RNA–Protein interactions for RNA: ENST00000519560.5

SLIT3-206, Transcript of slit guidance ligand 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLIT3, Length 9,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-206ENST00000519560 LRRC9Q6ZRR7 1453 aa16.4■□□□□ 0.22
SLIT3-206ENST00000519560 CCDC181Q5TID7 509 aa16.39■□□□□ 0.21
SLIT3-206ENST00000519560 SUPT6HQ7KZ85 1726 aaKnown RBP16.39■□□□□ 0.21
SLIT3-206ENST00000519560 BRPF1P55201 1214 aaPredicted RBP16.39■□□□□ 0.21
SLIT3-206ENST00000519560 WASHC4Q2M389 1173 aa16.39■□□□□ 0.21
SLIT3-206ENST00000519560 TAF3Q5VWG9 929 aa16.39■□□□□ 0.21
SLIT3-206ENST00000519560 FYB1O15117 783 aa16.39■□□□□ 0.21
SLIT3-206ENST00000519560 STIM1Q13586 685 aa16.39■□□□□ 0.21
SLIT3-206ENST00000519560 SLC3A2P08195 630 aaKnown RBP16.38■□□□□ 0.21
SLIT3-206ENST00000519560 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
SLIT3-206ENST00000519560 KRT18P05783 430 aaKnown RBP16.38■□□□□ 0.21
SLIT3-206ENST00000519560 ST20-MTHFSA0A0A6YYL1 179 aa16.38■□□□□ 0.21
SLIT3-206ENST00000519560 IKQ13123 557 aaPredicted RBP16.38■□□□□ 0.21
SLIT3-206ENST00000519560 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
SLIT3-206ENST00000519560 JMYQ8N9B5 988 aa16.38■□□□□ 0.21
SLIT3-206ENST00000519560 RIPK4P57078 832 aa16.37■□□□□ 0.21
SLIT3-206ENST00000519560 PPFIBP1Q86W92 1011 aa16.37■□□□□ 0.21
SLIT3-206ENST00000519560 CLASRPQ8N2M8 674 aaKnown RBP16.37■□□□□ 0.21
SLIT3-206ENST00000519560 DEF6Q9H4E7 631 aa16.37■□□□□ 0.21
SLIT3-206ENST00000519560 STK11IPQ8N1F8 1099 aa16.37■□□□□ 0.21
SLIT3-206ENST00000519560 FMNL2Q96PY5 1086 aa16.36■□□□□ 0.21
SLIT3-206ENST00000519560 CCDC192P0DO97 292 aa16.36■□□□□ 0.21
SLIT3-206ENST00000519560 MCM2P49736 904 aa16.36■□□□□ 0.21
SLIT3-206ENST00000519560 NEUROD6Q96NK8 337 aa16.36■□□□□ 0.21
SLIT3-206ENST00000519560 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
SLIT3-206ENST00000519560 SPC24Q8NBT2 197 aa16.36■□□□□ 0.21
SLIT3-206ENST00000519560 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
SLIT3-206ENST00000519560 TRAK2O60296 914 aa16.36■□□□□ 0.21
SLIT3-206ENST00000519560 BRD4O60885 1362 aaPredicted RBP16.36■□□□□ 0.21
SLIT3-206ENST00000519560 DIAPH1O60610 1272 aaKnown RBP16.36■□□□□ 0.21
SLIT3-206ENST00000519560 HIP1O00291 1037 aa16.35■□□□□ 0.21
SLIT3-206ENST00000519560 SERPINC1P01008 464 aa16.35■□□□□ 0.21
SLIT3-206ENST00000519560 SCAPERQ9BY12 1400 aa16.35■□□□□ 0.21
SLIT3-206ENST00000519560 TAX1BP1Q86VP1 789 aa16.35■□□□□ 0.21
SLIT3-206ENST00000519560 CCDC112Q8NEF3 446 aa16.35■□□□□ 0.21
SLIT3-206ENST00000519560 LRRCC1Q9C099 1032 aa16.35■□□□□ 0.21
SLIT3-206ENST00000519560 DACH1Q9UI36 760 aa16.34■□□□□ 0.21
SLIT3-206ENST00000519560 TBC1D2BQ9UPU7 963 aa16.34■□□□□ 0.21
SLIT3-206ENST00000519560 FSD1Q9BTV5 496 aa16.34■□□□□ 0.21
SLIT3-206ENST00000519560 WASHC2AQ641Q2 1341 aa16.34■□□□□ 0.21
SLIT3-206ENST00000519560 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
SLIT3-206ENST00000519560 UBTFL1P0CB47 393 aaPredicted RBP16.34■□□□□ 0.21
SLIT3-206ENST00000519560 EHBP1L1Q8N3D4 1523 aa16.33■□□□□ 0.2
SLIT3-206ENST00000519560 GNAI1P63096 354 aa16.33■□□□□ 0.2
SLIT3-206ENST00000519560 RUNDC1Q96C34 613 aa16.33■□□□□ 0.2
SLIT3-206ENST00000519560 SLC26A8Q96RN1 970 aa16.33■□□□□ 0.2
SLIT3-206ENST00000519560 APAF1O14727 1248 aa16.32■□□□□ 0.2
SLIT3-206ENST00000519560 STK38Q15208 465 aa16.32■□□□□ 0.2
SLIT3-206ENST00000519560 TSPYL4Q9UJ04 414 aa16.32■□□□□ 0.2
SLIT3-206ENST00000519560 FAM193AP78312 1265 aa16.31■□□□□ 0.2
SLIT3-206ENST00000519560 RBM10P98175 930 aaKnown RBP16.31■□□□□ 0.2
SLIT3-206ENST00000519560 FIBPO43427 364 aa16.31■□□□□ 0.2
SLIT3-206ENST00000519560 CBFA2T2O43439 604 aa16.31■□□□□ 0.2
SLIT3-206ENST00000519560 CCDC7Q96M83 1385 aa16.31■□□□□ 0.2
SLIT3-206ENST00000519560 TNMDQ9H2S6 317 aa16.31■□□□□ 0.2
SLIT3-206ENST00000519560 DESP17661 470 aa16.31■□□□□ 0.2
SLIT3-206ENST00000519560 RIC3Q7Z5B4 369 aa16.3■□□□□ 0.2
SLIT3-206ENST00000519560 MTMR7Q9Y216 660 aa16.3■□□□□ 0.2
SLIT3-206ENST00000519560 HNRNPMP52272 730 aaKnown RBP eCLIP16.3■□□□□ 0.2
SLIT3-206ENST00000519560 PDCL3Q9H2J4 239 aa16.3■□□□□ 0.2
SLIT3-206ENST00000519560 VGFO15240 615 aaPredicted RBP16.29■□□□□ 0.2
SLIT3-206ENST00000519560 UQCRHLA0A096LP55 91 aa16.29■□□□□ 0.2
SLIT3-206ENST00000519560 UQCRHP07919 91 aa16.29■□□□□ 0.2
SLIT3-206ENST00000519560 PRPF40AO75400 957 aaKnown RBP16.29■□□□□ 0.2
SLIT3-206ENST00000519560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.29■□□□□ 0.2
SLIT3-206ENST00000519560 GIMAP7Q8NHV1 300 aa16.29■□□□□ 0.2
SLIT3-206ENST00000519560 CCDC91Q7Z6B0 441 aa16.29■□□□□ 0.2
SLIT3-206ENST00000519560 HECW1Q76N89 1606 aa16.28■□□□□ 0.2
SLIT3-206ENST00000519560 TIAM1Q13009 1591 aa16.28■□□□□ 0.2
SLIT3-206ENST00000519560 ATP2B1P20020 1258 aa16.27■□□□□ 0.2
SLIT3-206ENST00000519560 CEBPZQ03701 1054 aaKnown RBP16.27■□□□□ 0.2
SLIT3-206ENST00000519560 LRRFIP2Q9Y608 721 aaKnown RBP16.27■□□□□ 0.2
SLIT3-206ENST00000519560 FANCD2Q9BXW9 1451 aa16.27■□□□□ 0.2
SLIT3-206ENST00000519560 KDM4AO75164 1064 aa16.27■□□□□ 0.2
SLIT3-206ENST00000519560 MEX3CQ5U5Q3 659 aaKnown RBP16.27■□□□□ 0.2
SLIT3-206ENST00000519560 MINK1Q8N4C8 1332 aaPredicted RBP16.27■□□□□ 0.2
SLIT3-206ENST00000519560 ME1P48163 572 aa16.27■□□□□ 0.2
SLIT3-206ENST00000519560 ANKRD1Q15327 319 aa16.27■□□□□ 0.19
SLIT3-206ENST00000519560 NEK4P51957 841 aa16.27■□□□□ 0.19
SLIT3-206ENST00000519560 PSME1Q06323 249 aa16.27■□□□□ 0.19
SLIT3-206ENST00000519560 CCDC102AQ96A19 550 aa16.27■□□□□ 0.19
SLIT3-206ENST00000519560 TRIM22Q8IYM9 498 aa16.26■□□□□ 0.19
SLIT3-206ENST00000519560 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
SLIT3-206ENST00000519560 TANGO6Q9C0B7 1094 aa16.26■□□□□ 0.19
SLIT3-206ENST00000519560 RRP9O43818 475 aaKnown RBP16.26■□□□□ 0.19
SLIT3-206ENST00000519560 AEBP1Q8IUX7 1158 aa16.26■□□□□ 0.19
SLIT3-206ENST00000519560 BRPF3Q9ULD4 1205 aa16.26■□□□□ 0.19
SLIT3-206ENST00000519560 ERICH4A6NGS2 130 aa16.25■□□□□ 0.19
SLIT3-206ENST00000519560 SEPT11Q9NVA2 429 aaKnown RBP16.25■□□□□ 0.19
SLIT3-206ENST00000519560 DHX37Q8IY37 1157 aaKnown RBP16.25■□□□□ 0.19
SLIT3-206ENST00000519560 FAM177A1Q8N128 213 aaPredicted RBP16.25■□□□□ 0.19
SLIT3-206ENST00000519560 ERC1Q8IUD2 1116 aa16.24■□□□□ 0.19
SLIT3-206ENST00000519560 JAKMIP3Q5VZ66 844 aa16.24■□□□□ 0.19
SLIT3-206ENST00000519560 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.24■□□□□ 0.19
SLIT3-206ENST00000519560 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.24■□□□□ 0.19
SLIT3-206ENST00000519560 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
SLIT3-206ENST00000519560 DNAJC2Q99543 621 aaKnown RBP16.24■□□□□ 0.19
SLIT3-206ENST00000519560 MAP3K1Q13233 1512 aa16.23■□□□□ 0.19
SLIT3-206ENST00000519560 AIMP1Q12904 312 aaKnown RBP16.23■□□□□ 0.19
SLIT3-206ENST00000519560 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms