RNA–Protein interactions for RNA: ENST00000519542.1

GABRA1-205, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 3

Gene GABRA1, Length 572 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-205ENST00000519542 LYPD8Q6UX82 237 aa7.15□□□□□ -1.26
GABRA1-205ENST00000519542 SLC24A3Q9HC58 644 aa7.15□□□□□ -1.26
GABRA1-205ENST00000519542 TUSC1Q2TAM9 212 aa7.14□□□□□ -1.27
GABRA1-205ENST00000519542 PRPF38BQ5VTL8 546 aaKnown RBP7.14□□□□□ -1.27
GABRA1-205ENST00000519542 RIC3Q7Z5B4 369 aa7.14□□□□□ -1.27
GABRA1-205ENST00000519542 MYSM1Q5VVJ2 828 aa7.13□□□□□ -1.27
GABRA1-205ENST00000519542 CABLES1Q8TDN4 633 aa7.13□□□□□ -1.27
GABRA1-205ENST00000519542 ZBTB3Q9H5J0 574 aa7.13□□□□□ -1.27
GABRA1-205ENST00000519542 ATP13A2Q9NQ11 1180 aa7.13□□□□□ -1.27
GABRA1-205ENST00000519542 LIMD1Q9UGP4 676 aa7.13□□□□□ -1.27
GABRA1-205ENST00000519542 F12P00748 615 aaPredicted RBP7.12□□□□□ -1.27
GABRA1-205ENST00000519542 LINC01559Q495D7 138 aa7.12□□□□□ -1.27
GABRA1-205ENST00000519542 EHBP1Q8NDI1 1231 aa7.12□□□□□ -1.27
GABRA1-205ENST00000519542 BAP1Q92560 729 aa7.12□□□□□ -1.27
GABRA1-205ENST00000519542 ALDH1A1P00352 501 aa7.11□□□□□ -1.27
GABRA1-205ENST00000519542 ZNF511Q8NB15 262 aa7.11□□□□□ -1.27
GABRA1-205ENST00000519542 C11orf95C9JLR9 678 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-205ENST00000519542 LILRB3O75022 631 aa7.1□□□□□ -1.27
GABRA1-205ENST00000519542 QPCTQ16769 361 aa7.1□□□□□ -1.27
GABRA1-205ENST00000519542 MPNDQ8N594 471 aa7.1□□□□□ -1.27
GABRA1-205ENST00000519542 PER1O15534 1290 aaPredicted RBP7.09□□□□□ -1.27
GABRA1-205ENST00000519542 TREML4Q6UXN2 200 aa7.09□□□□□ -1.27
GABRA1-205ENST00000519542 TRIM47Q96LD4 638 aa7.09□□□□□ -1.27
GABRA1-205ENST00000519542 MAP10Q9P2G4 905 aa7.09□□□□□ -1.27
GABRA1-205ENST00000519542 SHROOM4Q9ULL8 1493 aa7.09□□□□□ -1.27
GABRA1-205ENST00000519542 SNRPBP14678 240 aaKnown RBP7.08□□□□□ -1.28
GABRA1-205ENST00000519542 HOMEZQ8IX15 550 aa7.08□□□□□ -1.28
GABRA1-205ENST00000519542 SCRIBQ14160 1630 aa7.08□□□□□ -1.28
GABRA1-205ENST00000519542 VARSP26640 1264 aaKnown RBP7.07□□□□□ -1.28
GABRA1-205ENST00000519542 CSPP1Q1MSJ5 1256 aa7.07□□□□□ -1.28
GABRA1-205ENST00000519542 TLL2Q9Y6L7 1015 aa7.07□□□□□ -1.28
GABRA1-205ENST00000519542 CTHP32929 405 aa7.06□□□□□ -1.28
GABRA1-205ENST00000519542 RTL5Q5HYW3 569 aaPredicted RBP7.06□□□□□ -1.28
GABRA1-205ENST00000519542 FOXJ1Q92949 421 aa7.06□□□□□ -1.28
GABRA1-205ENST00000519542 SENP2Q9HC62 589 aa7.06□□□□□ -1.28
GABRA1-205ENST00000519542 CLK2P49760 499 aaKnown RBP7.05□□□□□ -1.28
GABRA1-205ENST00000519542 NFX1Q12986 1120 aaKnown RBP7.05□□□□□ -1.28
GABRA1-205ENST00000519542 C4orf48Q5BLP8 95 aa7.05□□□□□ -1.28
GABRA1-205ENST00000519542 TRIM46Q7Z4K8 759 aa7.05□□□□□ -1.28
GABRA1-205ENST00000519542 WASF2Q9Y6W5 498 aa7.05□□□□□ -1.28
GABRA1-205ENST00000519542 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
GABRA1-205ENST00000519542 CDK15Q96Q40 435 aa7.04□□□□□ -1.28
GABRA1-205ENST00000519542 CAPN5O15484 640 aaPredicted RBP7.03□□□□□ -1.28
GABRA1-205ENST00000519542 TMEM132AQ24JP5 1023 aa7.03□□□□□ -1.28
GABRA1-205ENST00000519542 KIFC2Q96AC6 838 aa7.03□□□□□ -1.28
GABRA1-205ENST00000519542 KLF16Q9BXK1 252 aaPredicted RBP7.03□□□□□ -1.28
GABRA1-205ENST00000519542 RSPH6AQ9H0K4 717 aa7.03□□□□□ -1.28
GABRA1-205ENST00000519542 PLEKHG3A1L390 1219 aa7.02□□□□□ -1.29
GABRA1-205ENST00000519542 NUTM2BA6NNL0 878 aaPredicted RBP7.02□□□□□ -1.29
GABRA1-205ENST00000519542 NUTM2EB1AL46 878 aaPredicted RBP7.02□□□□□ -1.29
GABRA1-205ENST00000519542 WFS1O76024 890 aa7.02□□□□□ -1.29
GABRA1-205ENST00000519542 BMP1P13497 986 aa7.02□□□□□ -1.29
GABRA1-205ENST00000519542 NNTQ13423 1086 aa7.02□□□□□ -1.29
GABRA1-205ENST00000519542 NUTM2DQ5VT03 806 aaPredicted RBP7.02□□□□□ -1.29
GABRA1-205ENST00000519542 FBXO31Q5XUX0 539 aaPredicted RBP7.02□□□□□ -1.29
GABRA1-205ENST00000519542 NUTM2AQ8IVF1 878 aaPredicted RBP7.02□□□□□ -1.29
GABRA1-205ENST00000519542 FAM174AQ8TBP5 190 aa7.02□□□□□ -1.29
GABRA1-205ENST00000519542 TIMP2P16035 220 aa7.01□□□□□ -1.29
GABRA1-205ENST00000519542 SH3RF1Q7Z6J0 888 aa7.01□□□□□ -1.29
GABRA1-205ENST00000519542 C1QTNF2Q9BXJ5 285 aa7.01□□□□□ -1.29
GABRA1-205ENST00000519542 POLR3EQ9NVU0 708 aa7.01□□□□□ -1.29
GABRA1-205ENST00000519542 ADH1CP00326 375 aa7□□□□□ -1.29
GABRA1-205ENST00000519542 C14orf37Q86TY3 774 aa7□□□□□ -1.29
GABRA1-205ENST00000519542 HELBQ8NG08 1087 aaPredicted RBP7□□□□□ -1.29
GABRA1-205ENST00000519542 TSC1Q92574 1164 aa7□□□□□ -1.29
GABRA1-205ENST00000519542 KDM4CQ9H3R0 1056 aa7□□□□□ -1.29
GABRA1-205ENST00000519542 GPBP1L1Q9HC44 474 aaPredicted RBP7□□□□□ -1.29
GABRA1-205ENST00000519542 TERTO14746 1132 aaKnown RBP6.99□□□□□ -1.29
GABRA1-205ENST00000519542 GRM5P41594 1212 aa6.99□□□□□ -1.29
GABRA1-205ENST00000519542 SKIV2LQ15477 1246 aaKnown RBP6.99□□□□□ -1.29
GABRA1-205ENST00000519542 SH3D19Q5HYK7 790 aa6.99□□□□□ -1.29
GABRA1-205ENST00000519542 SH3BP5LQ7L8J4 393 aa6.99□□□□□ -1.29
GABRA1-205ENST00000519542 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.99□□□□□ -1.29
GABRA1-205ENST00000519542 EIF4G1Q04637 1599 aaKnown RBP6.99□□□□□ -1.29
GABRA1-205ENST00000519542 WIPF1O43516 503 aa6.98□□□□□ -1.29
GABRA1-205ENST00000519542 CTDSPL2Q05D32 466 aa6.98□□□□□ -1.29
GABRA1-205ENST00000519542 BPHLQ86WA6 291 aaPredicted RBP6.98□□□□□ -1.29
GABRA1-205ENST00000519542 ARMC2Q8NEN0 867 aa6.98□□□□□ -1.29
GABRA1-205ENST00000519542 FAM117AQ9C073 453 aa6.98□□□□□ -1.29
GABRA1-205ENST00000519542 CC2D2AQ9P2K1 1620 aa6.98□□□□□ -1.29
GABRA1-205ENST00000519542 NR3C2P08235 984 aa6.97□□□□□ -1.29
GABRA1-205ENST00000519542 WDR4P57081 412 aaKnown RBP6.97□□□□□ -1.29
GABRA1-205ENST00000519542 PPP2R2DQ66LE6 453 aa6.97□□□□□ -1.29
GABRA1-205ENST00000519542 TRMT44Q8IYL2 757 aaKnown RBP6.97□□□□□ -1.29
GABRA1-205ENST00000519542 PROCA1Q8NCQ7 364 aaPredicted RBP6.97□□□□□ -1.29
GABRA1-205ENST00000519542 NR5A1Q13285 461 aa6.96□□□□□ -1.3
GABRA1-205ENST00000519542 NBPF14Q5TI25 921 aa6.96□□□□□ -1.3
GABRA1-205ENST00000519542 DDRGK1Q96HY6 314 aa6.96□□□□□ -1.3
GABRA1-205ENST00000519542 ZFP42Q96MM3 310 aa6.96□□□□□ -1.3
GABRA1-205ENST00000519542 MAP4K5Q9Y4K4 846 aa6.96□□□□□ -1.3
GABRA1-205ENST00000519542 MRPL14Q6P1L8 145 aaKnown RBP6.95□□□□□ -1.3
GABRA1-205ENST00000519542 GPKOWQ92917 476 aaPredicted RBP eCLIP6.95□□□□□ -1.3
GABRA1-205ENST00000519542 ZFAND3Q9H8U3 227 aa6.95□□□□□ -1.3
GABRA1-205ENST00000519542 ARID5BQ14865 1188 aa6.94□□□□□ -1.3
GABRA1-205ENST00000519542 AGERQ15109 404 aa6.94□□□□□ -1.3
GABRA1-205ENST00000519542 LRRN4Q8WUT4 740 aa6.94□□□□□ -1.3
GABRA1-205ENST00000519542 ITPKCQ96DU7 683 aa6.94□□□□□ -1.3
GABRA1-205ENST00000519542 ZIC2O95409 532 aaPredicted RBP6.93□□□□□ -1.3
GABRA1-205ENST00000519542 NPAS3Q8IXF0 933 aa6.93□□□□□ -1.3
GABRA1-205ENST00000519542 NXF1Q9UBU9 619 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms