RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CRYBG1Q9Y4K1 1723 aa28.46■■■□□ 2.15
PABPC1-215ENST00000520804 ONECUT3O60422 494 aaPredicted RBP28.46■■■□□ 2.15
PABPC1-215ENST00000520804 SEPT12Q8IYM1 358 aa28.46■■■□□ 2.15
PABPC1-215ENST00000520804 COL14A1Q05707 1796 aaKnown RBP28.45■■■□□ 2.15
PABPC1-215ENST00000520804 TOPAZ1Q8N9V7 1692 aa28.44■■■□□ 2.14
PABPC1-215ENST00000520804 BTG4Q9NY30 223 aa28.43■■■□□ 2.14
PABPC1-215ENST00000520804 CCDC61Q9Y6R9 512 aa28.42■■■□□ 2.14
PABPC1-215ENST00000520804 POLR3AO14802 1390 aaPredicted RBP28.41■■■□□ 2.14
PABPC1-215ENST00000520804 BLMP54132 1417 aaPredicted RBP28.39■■■□□ 2.14
PABPC1-215ENST00000520804 ACEP12821 1306 aa28.39■■■□□ 2.13
PABPC1-215ENST00000520804 PLEKHG3A1L390 1219 aa28.38■■■□□ 2.13
PABPC1-215ENST00000520804 NBPF8Q3BBV2 869 aa28.37■■■□□ 2.13
PABPC1-215ENST00000520804 CENPJQ9HC77 1338 aaPredicted RBP28.37■■■□□ 2.13
PABPC1-215ENST00000520804 KRT27Q7Z3Y8 459 aa28.36■■■□□ 2.13
PABPC1-215ENST00000520804 L3MBTL2Q969R5 705 aa28.36■■■□□ 2.13
PABPC1-215ENST00000520804 PRDM11Q9NQV5 511 aa28.36■■■□□ 2.13
PABPC1-215ENST00000520804 PHRF1Q9P1Y6 1649 aaKnown RBP28.36■■■□□ 2.13
PABPC1-215ENST00000520804 FAM98CQ17RN3 349 aaKnown RBP28.34■■■□□ 2.13
PABPC1-215ENST00000520804 ZRANB1Q9UGI0 708 aa28.33■■■□□ 2.13
PABPC1-215ENST00000520804 KIAA0232Q92628 1395 aa28.33■■■□□ 2.13
PABPC1-215ENST00000520804 A0A0G2JS52 829 aa28.32■■■□□ 2.12
PABPC1-215ENST00000520804 SRPK2P78362 688 aaKnown RBP28.32■■■□□ 2.12
PABPC1-215ENST00000520804 MYT1Q01538 1121 aa28.32■■■□□ 2.12
PABPC1-215ENST00000520804 SPATA31A5Q5VU36 1347 aa28.32■■■□□ 2.12
PABPC1-215ENST00000520804 SPATA31A7Q8IWB4 1347 aa28.32■■■□□ 2.12
PABPC1-215ENST00000520804 QRICH2Q9H0J4 1663 aa28.32■■■□□ 2.12
PABPC1-215ENST00000520804 NUTM2GQ5VZR2 741 aa28.31■■■□□ 2.12
PABPC1-215ENST00000520804 SIN3AQ96ST3 1273 aa28.31■■■□□ 2.12
PABPC1-215ENST00000520804 PPIP5K1Q6PFW1 1433 aa28.3■■■□□ 2.12
PABPC1-215ENST00000520804 CABP2Q9NPB3 220 aa28.29■■■□□ 2.12
PABPC1-215ENST00000520804 SF3B2Q13435 895 aaKnown RBP28.28■■■□□ 2.12
PABPC1-215ENST00000520804 ZC3H6P61129 1189 aaKnown RBP28.27■■■□□ 2.12
PABPC1-215ENST00000520804 CHRNA2Q15822 529 aa28.27■■■□□ 2.12
PABPC1-215ENST00000520804 DEFB132Q7Z7B7 95 aa28.27■■■□□ 2.12
PABPC1-215ENST00000520804 ABTB2Q8N961 1025 aa28.27■■■□□ 2.12
PABPC1-215ENST00000520804 TRPM1Q7Z4N2 1603 aa28.27■■■□□ 2.12
PABPC1-215ENST00000520804 NRKQ7Z2Y5 1582 aa28.24■■■□□ 2.11
PABPC1-215ENST00000520804 THSD7AQ9UPZ6 1657 aa28.24■■■□□ 2.11
PABPC1-215ENST00000520804 NEUROD1Q13562 356 aa28.24■■■□□ 2.11
PABPC1-215ENST00000520804 USP19O94966 1318 aa28.22■■■□□ 2.11
PABPC1-215ENST00000520804 SPATA31A1Q5TZJ5 1347 aa28.22■■■□□ 2.11
PABPC1-215ENST00000520804 STRN4Q9NRL3 753 aa28.22■■■□□ 2.11
PABPC1-215ENST00000520804 BRD4O60885 1362 aaPredicted RBP28.22■■■□□ 2.11
PABPC1-215ENST00000520804 CABP1Q9NZU7 370 aa28.2■■■□□ 2.1
PABPC1-215ENST00000520804 CPDO75976 1380 aa28.2■■■□□ 2.1
PABPC1-215ENST00000520804 NLRP13Q86W25 1043 aa28.19■■■□□ 2.1
PABPC1-215ENST00000520804 ROCK2O75116 1388 aaKnown RBP28.19■■■□□ 2.1
PABPC1-215ENST00000520804 EVC2Q86UK5 1308 aa28.18■■■□□ 2.1
PABPC1-215ENST00000520804 USP6P35125 1406 aa28.17■■■□□ 2.1
PABPC1-215ENST00000520804 SSH2Q76I76 1423 aa28.17■■■□□ 2.1
PABPC1-215ENST00000520804 LMO7Q8WWI1 1683 aa28.16■■■□□ 2.1
PABPC1-215ENST00000520804 CAMTA1Q9Y6Y1 1673 aa28.16■■■□□ 2.1
PABPC1-215ENST00000520804 GCP02774 474 aa28.16■■■□□ 2.1
PABPC1-215ENST00000520804 EVA1CP58658 441 aa28.16■■■□□ 2.1
PABPC1-215ENST00000520804 FAM182BQ5T319 152 aa28.15■■■□□ 2.1
PABPC1-215ENST00000520804 BAG6P46379 1132 aa28.14■■■□□ 2.1
PABPC1-215ENST00000520804 RGPD1P0DJD0 1748 aa28.14■■■□□ 2.1
PABPC1-215ENST00000520804 SRCAPQ6ZRS2 3230 aa28.12■■■□□ 2.09
PABPC1-215ENST00000520804 USP35Q9P2H5 1018 aa28.12■■■□□ 2.09
PABPC1-215ENST00000520804 LARP1Q6PKG0 1096 aaKnown RBP28.11■■■□□ 2.09
PABPC1-215ENST00000520804 BARGINQ6ZT62 677 aa28.11■■■□□ 2.09
PABPC1-215ENST00000520804 NLRP6P59044 892 aa28.1■■■□□ 2.09
PABPC1-215ENST00000520804 SLIT3O75094 1523 aa28.08■■■□□ 2.09
PABPC1-215ENST00000520804 PIK3C2AO00443 1686 aa28.07■■■□□ 2.08
PABPC1-215ENST00000520804 COL5A2P05997 1499 aaPredicted RBP28.07■■■□□ 2.08
PABPC1-215ENST00000520804 TNS1Q9HBL0 1735 aaKnown RBP28.06■■■□□ 2.08
PABPC1-215ENST00000520804 TCP11L2Q8N4U5 519 aa28.06■■■□□ 2.08
PABPC1-215ENST00000520804 DISP2A7MBM2 1401 aa28.05■■■□□ 2.08
PABPC1-215ENST00000520804 EN1Q05925 392 aaPredicted RBP28.05■■■□□ 2.08
PABPC1-215ENST00000520804 FAM196AQ6ZSG2 479 aa28.05■■■□□ 2.08
PABPC1-215ENST00000520804 ZNF692Q9BU19 519 aaPredicted RBP28.05■■■□□ 2.08
PABPC1-215ENST00000520804 THRAP3Q9Y2W1 955 aaKnown RBP28.04■■■□□ 2.08
PABPC1-215ENST00000520804 AKAP12Q02952 1782 aa28.04■■■□□ 2.08
PABPC1-215ENST00000520804 AATKQ6ZMQ8 1374 aa28.02■■■□□ 2.08
PABPC1-215ENST00000520804 TTC21BQ7Z4L5 1316 aa28.02■■■□□ 2.08
PABPC1-215ENST00000520804 PDE3BQ13370 1112 aa28.02■■■□□ 2.08
PABPC1-215ENST00000520804 SBNO2Q9Y2G9 1366 aa28.01■■■□□ 2.07
PABPC1-215ENST00000520804 ZBTB7CA1YPR0 619 aa28.01■■■□□ 2.07
PABPC1-215ENST00000520804 TRIM37O94972 964 aa28■■■□□ 2.07
PABPC1-215ENST00000520804 CRB1P82279 1406 aa28■■■□□ 2.07
PABPC1-215ENST00000520804 CPSF1Q10570 1443 aaKnown RBP28■■■□□ 2.07
PABPC1-215ENST00000520804 CARD11Q9BXL7 1154 aa27.99■■■□□ 2.07
PABPC1-215ENST00000520804 TTC21AQ8NDW8 1320 aa27.98■■■□□ 2.07
PABPC1-215ENST00000520804 COL18A1P39060 1754 aa27.98■■■□□ 2.07
PABPC1-215ENST00000520804 PARP4Q9UKK3 1724 aaKnown RBP27.97■■■□□ 2.07
PABPC1-215ENST00000520804 TONSLQ96HA7 1378 aa27.97■■■□□ 2.07
PABPC1-215ENST00000520804 PSDA5PKW4 1024 aaPredicted RBP27.96■■■□□ 2.07
PABPC1-215ENST00000520804 KTN1Q86UP2 1357 aaKnown RBP27.96■■■□□ 2.07
PABPC1-215ENST00000520804 EZH2Q15910 746 aaKnown RBP27.95■■■□□ 2.06
PABPC1-215ENST00000520804 KCNH5Q8NCM2 988 aa27.95■■■□□ 2.06
PABPC1-215ENST00000520804 LRP5O75197 1615 aa27.93■■■□□ 2.06
PABPC1-215ENST00000520804 MON2Q7Z3U7 1717 aa27.93■■■□□ 2.06
PABPC1-215ENST00000520804 ARHGEF25Q86VW2 580 aa27.93■■■□□ 2.06
PABPC1-215ENST00000520804 CAMKK2Q96RR4 588 aa27.93■■■□□ 2.06
PABPC1-215ENST00000520804 AXIN2Q9Y2T1 843 aa27.93■■■□□ 2.06
PABPC1-215ENST00000520804 APBA3O96018 575 aa27.92■■■□□ 2.06
PABPC1-215ENST00000520804 TOM1L2Q6ZVM7 507 aa27.91■■■□□ 2.06
PABPC1-215ENST00000520804 PARD3Q8TEW0 1356 aa27.9■■■□□ 2.06
PABPC1-215ENST00000520804 WDR17Q8IZU2 1322 aa27.9■■■□□ 2.06
PABPC1-215ENST00000520804 NFAT5O94916 1531 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms