RNA–Protein interactions for RNA: ENST00000520102.1

CHMP7-208, Transcript of charged multivesicular body protein 7, humanhuman

TSL 4

Gene CHMP7, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-208ENST00000520102 ATP7BP35670 1465 aa11.51□□□□□ -0.57
CHMP7-208ENST00000520102 KRT27Q7Z3Y8 459 aa11.51□□□□□ -0.57
CHMP7-208ENST00000520102 NGDNQ8NEJ9 315 aaKnown RBP11.51□□□□□ -0.57
CHMP7-208ENST00000520102 ITSN1Q15811 1721 aa11.51□□□□□ -0.57
CHMP7-208ENST00000520102 A0A0G2JS52 829 aa11.5□□□□□ -0.57
CHMP7-208ENST00000520102 PAK3O75914 559 aaPredicted RBP11.5□□□□□ -0.57
CHMP7-208ENST00000520102 HRCP23327 699 aa11.5□□□□□ -0.57
CHMP7-208ENST00000520102 MYT1Q01538 1121 aa11.5□□□□□ -0.57
CHMP7-208ENST00000520102 FAM98CQ17RN3 349 aaKnown RBP11.5□□□□□ -0.57
CHMP7-208ENST00000520102 SF3B2Q13435 895 aaKnown RBP11.49□□□□□ -0.57
CHMP7-208ENST00000520102 NUDT16Q96DE0 195 aaKnown RBP11.48□□□□□ -0.57
CHMP7-208ENST00000520102 PHRF1Q9P1Y6 1649 aaKnown RBP11.48□□□□□ -0.57
CHMP7-208ENST00000520102 TOPAZ1Q8N9V7 1692 aa11.48□□□□□ -0.57
CHMP7-208ENST00000520102 SPATA31A5Q5VU36 1347 aa11.47□□□□□ -0.57
CHMP7-208ENST00000520102 SPATA31A7Q8IWB4 1347 aa11.47□□□□□ -0.57
CHMP7-208ENST00000520102 PRDM11Q9NQV5 511 aa11.47□□□□□ -0.57
CHMP7-208ENST00000520102 KIAA1210Q9ULL0 1709 aa11.46□□□□□ -0.57
CHMP7-208ENST00000520102 THSD7AQ9UPZ6 1657 aa11.46□□□□□ -0.57
CHMP7-208ENST00000520102 KIAA0232Q92628 1395 aa11.46□□□□□ -0.57
CHMP7-208ENST00000520102 FAM182BQ5T319 152 aa11.46□□□□□ -0.57
CHMP7-208ENST00000520102 CDK19Q9BWU1 502 aa11.46□□□□□ -0.57
CHMP7-208ENST00000520102 POLR3AO14802 1390 aaPredicted RBP11.45□□□□□ -0.58
CHMP7-208ENST00000520102 CHRNA2Q15822 529 aa11.45□□□□□ -0.58
CHMP7-208ENST00000520102 RGPD1P0DJD0 1748 aa11.44□□□□□ -0.58
CHMP7-208ENST00000520102 ACEP12821 1306 aa11.44□□□□□ -0.58
CHMP7-208ENST00000520102 BAG6P46379 1132 aa11.44□□□□□ -0.58
CHMP7-208ENST00000520102 NBPF1Q3BBV0 1214 aa11.44□□□□□ -0.58
CHMP7-208ENST00000520102 NUTM2GQ5VZR2 741 aa11.44□□□□□ -0.58
CHMP7-208ENST00000520102 SPATA31A1Q5TZJ5 1347 aa11.43□□□□□ -0.58
CHMP7-208ENST00000520102 NRKQ7Z2Y5 1582 aa11.43□□□□□ -0.58
CHMP7-208ENST00000520102 ZC3H6P61129 1189 aaKnown RBP11.43□□□□□ -0.58
CHMP7-208ENST00000520102 NBPF8Q3BBV2 869 aa11.43□□□□□ -0.58
CHMP7-208ENST00000520102 CCDC61Q9Y6R9 512 aa11.43□□□□□ -0.58
CHMP7-208ENST00000520102 PLEKHG3A1L390 1219 aa11.42□□□□□ -0.58
CHMP7-208ENST00000520102 STRN4Q9NRL3 753 aa11.42□□□□□ -0.58
CHMP7-208ENST00000520102 TNS1Q9HBL0 1735 aaKnown RBP11.42□□□□□ -0.58
CHMP7-208ENST00000520102 LRP5O75197 1615 aa11.42□□□□□ -0.58
CHMP7-208ENST00000520102 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
CHMP7-208ENST00000520102 EN1Q05925 392 aaPredicted RBP11.41□□□□□ -0.58
CHMP7-208ENST00000520102 LMO7Q8WWI1 1683 aa11.4□□□□□ -0.58
CHMP7-208ENST00000520102 CAMTA1Q9Y6Y1 1673 aa11.4□□□□□ -0.58
CHMP7-208ENST00000520102 ABTB2Q8N961 1025 aa11.4□□□□□ -0.58
CHMP7-208ENST00000520102 USP35Q9P2H5 1018 aa11.4□□□□□ -0.58
CHMP7-208ENST00000520102 DISP2A7MBM2 1401 aa11.4□□□□□ -0.58
CHMP7-208ENST00000520102 PPIP5K1Q6PFW1 1433 aa11.4□□□□□ -0.58
CHMP7-208ENST00000520102 SSH2Q76I76 1423 aa11.4□□□□□ -0.58
CHMP7-208ENST00000520102 QRICH2Q9H0J4 1663 aa11.4□□□□□ -0.59
CHMP7-208ENST00000520102 USP19O94966 1318 aa11.39□□□□□ -0.59
CHMP7-208ENST00000520102 CENPJQ9HC77 1338 aaPredicted RBP11.39□□□□□ -0.59
CHMP7-208ENST00000520102 SRPK2P78362 688 aaKnown RBP11.39□□□□□ -0.59
CHMP7-208ENST00000520102 CABP2Q9NPB3 220 aa11.39□□□□□ -0.59
CHMP7-208ENST00000520102 EVA1CP58658 441 aa11.38□□□□□ -0.59
CHMP7-208ENST00000520102 LARP1Q6PKG0 1096 aaKnown RBP11.38□□□□□ -0.59
CHMP7-208ENST00000520102 CPDO75976 1380 aa11.38□□□□□ -0.59
CHMP7-208ENST00000520102 TRIM37O94972 964 aa11.37□□□□□ -0.59
CHMP7-208ENST00000520102 EZH2Q15910 746 aaKnown RBP11.37□□□□□ -0.59
CHMP7-208ENST00000520102 FAM196AQ6ZSG2 479 aa11.37□□□□□ -0.59
CHMP7-208ENST00000520102 BARGINQ6ZT62 677 aa11.37□□□□□ -0.59
CHMP7-208ENST00000520102 GCP02774 474 aa11.36□□□□□ -0.59
CHMP7-208ENST00000520102 NLRP13Q86W25 1043 aa11.36□□□□□ -0.59
CHMP7-208ENST00000520102 COL5A2P05997 1499 aaPredicted RBP11.36□□□□□ -0.59
CHMP7-208ENST00000520102 USP6P35125 1406 aa11.35□□□□□ -0.59
CHMP7-208ENST00000520102 R3HDM1Q15032 1099 aaKnown RBP11.35□□□□□ -0.59
CHMP7-208ENST00000520102 TCP11L2Q8N4U5 519 aa11.35□□□□□ -0.59
CHMP7-208ENST00000520102 L3MBTL2Q969R5 705 aa11.35□□□□□ -0.59
CHMP7-208ENST00000520102 CAMKK2Q96RR4 588 aa11.35□□□□□ -0.59
CHMP7-208ENST00000520102 CABP1Q9NZU7 370 aa11.35□□□□□ -0.59
CHMP7-208ENST00000520102 TRPM1Q7Z4N2 1603 aa11.35□□□□□ -0.59
CHMP7-208ENST00000520102 BRD4O60885 1362 aaPredicted RBP11.34□□□□□ -0.59
CHMP7-208ENST00000520102 PDE3BQ13370 1112 aa11.34□□□□□ -0.59
CHMP7-208ENST00000520102 SLIT3O75094 1523 aa11.34□□□□□ -0.59
CHMP7-208ENST00000520102 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
CHMP7-208ENST00000520102 RREB1Q92766 1687 aa11.33□□□□□ -0.6
CHMP7-208ENST00000520102 PARP4Q9UKK3 1724 aaKnown RBP11.33□□□□□ -0.6
CHMP7-208ENST00000520102 APBA3O96018 575 aa11.33□□□□□ -0.6
CHMP7-208ENST00000520102 NLRP6P59044 892 aa11.33□□□□□ -0.6
CHMP7-208ENST00000520102 THRAP3Q9Y2W1 955 aaKnown RBP11.33□□□□□ -0.6
CHMP7-208ENST00000520102 PARD3Q8TEW0 1356 aa11.32□□□□□ -0.6
CHMP7-208ENST00000520102 ZBTB7CA1YPR0 619 aa11.32□□□□□ -0.6
CHMP7-208ENST00000520102 SIN3AQ96ST3 1273 aa11.32□□□□□ -0.6
CHMP7-208ENST00000520102 CRB1P82279 1406 aa11.32□□□□□ -0.6
CHMP7-208ENST00000520102 NUP188Q5SRE5 1749 aa11.32□□□□□ -0.6
CHMP7-208ENST00000520102 EVC2Q86UK5 1308 aa11.31□□□□□ -0.6
CHMP7-208ENST00000520102 LRRC37A3O60309 1634 aa11.31□□□□□ -0.6
CHMP7-208ENST00000520102 COL18A1P39060 1754 aa11.31□□□□□ -0.6
CHMP7-208ENST00000520102 AATKQ6ZMQ8 1374 aa11.3□□□□□ -0.6
CHMP7-208ENST00000520102 PEAK1Q9H792 1746 aa11.3□□□□□ -0.6
CHMP7-208ENST00000520102 AKAP12Q02952 1782 aa11.3□□□□□ -0.6
CHMP7-208ENST00000520102 ROCK2O75116 1388 aaKnown RBP11.29□□□□□ -0.6
CHMP7-208ENST00000520102 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
CHMP7-208ENST00000520102 WNK3Q9BYP7 1800 aa11.28□□□□□ -0.6
CHMP7-208ENST00000520102 OVOS2A0A0G2JMS6 1433 aa11.28□□□□□ -0.6
CHMP7-208ENST00000520102 OVOS2A0A0J9YW53 1432 aa11.28□□□□□ -0.6
CHMP7-208ENST00000520102 CPSF1Q10570 1443 aaKnown RBP11.28□□□□□ -0.6
CHMP7-208ENST00000520102 OVOS2Q6IE36 1432 aa11.28□□□□□ -0.6
CHMP7-208ENST00000520102 TOM1L2Q6ZVM7 507 aa11.28□□□□□ -0.6
CHMP7-208ENST00000520102 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
CHMP7-208ENST00000520102 TTC21BQ7Z4L5 1316 aa11.28□□□□□ -0.6
CHMP7-208ENST00000520102 RGPD5Q99666 1765 aa11.27□□□□□ -0.61
CHMP7-208ENST00000520102 SBF2Q86WG5 1849 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms