RNA–Protein interactions for RNA: ENST00000519515.1

VPS37A-205, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-205ENST00000519515 QPCTQ16769 361 aa11.51□□□□□ -0.57
VPS37A-205ENST00000519515 ZNF511Q8NB15 262 aa11.51□□□□□ -0.57
VPS37A-205ENST00000519515 ATP13A2Q9NQ11 1180 aa11.51□□□□□ -0.57
VPS37A-205ENST00000519515 TSC1Q92574 1164 aa11.5□□□□□ -0.57
VPS37A-205ENST00000519515 WASF2Q9Y6W5 498 aa11.5□□□□□ -0.57
VPS37A-205ENST00000519515 TUSC1Q2TAM9 212 aa11.49□□□□□ -0.57
VPS37A-205ENST00000519515 BCANQ96GW7 911 aa11.49□□□□□ -0.57
VPS37A-205ENST00000519515 MAP10Q9P2G4 905 aa11.49□□□□□ -0.57
VPS37A-205ENST00000519515 PER1O15534 1290 aaPredicted RBP11.48□□□□□ -0.57
VPS37A-205ENST00000519515 LILRB3O75022 631 aa11.48□□□□□ -0.57
VPS37A-205ENST00000519515 F12P00748 615 aaPredicted RBP11.47□□□□□ -0.57
VPS37A-205ENST00000519515 RSPH6AQ9H0K4 717 aa11.47□□□□□ -0.57
VPS37A-205ENST00000519515 POLR3EQ9NVU0 708 aa11.47□□□□□ -0.57
VPS37A-205ENST00000519515 VARSP26640 1264 aaKnown RBP11.46□□□□□ -0.57
VPS37A-205ENST00000519515 CLK2P49760 499 aaKnown RBP11.46□□□□□ -0.57
VPS37A-205ENST00000519515 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
VPS37A-205ENST00000519515 TLL2Q9Y6L7 1015 aa11.45□□□□□ -0.58
VPS37A-205ENST00000519515 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
VPS37A-205ENST00000519515 FOXJ1Q92949 421 aa11.43□□□□□ -0.58
VPS37A-205ENST00000519515 SENP2Q9HC62 589 aa11.43□□□□□ -0.58
VPS37A-205ENST00000519515 SNRPBP14678 240 aaKnown RBP11.42□□□□□ -0.58
VPS37A-205ENST00000519515 GPBP1L1Q9HC44 474 aaPredicted RBP11.42□□□□□ -0.58
VPS37A-205ENST00000519515 CAPN5O15484 640 aaPredicted RBP11.41□□□□□ -0.58
VPS37A-205ENST00000519515 SLC24A1O60721 1099 aa11.41□□□□□ -0.58
VPS37A-205ENST00000519515 TREML4Q6UXN2 200 aa11.41□□□□□ -0.58
VPS37A-205ENST00000519515 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
VPS37A-205ENST00000519515 MPNDQ8N594 471 aa11.4□□□□□ -0.58
VPS37A-205ENST00000519515 HELBQ8NG08 1087 aaPredicted RBP11.4□□□□□ -0.58
VPS37A-205ENST00000519515 FAM174AQ8TBP5 190 aa11.4□□□□□ -0.58
VPS37A-205ENST00000519515 KDM4CQ9H3R0 1056 aa11.4□□□□□ -0.58
VPS37A-205ENST00000519515 AGERQ15109 404 aa11.39□□□□□ -0.59
VPS37A-205ENST00000519515 KIFC2Q96AC6 838 aa11.38□□□□□ -0.59
VPS37A-205ENST00000519515 NNTQ13423 1086 aa11.37□□□□□ -0.59
VPS37A-205ENST00000519515 FAM117AQ9C073 453 aa11.37□□□□□ -0.59
VPS37A-205ENST00000519515 BMP1P13497 986 aa11.36□□□□□ -0.59
VPS37A-205ENST00000519515 ARID5BQ14865 1188 aa11.36□□□□□ -0.59
VPS37A-205ENST00000519515 C4orf48Q5BLP8 95 aa11.36□□□□□ -0.59
VPS37A-205ENST00000519515 LCE2AQ5TA79 106 aaPredicted RBP11.36□□□□□ -0.59
VPS37A-205ENST00000519515 TRIM46Q7Z4K8 759 aa11.36□□□□□ -0.59
VPS37A-205ENST00000519515 CTDSPL2Q05D32 466 aa11.35□□□□□ -0.59
VPS37A-205ENST00000519515 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
VPS37A-205ENST00000519515 BPHLQ86WA6 291 aaPredicted RBP11.35□□□□□ -0.59
VPS37A-205ENST00000519515 ARMC2Q8NEN0 867 aa11.35□□□□□ -0.59
VPS37A-205ENST00000519515 ATP1B4Q9UN42 357 aaPredicted RBP11.35□□□□□ -0.59
VPS37A-205ENST00000519515 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
VPS37A-205ENST00000519515 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
VPS37A-205ENST00000519515 CDK15Q96Q40 435 aa11.34□□□□□ -0.59
VPS37A-205ENST00000519515 WFS1O76024 890 aa11.33□□□□□ -0.6
VPS37A-205ENST00000519515 ADH1CP00326 375 aa11.33□□□□□ -0.6
VPS37A-205ENST00000519515 SH3D19Q5HYK7 790 aa11.33□□□□□ -0.6
VPS37A-205ENST00000519515 WDR4P57081 412 aaKnown RBP11.32□□□□□ -0.6
VPS37A-205ENST00000519515 FBXO31Q5XUX0 539 aaPredicted RBP11.32□□□□□ -0.6
VPS37A-205ENST00000519515 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
VPS37A-205ENST00000519515 TIMP2P16035 220 aa11.3□□□□□ -0.6
VPS37A-205ENST00000519515 NBPF14Q5TI25 921 aa11.3□□□□□ -0.6
VPS37A-205ENST00000519515 GRM5P41594 1212 aa11.29□□□□□ -0.6
VPS37A-205ENST00000519515 SH3RF1Q7Z6J0 888 aa11.29□□□□□ -0.6
VPS37A-205ENST00000519515 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.29□□□□□ -0.6
VPS37A-205ENST00000519515 KLF16Q9BXK1 252 aaPredicted RBP11.29□□□□□ -0.6
VPS37A-205ENST00000519515 TERTO14746 1132 aaKnown RBP11.28□□□□□ -0.6
VPS37A-205ENST00000519515 SH3BP5LQ7L8J4 393 aa11.28□□□□□ -0.6
VPS37A-205ENST00000519515 LRRN4Q8WUT4 740 aa11.28□□□□□ -0.6
VPS37A-205ENST00000519515 ZFP42Q96MM3 310 aa11.28□□□□□ -0.6
VPS37A-205ENST00000519515 MAGEB6P1A0A0J9YX57 407 aa11.27□□□□□ -0.61
VPS37A-205ENST00000519515 NR5A1Q13285 461 aa11.27□□□□□ -0.61
VPS37A-205ENST00000519515 NR3C2P08235 984 aa11.26□□□□□ -0.61
VPS37A-205ENST00000519515 PPP2R2DQ66LE6 453 aa11.26□□□□□ -0.61
VPS37A-205ENST00000519515 MRPL14Q6P1L8 145 aaKnown RBP11.26□□□□□ -0.61
VPS37A-205ENST00000519515 C1QTNF2Q9BXJ5 285 aa11.26□□□□□ -0.61
VPS37A-205ENST00000519515 ZIC2O95409 532 aaPredicted RBP11.25□□□□□ -0.61
VPS37A-205ENST00000519515 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
VPS37A-205ENST00000519515 SCARF1Q14162 830 aa11.24□□□□□ -0.61
VPS37A-205ENST00000519515 GPKOWQ92917 476 aaPredicted RBP eCLIP11.24□□□□□ -0.61
VPS37A-205ENST00000519515 ITPKCQ96DU7 683 aa11.24□□□□□ -0.61
VPS37A-205ENST00000519515 PURBQ96QR8 312 aaKnown RBP11.24□□□□□ -0.61
VPS37A-205ENST00000519515 CARD14Q9BXL6 1004 aa11.24□□□□□ -0.61
VPS37A-205ENST00000519515 AP1G2O75843 785 aa11.23□□□□□ -0.61
VPS37A-205ENST00000519515 NR6A1Q15406 480 aa11.23□□□□□ -0.61
VPS37A-205ENST00000519515 VASH1Q7L8A9 365 aaPredicted RBP11.23□□□□□ -0.61
VPS37A-205ENST00000519515 TRMT44Q8IYL2 757 aaKnown RBP11.22□□□□□ -0.61
VPS37A-205ENST00000519515 FKBPLQ9UIM3 349 aa11.22□□□□□ -0.61
VPS37A-205ENST00000519515 FSHRP23945 695 aa11.21□□□□□ -0.61
VPS37A-205ENST00000519515 PDXDC2PQ6P474 469 aa11.21□□□□□ -0.61
VPS37A-205ENST00000519515 NXF1Q9UBU9 619 aaKnown RBP11.21□□□□□ -0.61
VPS37A-205ENST00000519515 MAP4K5Q9Y4K4 846 aa11.21□□□□□ -0.61
VPS37A-205ENST00000519515 ERFEQ4G0M1 354 aa11.2□□□□□ -0.62
VPS37A-205ENST00000519515 LCE2CQ5TA81 110 aa11.2□□□□□ -0.62
VPS37A-205ENST00000519515 ARHGAP9Q9BRR9 750 aa11.19□□□□□ -0.62
VPS37A-205ENST00000519515 SLC16A10Q8TF71 515 aa11.18□□□□□ -0.62
VPS37A-205ENST00000519515 C6orf118Q5T5N4 469 aa11.17□□□□□ -0.62
VPS37A-205ENST00000519515 WIPF1O43516 503 aa11.16□□□□□ -0.62
VPS37A-205ENST00000519515 VEGFBP49765 207 aa11.16□□□□□ -0.62
VPS37A-205ENST00000519515 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
VPS37A-205ENST00000519515 CCDC116Q8IYX3 515 aa11.16□□□□□ -0.62
VPS37A-205ENST00000519515 EPS8L1Q8TE68 723 aa11.16□□□□□ -0.62
VPS37A-205ENST00000519515 SOBPA7XYQ1 873 aa11.15□□□□□ -0.62
VPS37A-205ENST00000519515 RFC5P40937 340 aa11.15□□□□□ -0.62
VPS37A-205ENST00000519515 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
VPS37A-205ENST00000519515 ZC3H4Q9UPT8 1303 aaKnown RBP11.14□□□□□ -0.63
VPS37A-205ENST00000519515 UPP2O95045 317 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms