RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 MFAP1P55081 439 aaKnown RBP9.71□□□□□ -0.85
SLIT3-205ENST00000519486 AMER1Q5JTC6 1135 aaPredicted RBP9.71□□□□□ -0.85
SLIT3-205ENST00000519486 DIP2BQ9P265 1576 aa9.71□□□□□ -0.85
SLIT3-205ENST00000519486 GCC2Q8IWJ2 1684 aa9.71□□□□□ -0.86
SLIT3-205ENST00000519486 QTRT2Q9H974 415 aaKnown RBP9.71□□□□□ -0.86
SLIT3-205ENST00000519486 NPATQ14207 1427 aa9.71□□□□□ -0.86
SLIT3-205ENST00000519486 PRAG1Q86YV5 1406 aa9.7□□□□□ -0.86
SLIT3-205ENST00000519486 IPO8O15397 1037 aaKnown RBP9.7□□□□□ -0.86
SLIT3-205ENST00000519486 ITSN2Q9NZM3 1697 aa9.7□□□□□ -0.86
SLIT3-205ENST00000519486 ADGRF5Q8IZF2 1346 aa9.7□□□□□ -0.86
SLIT3-205ENST00000519486 SLFN5Q08AF3 891 aa9.7□□□□□ -0.86
SLIT3-205ENST00000519486 TMEM94Q12767 1356 aa9.7□□□□□ -0.86
SLIT3-205ENST00000519486 ATP7AQ04656 1500 aa9.69□□□□□ -0.86
SLIT3-205ENST00000519486 APBB1O00213 710 aa9.69□□□□□ -0.86
SLIT3-205ENST00000519486 NUTM2GQ5VZR2 741 aa9.69□□□□□ -0.86
SLIT3-205ENST00000519486 MAP7D2Q96T17 732 aa9.69□□□□□ -0.86
SLIT3-205ENST00000519486 DUOX2Q9NRD8 1548 aa9.69□□□□□ -0.86
SLIT3-205ENST00000519486 HSPA1LP34931 641 aa9.69□□□□□ -0.86
SLIT3-205ENST00000519486 DUSP27Q5VZP5 1158 aa9.69□□□□□ -0.86
SLIT3-205ENST00000519486 ZKSCAN2Q63HK3 967 aa9.69□□□□□ -0.86
SLIT3-205ENST00000519486 FAM13BQ9NYF5 915 aa9.69□□□□□ -0.86
SLIT3-205ENST00000519486 PARD3Q8TEW0 1356 aa9.68□□□□□ -0.86
SLIT3-205ENST00000519486 ADCY10Q96PN6 1610 aa9.68□□□□□ -0.86
SLIT3-205ENST00000519486 TATP17735 454 aaPredicted RBP9.68□□□□□ -0.86
SLIT3-205ENST00000519486 ZC3H6P61129 1189 aaKnown RBP9.68□□□□□ -0.86
SLIT3-205ENST00000519486 NGEFQ8N5V2 710 aa9.68□□□□□ -0.86
SLIT3-205ENST00000519486 PDCL3Q9H2J4 239 aa9.68□□□□□ -0.86
SLIT3-205ENST00000519486 EXOC5O00471 708 aa9.68□□□□□ -0.86
SLIT3-205ENST00000519486 CCDC61Q9Y6R9 512 aa9.68□□□□□ -0.86
SLIT3-205ENST00000519486 STK32BQ9NY57 414 aa9.67□□□□□ -0.86
SLIT3-205ENST00000519486 JCADQ9P266 1359 aa9.67□□□□□ -0.86
SLIT3-205ENST00000519486 TMEM2Q9UHN6 1383 aa9.67□□□□□ -0.86
SLIT3-205ENST00000519486 HSP90AB1P08238 724 aaKnown RBP9.67□□□□□ -0.86
SLIT3-205ENST00000519486 RIPK4P57078 832 aa9.67□□□□□ -0.86
SLIT3-205ENST00000519486 DNTTIP2Q5QJE6 756 aaKnown RBP9.67□□□□□ -0.86
SLIT3-205ENST00000519486 HSCBQ8IWL3 235 aa9.67□□□□□ -0.86
SLIT3-205ENST00000519486 TTC5Q8N0Z6 440 aa9.67□□□□□ -0.86
SLIT3-205ENST00000519486 ADGRL2O95490 1459 aa9.67□□□□□ -0.86
SLIT3-205ENST00000519486 RBM6P78332 1123 aaKnown RBP9.67□□□□□ -0.86
SLIT3-205ENST00000519486 DZIP1LQ8IYY4 767 aaKnown RBP9.67□□□□□ -0.86
SLIT3-205ENST00000519486 WWC1Q8IX03 1113 aa9.66□□□□□ -0.86
SLIT3-205ENST00000519486 TSR2Q969E8 191 aaKnown RBP9.66□□□□□ -0.86
SLIT3-205ENST00000519486 GOLGA6L22H0YM25 854 aa9.65□□□□□ -0.86
SLIT3-205ENST00000519486 CDCA7Q9BWT1 371 aaPredicted RBP9.65□□□□□ -0.86
SLIT3-205ENST00000519486 SPATA31A6Q5VVP1 1343 aa9.65□□□□□ -0.86
SLIT3-205ENST00000519486 DIAPH1O60610 1272 aaKnown RBP9.65□□□□□ -0.86
SLIT3-205ENST00000519486 PDE3AQ14432 1141 aa9.64□□□□□ -0.87
SLIT3-205ENST00000519486 CHMP4BQ9H444 224 aaKnown RBP9.64□□□□□ -0.87
SLIT3-205ENST00000519486 HMOX1P09601 288 aa9.64□□□□□ -0.87
SLIT3-205ENST00000519486 A2ML1A8K2U0 1454 aa9.64□□□□□ -0.87
SLIT3-205ENST00000519486 SCAF11Q99590 1463 aaKnown RBP9.64□□□□□ -0.87
SLIT3-205ENST00000519486 C16orf71Q8IYS4 520 aaPredicted RBP9.64□□□□□ -0.87
SLIT3-205ENST00000519486 EXOSC9Q06265 439 aaKnown RBP9.64□□□□□ -0.87
SLIT3-205ENST00000519486 ARHGEF12Q9NZN5 1544 aa9.64□□□□□ -0.87
SLIT3-205ENST00000519486 SHANK2Q9UPX8 1470 aa9.63□□□□□ -0.87
SLIT3-205ENST00000519486 TEFQ10587 303 aa9.63□□□□□ -0.87
SLIT3-205ENST00000519486 FOXD4L1Q9NU39 408 aa9.63□□□□□ -0.87
SLIT3-205ENST00000519486 RNF123Q5XPI4 1314 aa9.63□□□□□ -0.87
SLIT3-205ENST00000519486 PTPRTO14522 1441 aa9.63□□□□□ -0.87
SLIT3-205ENST00000519486 NSD3Q9BZ95 1437 aa9.63□□□□□ -0.87
SLIT3-205ENST00000519486 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.63□□□□□ -0.87
SLIT3-205ENST00000519486 UGGT1Q9NYU2 1555 aa9.63□□□□□ -0.87
SLIT3-205ENST00000519486 CLCN1P35523 988 aa9.63□□□□□ -0.87
SLIT3-205ENST00000519486 ARHGEF10O15013 1369 aa9.63□□□□□ -0.87
SLIT3-205ENST00000519486 ESPNB1AK53 854 aa9.62□□□□□ -0.87
SLIT3-205ENST00000519486 PDIA4P13667 645 aaKnown RBP9.62□□□□□ -0.87
SLIT3-205ENST00000519486 MRE11P49959 708 aa9.62□□□□□ -0.87
SLIT3-205ENST00000519486 CDK19Q9BWU1 502 aa9.62□□□□□ -0.87
SLIT3-205ENST00000519486 HECW2Q9P2P5 1572 aa9.62□□□□□ -0.87
SLIT3-205ENST00000519486 PTMAP06454 111 aaKnown RBP9.62□□□□□ -0.87
SLIT3-205ENST00000519486 ANKRD45Q5TZF3 282 aa9.62□□□□□ -0.87
SLIT3-205ENST00000519486 DDX54Q8TDD1 881 aaKnown RBP9.62□□□□□ -0.87
SLIT3-205ENST00000519486 NUDT16Q96DE0 195 aaKnown RBP9.62□□□□□ -0.87
SLIT3-205ENST00000519486 PDZRN3Q9UPQ7 1066 aa9.62□□□□□ -0.87
SLIT3-205ENST00000519486 PLEKHH1Q9ULM0 1364 aa9.62□□□□□ -0.87
SLIT3-205ENST00000519486 SHROOM2Q13796 1616 aa9.62□□□□□ -0.87
SLIT3-205ENST00000519486 MTERF4Q7Z6M4 381 aaKnown RBP9.62□□□□□ -0.87
SLIT3-205ENST00000519486 DDX19BQ9UMR2 479 aa9.62□□□□□ -0.87
SLIT3-205ENST00000519486 LRRIQ1Q96JM4 1722 aa9.62□□□□□ -0.87
SLIT3-205ENST00000519486 CALD1Q05682 793 aaKnown RBP9.61□□□□□ -0.87
SLIT3-205ENST00000519486 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.61□□□□□ -0.87
SLIT3-205ENST00000519486 LNPKQ9C0E8 428 aa9.61□□□□□ -0.87
SLIT3-205ENST00000519486 RRAGDQ9NQL2 400 aaPredicted RBP9.61□□□□□ -0.87
SLIT3-205ENST00000519486 DDB1Q16531 1140 aa9.61□□□□□ -0.87
SLIT3-205ENST00000519486 SPG7Q9UQ90 795 aa9.61□□□□□ -0.87
SLIT3-205ENST00000519486 TPRNQ4KMQ1 711 aa9.61□□□□□ -0.87
SLIT3-205ENST00000519486 SPINK5Q9NQ38 1064 aaPredicted RBP9.61□□□□□ -0.87
SLIT3-205ENST00000519486 BBXQ8WY36 941 aaPredicted RBP9.61□□□□□ -0.87
SLIT3-205ENST00000519486 FGD1P98174 961 aa9.6□□□□□ -0.87
SLIT3-205ENST00000519486 CASC1Q6TDU7 716 aa9.6□□□□□ -0.87
SLIT3-205ENST00000519486 CARD14Q9BXL6 1004 aa9.6□□□□□ -0.87
SLIT3-205ENST00000519486 ATAD2Q6PL18 1390 aa9.6□□□□□ -0.87
SLIT3-205ENST00000519486 KIAA1211Q6ZU35 1233 aa9.6□□□□□ -0.87
SLIT3-205ENST00000519486 MBD5Q9P267 1494 aa9.59□□□□□ -0.87
SLIT3-205ENST00000519486 CABP1Q9NZU7 370 aa9.59□□□□□ -0.87
SLIT3-205ENST00000519486 PIK3R4Q99570 1358 aa9.59□□□□□ -0.87
SLIT3-205ENST00000519486 IGHDP01880 384 aa9.59□□□□□ -0.87
SLIT3-205ENST00000519486 RARSP54136 660 aaKnown RBP9.59□□□□□ -0.87
SLIT3-205ENST00000519486 WAPLQ7Z5K2 1190 aa9.59□□□□□ -0.87
SLIT3-205ENST00000519486 NCBP3Q53F19 620 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms