RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ORAI2Q96SN7 254 aa19.5■□□□□ 0.71
CLN8-204ENST00000519254 POLR3AO14802 1390 aaPredicted RBP19.5■□□□□ 0.71
CLN8-204ENST00000519254 GGNBP2Q9H3C7 697 aa19.49■□□□□ 0.71
CLN8-204ENST00000519254 USP6P35125 1406 aa19.49■□□□□ 0.71
CLN8-204ENST00000519254 KIF20BQ96Q89 1820 aa19.49■□□□□ 0.71
CLN8-204ENST00000519254 LTBP4Q8N2S1 1624 aa19.48■□□□□ 0.71
CLN8-204ENST00000519254 ZBED9Q6R2W3 1325 aa19.48■□□□□ 0.71
CLN8-204ENST00000519254 NRKQ7Z2Y5 1582 aa19.47■□□□□ 0.71
CLN8-204ENST00000519254 MORC1Q86VD1 984 aa19.47■□□□□ 0.71
CLN8-204ENST00000519254 NSD2O96028 1365 aa19.47■□□□□ 0.71
CLN8-204ENST00000519254 TNNT2P45379 298 aaPredicted RBP19.47■□□□□ 0.71
CLN8-204ENST00000519254 FYB1O15117 783 aa19.46■□□□□ 0.71
CLN8-204ENST00000519254 PPP2R1AP30153 589 aa19.46■□□□□ 0.71
CLN8-204ENST00000519254 NME9Q86XW9 330 aa19.46■□□□□ 0.71
CLN8-204ENST00000519254 TTC21BQ7Z4L5 1316 aa19.44■□□□□ 0.7
CLN8-204ENST00000519254 KIF1AQ12756 1690 aa19.44■□□□□ 0.7
CLN8-204ENST00000519254 ANKRD26Q9UPS8 1709 aa19.43■□□□□ 0.7
CLN8-204ENST00000519254 FOXO3O43524 673 aa19.43■□□□□ 0.7
CLN8-204ENST00000519254 PSME1Q06323 249 aa19.43■□□□□ 0.7
CLN8-204ENST00000519254 PAK3O75914 559 aaPredicted RBP19.42■□□□□ 0.7
CLN8-204ENST00000519254 XPCQ01831 940 aaPredicted RBP19.42■□□□□ 0.7
CLN8-204ENST00000519254 ZRANB1Q9UGI0 708 aa19.42■□□□□ 0.7
CLN8-204ENST00000519254 SSH2Q76I76 1423 aa19.41■□□□□ 0.7
CLN8-204ENST00000519254 SLAIN2Q9P270 581 aa19.41■□□□□ 0.7
CLN8-204ENST00000519254 TTC21AQ8NDW8 1320 aa19.4■□□□□ 0.7
CLN8-204ENST00000519254 DDX17Q92841 729 aaKnown RBP19.39■□□□□ 0.69
CLN8-204ENST00000519254 COG3Q96JB2 828 aa19.39■□□□□ 0.69
CLN8-204ENST00000519254 INSRP06213 1382 aa19.38■□□□□ 0.69
CLN8-204ENST00000519254 BRINP3Q76B58 766 aa19.37■□□□□ 0.69
CLN8-204ENST00000519254 PIK3C2AO00443 1686 aa19.37■□□□□ 0.69
CLN8-204ENST00000519254 NUTM2GQ5VZR2 741 aa19.37■□□□□ 0.69
CLN8-204ENST00000519254 KRT28Q7Z3Y7 464 aa19.36■□□□□ 0.69
CLN8-204ENST00000519254 ABTB2Q8N961 1025 aa19.35■□□□□ 0.69
CLN8-204ENST00000519254 BLMP54132 1417 aaPredicted RBP19.35■□□□□ 0.69
CLN8-204ENST00000519254 NLRP6P59044 892 aa19.34■□□□□ 0.69
CLN8-204ENST00000519254 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
CLN8-204ENST00000519254 NPHP3Q7Z494 1330 aa19.33■□□□□ 0.69
CLN8-204ENST00000519254 OVOS2A0A0J9YW53 1432 aa19.33■□□□□ 0.69
CLN8-204ENST00000519254 OVOS2Q6IE36 1432 aa19.33■□□□□ 0.69
CLN8-204ENST00000519254 SENP3-EIF4A1A0A087X0R7 540 aa19.33■□□□□ 0.68
CLN8-204ENST00000519254 SOX12O15370 315 aa19.33■□□□□ 0.68
CLN8-204ENST00000519254 FBLN1P23142 703 aa19.33■□□□□ 0.68
CLN8-204ENST00000519254 TRPM3Q9HCF6 1732 aaPredicted RBP19.33■□□□□ 0.68
CLN8-204ENST00000519254 PLEKHG5O94827 1062 aa19.32■□□□□ 0.68
CLN8-204ENST00000519254 SUPT16HQ9Y5B9 1047 aaKnown RBP19.32■□□□□ 0.68
CLN8-204ENST00000519254 MTHFSP49914 203 aa19.31■□□□□ 0.68
CLN8-204ENST00000519254 ADAMTS8Q9UP79 889 aa19.31■□□□□ 0.68
CLN8-204ENST00000519254 USP31Q70CQ4 1352 aa19.3■□□□□ 0.68
CLN8-204ENST00000519254 PXDNQ92626 1479 aa19.29■□□□□ 0.68
CLN8-204ENST00000519254 SMG6Q86US8 1419 aaKnown RBP19.29■□□□□ 0.68
CLN8-204ENST00000519254 PPM1GO15355 546 aaPredicted RBP19.29■□□□□ 0.68
CLN8-204ENST00000519254 MARF1Q9Y4F3 1742 aaKnown RBP19.28■□□□□ 0.68
CLN8-204ENST00000519254 ROBO1Q9Y6N7 1651 aa19.28■□□□□ 0.68
CLN8-204ENST00000519254 RRS1Q15050 365 aaKnown RBP19.27■□□□□ 0.68
CLN8-204ENST00000519254 WDR43Q15061 677 aaKnown RBP eCLIP19.27■□□□□ 0.67
CLN8-204ENST00000519254 MAP2P11137 1827 aaKnown RBP19.26■□□□□ 0.67
CLN8-204ENST00000519254 CFAP53Q96M91 514 aa19.26■□□□□ 0.67
CLN8-204ENST00000519254 EMILIN1Q9Y6C2 1016 aa19.26■□□□□ 0.67
CLN8-204ENST00000519254 USP54Q70EL1 1684 aa19.26■□□□□ 0.67
CLN8-204ENST00000519254 SBNO1A3KN83 1393 aa19.26■□□□□ 0.67
CLN8-204ENST00000519254 AATKQ6ZMQ8 1374 aa19.26■□□□□ 0.67
CLN8-204ENST00000519254 SHPRHQ149N8 1683 aa19.25■□□□□ 0.67
CLN8-204ENST00000519254 ALS2Q96Q42 1657 aa19.25■□□□□ 0.67
CLN8-204ENST00000519254 FKBP8Q14318 412 aa19.25■□□□□ 0.67
CLN8-204ENST00000519254 POLKQ9UBT6 870 aa19.25■□□□□ 0.67
CLN8-204ENST00000519254 TNS3Q68CZ2 1445 aa19.25■□□□□ 0.67
CLN8-204ENST00000519254 NHSL1Q5SYE7 1610 aa19.25■□□□□ 0.67
CLN8-204ENST00000519254 TOM1O60784 492 aa19.24■□□□□ 0.67
CLN8-204ENST00000519254 PIP4K2BP78356 416 aa19.24■□□□□ 0.67
CLN8-204ENST00000519254 NUDCQ9Y266 331 aa19.24■□□□□ 0.67
CLN8-204ENST00000519254 UBAP1LF5GYI3 381 aa19.23■□□□□ 0.67
CLN8-204ENST00000519254 SOS2Q07890 1332 aaPredicted RBP19.22■□□□□ 0.67
CLN8-204ENST00000519254 NEFLP07196 543 aa19.22■□□□□ 0.67
CLN8-204ENST00000519254 SPATA31A3Q5VYP0 1347 aa19.22■□□□□ 0.67
CLN8-204ENST00000519254 CERKQ8TCT0 537 aa19.21■□□□□ 0.67
CLN8-204ENST00000519254 SALL2Q9Y467 1007 aaPredicted RBP19.21■□□□□ 0.67
CLN8-204ENST00000519254 MAP3K19Q56UN5 1328 aa19.19■□□□□ 0.66
CLN8-204ENST00000519254 ZBTB7CA1YPR0 619 aa19.19■□□□□ 0.66
CLN8-204ENST00000519254 IQSEC2Q5JU85 1478 aa19.19■□□□□ 0.66
CLN8-204ENST00000519254 CDK12Q9NYV4 1490 aaPredicted RBP19.19■□□□□ 0.66
CLN8-204ENST00000519254 ARHGEF10O15013 1369 aa19.19■□□□□ 0.66
CLN8-204ENST00000519254 COL3A1P02461 1466 aaPredicted RBP19.19■□□□□ 0.66
CLN8-204ENST00000519254 PEAK1Q9H792 1746 aa19.18■□□□□ 0.66
CLN8-204ENST00000519254 SLIT3O75094 1523 aa19.18■□□□□ 0.66
CLN8-204ENST00000519254 USP19O94966 1318 aa19.18■□□□□ 0.66
CLN8-204ENST00000519254 PDE3BQ13370 1112 aa19.18■□□□□ 0.66
CLN8-204ENST00000519254 KCNH5Q8NCM2 988 aa19.18■□□□□ 0.66
CLN8-204ENST00000519254 MED1Q15648 1581 aaPredicted RBP19.18■□□□□ 0.66
CLN8-204ENST00000519254 NFAT5O94916 1531 aa19.18■□□□□ 0.66
CLN8-204ENST00000519254 CABLES1Q8TDN4 633 aa19.17■□□□□ 0.66
CLN8-204ENST00000519254 AHDC1Q5TGY3 1603 aaPredicted RBP19.17■□□□□ 0.66
CLN8-204ENST00000519254 GCP02774 474 aa19.16■□□□□ 0.66
CLN8-204ENST00000519254 AMPHP49418 695 aa19.16■□□□□ 0.66
CLN8-204ENST00000519254 PNPLA6Q8IY17 1366 aa19.16■□□□□ 0.66
CLN8-204ENST00000519254 LTN1O94822 1766 aa19.16■□□□□ 0.66
CLN8-204ENST00000519254 DIAPH1O60610 1272 aaKnown RBP19.16■□□□□ 0.66
CLN8-204ENST00000519254 PHRF1Q9P1Y6 1649 aaKnown RBP19.15■□□□□ 0.66
CLN8-204ENST00000519254 U2SURPO15042 1029 aaKnown RBP19.15■□□□□ 0.66
CLN8-204ENST00000519254 PHLPP1O60346 1717 aa19.15■□□□□ 0.66
CLN8-204ENST00000519254 CCDC146Q8IYE0 955 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms