RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 WASF2Q9Y6W5 498 aa7.34□□□□□ -1.23
TRAPPC13-212ENST00000520525 ZFP42Q96MM3 310 aa7.33□□□□□ -1.24
TRAPPC13-212ENST00000520525 C6orf229H3BNL8 230 aa7.32□□□□□ -1.24
TRAPPC13-212ENST00000520525 SH3BP2P78314 561 aa7.32□□□□□ -1.24
TRAPPC13-212ENST00000520525 NUDT12Q9BQG2 462 aa7.32□□□□□ -1.24
TRAPPC13-212ENST00000520525 RSBN1LQ6PCB5 846 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC13-212ENST00000520525 GJA5P36382 358 aa7.3□□□□□ -1.24
TRAPPC13-212ENST00000520525 SPTLC1O15269 473 aa7.29□□□□□ -1.24
TRAPPC13-212ENST00000520525 MTMR2Q13614 643 aa7.29□□□□□ -1.24
TRAPPC13-212ENST00000520525 PCDHB15Q9Y5E8 787 aa7.29□□□□□ -1.24
TRAPPC13-212ENST00000520525 DIXDC1Q155Q3 683 aa7.28□□□□□ -1.24
TRAPPC13-212ENST00000520525 PRR7Q8TB68 274 aa7.28□□□□□ -1.24
TRAPPC13-212ENST00000520525 SUZ12Q15022 739 aaKnown RBP7.27□□□□□ -1.25
TRAPPC13-212ENST00000520525 CCNYL3P0C7X3 344 aa7.26□□□□□ -1.25
TRAPPC13-212ENST00000520525 VSIG8P0DPA2 414 aa7.26□□□□□ -1.25
TRAPPC13-212ENST00000520525 HRCP23327 699 aa7.26□□□□□ -1.25
TRAPPC13-212ENST00000520525 PTPRNQ16849 979 aa7.26□□□□□ -1.25
TRAPPC13-212ENST00000520525 MYSM1Q5VVJ2 828 aa7.26□□□□□ -1.25
TRAPPC13-212ENST00000520525 MRPL14Q6P1L8 145 aaKnown RBP7.26□□□□□ -1.25
TRAPPC13-212ENST00000520525 RIC3Q7Z5B4 369 aa7.26□□□□□ -1.25
TRAPPC13-212ENST00000520525 EVA1BQ9NVM1 165 aa7.26□□□□□ -1.25
TRAPPC13-212ENST00000520525 LIMD1Q9UGP4 676 aa7.26□□□□□ -1.25
TRAPPC13-212ENST00000520525 SPDYE5A6NIY4 337 aa7.25□□□□□ -1.25
TRAPPC13-212ENST00000520525 CFAP99D6REC4 459 aa7.25□□□□□ -1.25
TRAPPC13-212ENST00000520525 DESI1Q6ICB0 168 aa7.25□□□□□ -1.25
TRAPPC13-212ENST00000520525 MPNDQ8N594 471 aa7.25□□□□□ -1.25
TRAPPC13-212ENST00000520525 BAP1Q92560 729 aa7.25□□□□□ -1.25
TRAPPC13-212ENST00000520525 TLL2Q9Y6L7 1015 aa7.25□□□□□ -1.25
TRAPPC13-212ENST00000520525 SOBPA7XYQ1 873 aa7.24□□□□□ -1.25
TRAPPC13-212ENST00000520525 SCARF1Q14162 830 aa7.24□□□□□ -1.25
TRAPPC13-212ENST00000520525 CABLES1Q8TDN4 633 aa7.24□□□□□ -1.25
TRAPPC13-212ENST00000520525 PURBQ96QR8 312 aaKnown RBP7.24□□□□□ -1.25
TRAPPC13-212ENST00000520525 KLF16Q9BXK1 252 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC13-212ENST00000520525 UNC93B1Q9H1C4 597 aa7.24□□□□□ -1.25
TRAPPC13-212ENST00000520525 ZBTB3Q9H5J0 574 aa7.24□□□□□ -1.25
TRAPPC13-212ENST00000520525 PLEKHG3A1L390 1219 aa7.23□□□□□ -1.25
TRAPPC13-212ENST00000520525 TIMP2P16035 220 aa7.23□□□□□ -1.25
TRAPPC13-212ENST00000520525 VARSP26640 1264 aaKnown RBP7.23□□□□□ -1.25
TRAPPC13-212ENST00000520525 GSK3AP49840 483 aa7.23□□□□□ -1.25
TRAPPC13-212ENST00000520525 KCNMA1Q12791 1236 aa7.23□□□□□ -1.25
TRAPPC13-212ENST00000520525 NNTQ13423 1086 aa7.23□□□□□ -1.25
TRAPPC13-212ENST00000520525 QPCTQ16769 361 aa7.23□□□□□ -1.25
TRAPPC13-212ENST00000520525 LINC01559Q495D7 138 aa7.23□□□□□ -1.25
TRAPPC13-212ENST00000520525 PRPF38BQ5VTL8 546 aaKnown RBP7.23□□□□□ -1.25
TRAPPC13-212ENST00000520525 GPBP1L1Q9HC44 474 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC13-212ENST00000520525 WDR4P57081 412 aaKnown RBP7.22□□□□□ -1.25
TRAPPC13-212ENST00000520525 CSPP1Q1MSJ5 1256 aa7.22□□□□□ -1.25
TRAPPC13-212ENST00000520525 TUSC1Q2TAM9 212 aa7.22□□□□□ -1.25
TRAPPC13-212ENST00000520525 KCNH2Q12809 1159 aa7.21□□□□□ -1.26
TRAPPC13-212ENST00000520525 LYPD8Q6UX82 237 aa7.21□□□□□ -1.26
TRAPPC13-212ENST00000520525 ZNF511Q8NB15 262 aa7.21□□□□□ -1.26
TRAPPC13-212ENST00000520525 LILRB3O75022 631 aa7.2□□□□□ -1.26
TRAPPC13-212ENST00000520525 ADH1CP00326 375 aa7.2□□□□□ -1.26
TRAPPC13-212ENST00000520525 KCTD17Q8N5Z5 321 aa7.2□□□□□ -1.26
TRAPPC13-212ENST00000520525 KDM4CQ9H3R0 1056 aa7.2□□□□□ -1.26
TRAPPC13-212ENST00000520525 F12P00748 615 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC13-212ENST00000520525 CLK2P49760 499 aaKnown RBP7.19□□□□□ -1.26
TRAPPC13-212ENST00000520525 PER1O15534 1290 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC13-212ENST00000520525 FAM117AQ9C073 453 aa7.18□□□□□ -1.26
TRAPPC13-212ENST00000520525 MAP10Q9P2G4 905 aa7.18□□□□□ -1.26
TRAPPC13-212ENST00000520525 PPFIA3O75145 1194 aa7.17□□□□□ -1.26
TRAPPC13-212ENST00000520525 RTL5Q5HYW3 569 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-212ENST00000520525 FBXO31Q5XUX0 539 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-212ENST00000520525 CDK15Q96Q40 435 aa7.17□□□□□ -1.26
TRAPPC13-212ENST00000520525 POLR3EQ9NVU0 708 aa7.17□□□□□ -1.26
TRAPPC13-212ENST00000520525 NUTM2BA6NNL0 878 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-212ENST00000520525 NUTM2EB1AL46 878 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-212ENST00000520525 MAN1A2O60476 641 aa7.16□□□□□ -1.26
TRAPPC13-212ENST00000520525 NUTM2DQ5VT03 806 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-212ENST00000520525 NUTM2AQ8IVF1 878 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-212ENST00000520525 FAM174AQ8TBP5 190 aa7.16□□□□□ -1.26
TRAPPC13-212ENST00000520525 RSPH6AQ9H0K4 717 aa7.16□□□□□ -1.26
TRAPPC13-212ENST00000520525 ZFAND3Q9H8U3 227 aa7.16□□□□□ -1.26
TRAPPC13-212ENST00000520525 CTHP32929 405 aa7.15□□□□□ -1.26
TRAPPC13-212ENST00000520525 SH3D19Q5HYK7 790 aa7.15□□□□□ -1.26
TRAPPC13-212ENST00000520525 ZIC2O95409 532 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC13-212ENST00000520525 RASSF7Q02833 373 aa7.14□□□□□ -1.27
TRAPPC13-212ENST00000520525 C6orf118Q5T5N4 469 aa7.14□□□□□ -1.27
TRAPPC13-212ENST00000520525 TMEM151AQ8N4L1 468 aa7.14□□□□□ -1.27
TRAPPC13-212ENST00000520525 TSC1Q92574 1164 aa7.14□□□□□ -1.27
TRAPPC13-212ENST00000520525 ITPKCQ96DU7 683 aa7.14□□□□□ -1.27
TRAPPC13-212ENST00000520525 DDRGK1Q96HY6 314 aa7.14□□□□□ -1.27
TRAPPC13-212ENST00000520525 GRM5P41594 1212 aa7.13□□□□□ -1.27
TRAPPC13-212ENST00000520525 SKIV2LQ15477 1246 aaKnown RBP7.13□□□□□ -1.27
TRAPPC13-212ENST00000520525 FOXJ1Q92949 421 aa7.13□□□□□ -1.27
TRAPPC13-212ENST00000520525 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.13□□□□□ -1.27
TRAPPC13-212ENST00000520525 GDF11O95390 407 aa7.12□□□□□ -1.27
TRAPPC13-212ENST00000520525 NR3C2P08235 984 aa7.12□□□□□ -1.27
TRAPPC13-212ENST00000520525 KRT76Q01546 638 aa7.12□□□□□ -1.27
TRAPPC13-212ENST00000520525 ARID5BQ14865 1188 aa7.12□□□□□ -1.27
TRAPPC13-212ENST00000520525 GPR161Q8N6U8 529 aaKnown RBP7.12□□□□□ -1.27
TRAPPC13-212ENST00000520525 PROCA1Q8NCQ7 364 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC13-212ENST00000520525 HELBQ8NG08 1087 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC13-212ENST00000520525 ADAMTS8Q9UP79 889 aa7.12□□□□□ -1.27
TRAPPC13-212ENST00000520525 BMP2P12643 396 aa7.11□□□□□ -1.27
TRAPPC13-212ENST00000520525 NR5A1Q13285 461 aa7.11□□□□□ -1.27
TRAPPC13-212ENST00000520525 SOS2Q07890 1332 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC13-212ENST00000520525 C4orf48Q5BLP8 95 aa7.1□□□□□ -1.27
TRAPPC13-212ENST00000520525 DNMT3LQ9UJW3 386 aa7.1□□□□□ -1.27
TRAPPC13-212ENST00000520525 CTDSPL2Q05D32 466 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms