RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 COL14A1Q05707 1796 aaKnown RBP22.72■■□□□ 1.23
MRPS28-204ENST00000519120 ONECUT3O60422 494 aaPredicted RBP22.71■■□□□ 1.23
MRPS28-204ENST00000519120 PAK3O75914 559 aaPredicted RBP22.71■■□□□ 1.23
MRPS28-204ENST00000519120 CCDC125Q86Z20 511 aa22.71■■□□□ 1.23
MRPS28-204ENST00000519120 TRPM1Q7Z4N2 1603 aa22.71■■□□□ 1.23
MRPS28-204ENST00000519120 SIN3AQ96ST3 1273 aa22.7■■□□□ 1.22
MRPS28-204ENST00000519120 ACEP12821 1306 aa22.7■■□□□ 1.22
MRPS28-204ENST00000519120 NRAPQ86VF7 1730 aa22.7■■□□□ 1.22
MRPS28-204ENST00000519120 PLEKHG5O94827 1062 aa22.69■■□□□ 1.22
MRPS28-204ENST00000519120 NBPF8Q3BBV2 869 aa22.69■■□□□ 1.22
MRPS28-204ENST00000519120 QRICH2Q9H0J4 1663 aa22.68■■□□□ 1.22
MRPS28-204ENST00000519120 BRD4O60885 1362 aaPredicted RBP22.67■■□□□ 1.22
MRPS28-204ENST00000519120 SRPK2P78362 688 aaKnown RBP22.66■■□□□ 1.22
MRPS28-204ENST00000519120 BTG4Q9NY30 223 aa22.66■■□□□ 1.22
MRPS28-204ENST00000519120 PPIP5K1Q6PFW1 1433 aa22.65■■□□□ 1.22
MRPS28-204ENST00000519120 PHRF1Q9P1Y6 1649 aaKnown RBP22.65■■□□□ 1.22
MRPS28-204ENST00000519120 SEPT12Q8IYM1 358 aa22.65■■□□□ 1.22
MRPS28-204ENST00000519120 EP400Q96L91 3159 aa22.64■■□□□ 1.22
MRPS28-204ENST00000519120 NEUROD1Q13562 356 aa22.64■■□□□ 1.21
MRPS28-204ENST00000519120 CCDC9Q9Y3X0 531 aaKnown RBP22.64■■□□□ 1.21
MRPS28-204ENST00000519120 ROCK2O75116 1388 aaKnown RBP22.63■■□□□ 1.21
MRPS28-204ENST00000519120 PRDM11Q9NQV5 511 aa22.63■■□□□ 1.21
MRPS28-204ENST00000519120 BRWD3Q6RI45 1802 aa22.61■■□□□ 1.21
MRPS28-204ENST00000519120 BLMP54132 1417 aaPredicted RBP22.61■■□□□ 1.21
MRPS28-204ENST00000519120 CABP2Q9NPB3 220 aa22.61■■□□□ 1.21
MRPS28-204ENST00000519120 KIAA0232Q92628 1395 aa22.61■■□□□ 1.21
MRPS28-204ENST00000519120 EVC2Q86UK5 1308 aa22.6■■□□□ 1.21
MRPS28-204ENST00000519120 USP19O94966 1318 aa22.59■■□□□ 1.21
MRPS28-204ENST00000519120 SPATA31A5Q5VU36 1347 aa22.58■■□□□ 1.21
MRPS28-204ENST00000519120 SPATA31A7Q8IWB4 1347 aa22.58■■□□□ 1.21
MRPS28-204ENST00000519120 ABTB2Q8N961 1025 aa22.58■■□□□ 1.21
MRPS28-204ENST00000519120 CPDO75976 1380 aa22.58■■□□□ 1.21
MRPS28-204ENST00000519120 NRKQ7Z2Y5 1582 aa22.58■■□□□ 1.2
MRPS28-204ENST00000519120 KRT27Q7Z3Y8 459 aa22.57■■□□□ 1.2
MRPS28-204ENST00000519120 USP6P35125 1406 aa22.57■■□□□ 1.2
MRPS28-204ENST00000519120 SBNO2Q9Y2G9 1366 aa22.56■■□□□ 1.2
MRPS28-204ENST00000519120 NLRP13Q86W25 1043 aa22.56■■□□□ 1.2
MRPS28-204ENST00000519120 FAM98CQ17RN3 349 aaKnown RBP22.55■■□□□ 1.2
MRPS28-204ENST00000519120 CABP1Q9NZU7 370 aa22.55■■□□□ 1.2
MRPS28-204ENST00000519120 ZC3H6P61129 1189 aaKnown RBP22.54■■□□□ 1.2
MRPS28-204ENST00000519120 NUTM2GQ5VZR2 741 aa22.54■■□□□ 1.2
MRPS28-204ENST00000519120 THSD7AQ9UPZ6 1657 aa22.54■■□□□ 1.2
MRPS28-204ENST00000519120 SSH2Q76I76 1423 aa22.54■■□□□ 1.2
MRPS28-204ENST00000519120 CHRNA2Q15822 529 aa22.52■■□□□ 1.2
MRPS28-204ENST00000519120 SPATA31A1Q5TZJ5 1347 aa22.52■■□□□ 1.2
MRPS28-204ENST00000519120 LMO7Q8WWI1 1683 aa22.52■■□□□ 1.2
MRPS28-204ENST00000519120 A0A0G2JS52 829 aa22.51■■□□□ 1.19
MRPS28-204ENST00000519120 GCP02774 474 aa22.51■■□□□ 1.19
MRPS28-204ENST00000519120 MYT1Q01538 1121 aa22.51■■□□□ 1.19
MRPS28-204ENST00000519120 TONSLQ96HA7 1378 aa22.5■■□□□ 1.19
MRPS28-204ENST00000519120 TRIM26Q12899 539 aaPredicted RBP22.5■■□□□ 1.19
MRPS28-204ENST00000519120 ZNF692Q9BU19 519 aaPredicted RBP22.5■■□□□ 1.19
MRPS28-204ENST00000519120 SLIT3O75094 1523 aa22.49■■□□□ 1.19
MRPS28-204ENST00000519120 SF3B2Q13435 895 aaKnown RBP22.49■■□□□ 1.19
MRPS28-204ENST00000519120 ZRANB1Q9UGI0 708 aa22.49■■□□□ 1.19
MRPS28-204ENST00000519120 CAMTA1Q9Y6Y1 1673 aa22.49■■□□□ 1.19
MRPS28-204ENST00000519120 CARD11Q9BXL7 1154 aa22.47■■□□□ 1.19
MRPS28-204ENST00000519120 NLRP6P59044 892 aa22.46■■□□□ 1.19
MRPS28-204ENST00000519120 STRN4Q9NRL3 753 aa22.46■■□□□ 1.19
MRPS28-204ENST00000519120 CPSF1Q10570 1443 aaKnown RBP22.46■■□□□ 1.19
MRPS28-204ENST00000519120 PIK3C2AO00443 1686 aa22.46■■□□□ 1.19
MRPS28-204ENST00000519120 AKAP12Q02952 1782 aa22.45■■□□□ 1.19
MRPS28-204ENST00000519120 EVA1CP58658 441 aa22.45■■□□□ 1.18
MRPS28-204ENST00000519120 BARGINQ6ZT62 677 aa22.45■■□□□ 1.18
MRPS28-204ENST00000519120 AATKQ6ZMQ8 1374 aa22.44■■□□□ 1.18
MRPS28-204ENST00000519120 TTC21AQ8NDW8 1320 aa22.44■■□□□ 1.18
MRPS28-204ENST00000519120 COL5A2P05997 1499 aaPredicted RBP22.43■■□□□ 1.18
MRPS28-204ENST00000519120 TTC21BQ7Z4L5 1316 aa22.42■■□□□ 1.18
MRPS28-204ENST00000519120 DEFB132Q7Z7B7 95 aa22.42■■□□□ 1.18
MRPS28-204ENST00000519120 THRAP3Q9Y2W1 955 aaKnown RBP22.42■■□□□ 1.18
MRPS28-204ENST00000519120 RGPD1P0DJD0 1748 aa22.41■■□□□ 1.18
MRPS28-204ENST00000519120 BAG6P46379 1132 aa22.41■■□□□ 1.18
MRPS28-204ENST00000519120 LARP1Q6PKG0 1096 aaKnown RBP22.4■■□□□ 1.18
MRPS28-204ENST00000519120 TCP11L2Q8N4U5 519 aa22.4■■□□□ 1.18
MRPS28-204ENST00000519120 PUS7Q96PZ0 661 aaKnown RBP22.4■■□□□ 1.18
MRPS28-204ENST00000519120 KTN1Q86UP2 1357 aaKnown RBP22.39■■□□□ 1.18
MRPS28-204ENST00000519120 KCNH5Q8NCM2 988 aa22.39■■□□□ 1.17
MRPS28-204ENST00000519120 MON2Q7Z3U7 1717 aa22.39■■□□□ 1.17
MRPS28-204ENST00000519120 DISP2A7MBM2 1401 aa22.39■■□□□ 1.17
MRPS28-204ENST00000519120 CRB1P82279 1406 aa22.38■■□□□ 1.17
MRPS28-204ENST00000519120 FAM196AQ6ZSG2 479 aa22.37■■□□□ 1.17
MRPS28-204ENST00000519120 COL18A1P39060 1754 aa22.36■■□□□ 1.17
MRPS28-204ENST00000519120 USP35Q9P2H5 1018 aa22.36■■□□□ 1.17
MRPS28-204ENST00000519120 SLC24A1O60721 1099 aa22.35■■□□□ 1.17
MRPS28-204ENST00000519120 ARHGEF25Q86VW2 580 aa22.35■■□□□ 1.17
MRPS28-204ENST00000519120 CD163L1Q9NR16 1453 aa22.34■■□□□ 1.17
MRPS28-204ENST00000519120 TNS1Q9HBL0 1735 aaKnown RBP22.34■■□□□ 1.17
MRPS28-204ENST00000519120 USP54Q70EL1 1684 aa22.34■■□□□ 1.17
MRPS28-204ENST00000519120 FAM182BQ5T319 152 aa22.34■■□□□ 1.17
MRPS28-204ENST00000519120 ABCC6O95255 1503 aa22.34■■□□□ 1.17
MRPS28-204ENST00000519120 USP31Q70CQ4 1352 aa22.34■■□□□ 1.17
MRPS28-204ENST00000519120 PARP4Q9UKK3 1724 aaKnown RBP22.34■■□□□ 1.17
MRPS28-204ENST00000519120 NFAT5O94916 1531 aa22.33■■□□□ 1.17
MRPS28-204ENST00000519120 PDE3BQ13370 1112 aa22.33■■□□□ 1.17
MRPS28-204ENST00000519120 NINLQ9Y2I6 1382 aa22.31■■□□□ 1.16
MRPS28-204ENST00000519120 C11orf95C9JLR9 678 aaPredicted RBP22.31■■□□□ 1.16
MRPS28-204ENST00000519120 WDR17Q8IZU2 1322 aa22.31■■□□□ 1.16
MRPS28-204ENST00000519120 HDGFL2Q7Z4V5 671 aaPredicted RBP22.3■■□□□ 1.16
MRPS28-204ENST00000519120 EDC4Q6P2E9 1401 aaKnown RBP22.3■■□□□ 1.16
MRPS28-204ENST00000519120 PARD3Q8TEW0 1356 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms