96DE0 195 aaKnown RBP25.6■■□□□ 1.69
VEGFA-222ENST00000520948 TOPAZ1Q8N9V7 1692 aa25.58■■□□□ 1.69
VEGFA-222ENST00000520948 USP47Q96K76 1375 aa25.58■■□□□ 1.69
VEGFA-222ENST00000520948 ST20-MTHFSA0A0A6YYL1 179 aa25.58■■□□□ 1.69
VEGFA-222ENST00000520948 PRDM11Q9NQV5 511 aa25.58■■□□□ 1.69
VEGFA-222ENST00000520948 FAM182BQ5T319 152 aa25.57■■□□□ 1.68
VEGFA-222ENST00000520948 CDK19Q9BWU1 502 aa25.57■■□□□ 1.68
VEGFA-222ENST00000520948 THSD7AQ9UPZ6 1657 aa25.56■■□□□ 1.68
VEGFA-222ENST00000520948 TESK2Q96S53 571 aa25.56■■□□□ 1.68
VEGFA-222ENST00000520948 SPATA31A5Q5VU36 1347 aa25.56■■□□□ 1.68
VEGFA-222ENST00000520948 SPATA31A7Q8IWB4 1347 aa25.56■■□□□ 1.68
VEGFA-222ENST00000520948 RGPD1P0DJD0 1748 aa25.55■■□□□ 1.68
VEGFA-222ENST00000520948 KIAA0232Q92628 1395 aa25.55■■□□□ 1.68
VEGFA-222ENST00000520948 NUTM2GQ5VZR2 741 aa25.54■■□□□ 1.68
VEGFA-222ENST00000520948 BAG6P46379 1132 aa25.53■■□□□ 1.68
VEGFA-222ENST00000520948 CHRNA2Q15822 529 aa25.53■■□□□ 1.68
VEGFA-222ENST00000520948 EVC2Q86UK5 1308 aa25.51■■□□□ 1.67
VEGFA-222ENST00000520948 PSDA5PKW4 1024 aaPredicted RBP25.5■■□□□ 1.67
VEGFA-222ENST00000520948 ACEP12821 1306 aa25.5■■□□□ 1.67
VEGFA-222ENST00000520948 ZC3H6P61129 1189 aaKnown RBP25.5■■□□□ 1.67
VEGFA-222ENST00000520948 TNS1Q9HBL0 1735 aaKnown RBP25.5■■□□□ 1.67
VEGFA-222ENST00000520948 STRN4Q9NRL3 753 aa25.5■■□□□ 1.67
VEGFA-222ENST00000520948 POLR3AO14802 1390 aaPredicted RBP25.49■■□□□ 1.67
VEGFA-222ENST00000520948 EIF4G2P78344 907 aaKnown RBP eCLIP25.49■■□□□ 1.67
VEGFA-222ENST00000520948 LRP5O75197 1615 aa25.48■■□□□ 1.67
VEGFA-222ENST00000520948 SLC24A1O60721 1099 aa25.48■■□□□ 1.67
VEGFA-222ENST00000520948 NRKQ7Z2Y5 1582 aa25.48■■□□□ 1.67
VEGFA-222ENST00000520948 SPATA31A1Q5TZJ5 1347 aa25.47■■□□□ 1.67
VEGFA-222ENST00000520948 EN1Q05925 392 aaPredicted RBP25.47■■□□□ 1.67
VEGFA-222ENST00000520948 CABP2Q9NPB3 220 aa25.47■■□□□ 1.67
VEGFA-222ENST00000520948 HSPA5P11021 654 aaKnown RBP25.46■■□□□ 1.67
VEGFA-222ENST00000520948 CCDC61Q9Y6R9 512 aa25.46■■□□□ 1.67
VEGFA-222ENST00000520948 SRPK2P78362 688 aaKnown RBP25.45■■□□□ 1.66
VEGFA-222ENST00000520948 PUS7Q96PZ0 661 aaKnown RBP25.45■■□□□ 1.66
VEGFA-222ENST00000520948 USP35Q9P2H5 1018 aa25.44■■□□□ 1.66
VEGFA-222ENST00000520948 PLEKHG3A1L390 1219 aa25.42■■□□□ 1.66
VEGFA-222ENST00000520948 ZEB1P37275 1124 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-222ENST00000520948 ABTB2Q8N961 1025 aa25.42■■□□□ 1.66
VEGFA-222ENST00000520948 PPIP5K1Q6PFW1 1433 aa25.41■■□□□ 1.66
VEGFA-222ENST00000520948 SSH2Q76I76 1423 aa25.41■■□□□ 1.66
VEGFA-222ENST00000520948 LMO7Q8WWI1 1683 aa25.4■■□□□ 1.66
VEGFA-222ENST00000520948 CAMTA1Q9Y6Y1 1673 aa25.4■■□□□ 1.66
VEGFA-222ENST00000520948 EVA1CP58658 441 aa25.4■■□□□ 1.66
VEGFA-222ENST00000520948 DISP2A7MBM2 1401 aa25.38■■□□□ 1.65
VEGFA-222ENST00000520948 TMF1P82094 1093 aa25.38■■□□□ 1.65
VEGFA-222ENST00000520948 TRIM37O94972 964 aa25.37■■□□□ 1.65
VEGFA-222ENST00000520948 EZH2Q15910 746 aaKnown RBP25.37■■□□□ 1.65
VEGFA-222ENST00000520948 USP19O94966 1318 aa25.37■■□□□ 1.65
VEGFA-222ENST00000520948 R3HDM1Q15032 1099 aaKnown RBP25.36■■□□□ 1.65
VEGFA-222ENST00000520948 LARP1Q6PKG0 1096 aaKnown RBP25.36■■□□□ 1.65
VEGFA-222ENST00000520948 FAM196AQ6ZSG2 479 aa25.35■■□□□ 1.65
VEGFA-222ENST00000520948 CABP1Q9NZU7 370 aa25.35■■□□□ 1.65
VEGFA-222ENST00000520948 CPDO75976 1380 aa25.34■■□□□ 1.65
VEGFA-222ENST00000520948 BARGINQ6ZT62 677 aa25.32■■□□□ 1.64
VEGFA-222ENST00000520948 NLRP13Q86W25 1043 aa25.32■■□□□ 1.64
VEGFA-222ENST00000520948 ZBTB7CA1YPR0 619 aa25.31■■□□□ 1.64
VEGFA-222ENST00000520948 GCP02774 474 aa25.31■■□□□ 1.64
VEGFA-222ENST00000520948 PDE3BQ13370 1112 aa25.31■■□□□ 1.64
VEGFA-222ENST00000520948 COL5A2P05997 1499 aaPredicted RBP25.3■■□□□ 1.64
VEGFA-222ENST00000520948 APBA3O96018 575 aa25.3■■□□□ 1.64
VEGFA-222ENST00000520948 CDCA8Q53HL2 280 aa25.3■■□□□ 1.64
VEGFA-222ENST00000520948 TCP11L2Q8N4U5 519 aa25.3■■□□□ 1.64
VEGFA-222ENST00000520948 CAMKK2Q96RR4 588 aa25.3■■□□□ 1.64
VEGFA-222ENST00000520948 C11orf95C9JLR9 678 aaPredicted RBP25.29■■□□□ 1.64
VEGFA-222ENST00000520948 RREB1Q92766 1687 aa25.29■■□□□ 1.64
VEGFA-222ENST00000520948 USP6P35125 1406 aa25.29■■□□□ 1.64
VEGFA-222ENST00000520948 PARP4Q9UKK3 1724 aaKnown RBP25.28■■□□□ 1.64
VEGFA-222ENST00000520948 CPSF1Q10570 1443 aaKnown RBP25.28■■□□□ 1.64
VEGFA-222ENST00000520948 PIK3C2AO00443 1686 aa25.27■■□□□ 1.64
VEGFA-222ENST00000520948 SLC12A5Q9H2X9 1139 aa25.27■■□□□ 1.64
VEGFA-222ENST00000520948 NUP188Q5SRE5 1749 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms