RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 CENPJQ9HC77 1338 aaPredicted RBP20.07■□□□□ 0.8
BRD9-217ENST00000519112 PAK3O75914 559 aaPredicted RBP20.06■□□□□ 0.8
BRD9-217ENST00000519112 CCDC61Q9Y6R9 512 aa20.06■□□□□ 0.8
BRD9-217ENST00000519112 POLR3AO14802 1390 aaPredicted RBP20.06■□□□□ 0.8
BRD9-217ENST00000519112 ACEP12821 1306 aa20.05■□□□□ 0.8
BRD9-217ENST00000519112 NRAPQ86VF7 1730 aa20.05■□□□□ 0.8
BRD9-217ENST00000519112 BRWD3Q6RI45 1802 aa20.05■□□□□ 0.8
BRD9-217ENST00000519112 PLEKHG3A1L390 1219 aa20.05■□□□□ 0.8
BRD9-217ENST00000519112 NBPF8Q3BBV2 869 aa20.04■□□□□ 0.8
BRD9-217ENST00000519112 VPS72Q15906 364 aa20.03■□□□□ 0.8
BRD9-217ENST00000519112 CABP2Q9NPB3 220 aa20.03■□□□□ 0.8
BRD9-217ENST00000519112 COL14A1Q05707 1796 aaKnown RBP20.03■□□□□ 0.8
BRD9-217ENST00000519112 PHRF1Q9P1Y6 1649 aaKnown RBP20.02■□□□□ 0.8
BRD9-217ENST00000519112 ATAD2Q6PL18 1390 aa20.02■□□□□ 0.8
BRD9-217ENST00000519112 SRPK2P78362 688 aaKnown RBP20.01■□□□□ 0.79
BRD9-217ENST00000519112 PPIP5K1Q6PFW1 1433 aa20.01■□□□□ 0.79
BRD9-217ENST00000519112 ROCK2O75116 1388 aaKnown RBP20■□□□□ 0.79
BRD9-217ENST00000519112 BTG4Q9NY30 223 aa20■□□□□ 0.79
BRD9-217ENST00000519112 NUTM2GQ5VZR2 741 aa19.99■□□□□ 0.79
BRD9-217ENST00000519112 TRIM26Q12899 539 aaPredicted RBP19.98■□□□□ 0.79
BRD9-217ENST00000519112 ONECUT3O60422 494 aaPredicted RBP19.97■□□□□ 0.79
BRD9-217ENST00000519112 SEPT12Q8IYM1 358 aa19.96■□□□□ 0.79
BRD9-217ENST00000519112 CABP1Q9NZU7 370 aa19.95■□□□□ 0.78
BRD9-217ENST00000519112 CCDC9Q9Y3X0 531 aaKnown RBP19.95■□□□□ 0.78
BRD9-217ENST00000519112 KIAA0232Q92628 1395 aa19.95■□□□□ 0.78
BRD9-217ENST00000519112 NRKQ7Z2Y5 1582 aa19.94■□□□□ 0.78
BRD9-217ENST00000519112 ABTB2Q8N961 1025 aa19.93■□□□□ 0.78
BRD9-217ENST00000519112 PRDM11Q9NQV5 511 aa19.93■□□□□ 0.78
BRD9-217ENST00000519112 ZC3H6P61129 1189 aaKnown RBP19.92■□□□□ 0.78
BRD9-217ENST00000519112 CHRNA2Q15822 529 aa19.92■□□□□ 0.78
BRD9-217ENST00000519112 EVC2Q86UK5 1308 aa19.92■□□□□ 0.78
BRD9-217ENST00000519112 USP6P35125 1406 aa19.91■□□□□ 0.78
BRD9-217ENST00000519112 FAM98CQ17RN3 349 aaKnown RBP19.9■□□□□ 0.78
BRD9-217ENST00000519112 USP19O94966 1318 aa19.9■□□□□ 0.78
BRD9-217ENST00000519112 SPATA31A5Q5VU36 1347 aa19.9■□□□□ 0.78
BRD9-217ENST00000519112 SPATA31A7Q8IWB4 1347 aa19.9■□□□□ 0.78
BRD9-217ENST00000519112 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
BRD9-217ENST00000519112 SSH2Q76I76 1423 aa19.9■□□□□ 0.78
BRD9-217ENST00000519112 AKAP12Q02952 1782 aa19.9■□□□□ 0.78
BRD9-217ENST00000519112 LMO7Q8WWI1 1683 aa19.88■□□□□ 0.77
BRD9-217ENST00000519112 PIK3C2AO00443 1686 aa19.87■□□□□ 0.77
BRD9-217ENST00000519112 BRD4O60885 1362 aaPredicted RBP19.87■□□□□ 0.77
BRD9-217ENST00000519112 CARD11Q9BXL7 1154 aa19.87■□□□□ 0.77
BRD9-217ENST00000519112 THSD7AQ9UPZ6 1657 aa19.87■□□□□ 0.77
BRD9-217ENST00000519112 CAMTA1Q9Y6Y1 1673 aa19.87■□□□□ 0.77
BRD9-217ENST00000519112 KRT27Q7Z3Y8 459 aa19.86■□□□□ 0.77
BRD9-217ENST00000519112 NLRP13Q86W25 1043 aa19.86■□□□□ 0.77
BRD9-217ENST00000519112 CCDC125Q86Z20 511 aa19.86■□□□□ 0.77
BRD9-217ENST00000519112 CPDO75976 1380 aa19.85■□□□□ 0.77
BRD9-217ENST00000519112 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
BRD9-217ENST00000519112 SPATA31A1Q5TZJ5 1347 aa19.85■□□□□ 0.77
BRD9-217ENST00000519112 GCP02774 474 aa19.85■□□□□ 0.77
BRD9-217ENST00000519112 STRN4Q9NRL3 753 aa19.85■□□□□ 0.77
BRD9-217ENST00000519112 SRCAPQ6ZRS2 3230 aa19.84■□□□□ 0.77
BRD9-217ENST00000519112 BLMP54132 1417 aaPredicted RBP19.84■□□□□ 0.77
BRD9-217ENST00000519112 SLIT3O75094 1523 aa19.83■□□□□ 0.77
BRD9-217ENST00000519112 A0A0G2JS52 829 aa19.83■□□□□ 0.77
BRD9-217ENST00000519112 MYT1Q01538 1121 aa19.83■□□□□ 0.77
BRD9-217ENST00000519112 CPSF1Q10570 1443 aaKnown RBP19.83■□□□□ 0.76
BRD9-217ENST00000519112 NLRP6P59044 892 aa19.82■□□□□ 0.76
BRD9-217ENST00000519112 MON2Q7Z3U7 1717 aa19.82■□□□□ 0.76
BRD9-217ENST00000519112 COL18A1P39060 1754 aa19.8■□□□□ 0.76
BRD9-217ENST00000519112 TTC21BQ7Z4L5 1316 aa19.8■□□□□ 0.76
BRD9-217ENST00000519112 FAM182BQ5T319 152 aa19.8■□□□□ 0.76
BRD9-217ENST00000519112 DEFB132Q7Z7B7 95 aa19.8■□□□□ 0.76
BRD9-217ENST00000519112 ZNF692Q9BU19 519 aaPredicted RBP19.8■□□□□ 0.76
BRD9-217ENST00000519112 CD163L1Q9NR16 1453 aa19.79■□□□□ 0.76
BRD9-217ENST00000519112 LARP1Q6PKG0 1096 aaKnown RBP19.79■□□□□ 0.76
BRD9-217ENST00000519112 EVA1CP58658 441 aa19.78■□□□□ 0.76
BRD9-217ENST00000519112 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
BRD9-217ENST00000519112 COL5A2P05997 1499 aaPredicted RBP19.78■□□□□ 0.76
BRD9-217ENST00000519112 RGPD5Q99666 1765 aa19.77■□□□□ 0.76
BRD9-217ENST00000519112 KTN1Q86UP2 1357 aaKnown RBP19.76■□□□□ 0.75
BRD9-217ENST00000519112 TESK2Q96S53 571 aa19.75■□□□□ 0.75
BRD9-217ENST00000519112 TTC21AQ8NDW8 1320 aa19.75■□□□□ 0.75
BRD9-217ENST00000519112 AATKQ6ZMQ8 1374 aa19.74■□□□□ 0.75
BRD9-217ENST00000519112 ZBTB7CA1YPR0 619 aa19.74■□□□□ 0.75
BRD9-217ENST00000519112 BARGINQ6ZT62 677 aa19.74■□□□□ 0.75
BRD9-217ENST00000519112 SLC12A5Q9H2X9 1139 aa19.74■□□□□ 0.75
BRD9-217ENST00000519112 ZRANB1Q9UGI0 708 aa19.74■□□□□ 0.75
BRD9-217ENST00000519112 AXIN2Q9Y2T1 843 aa19.74■□□□□ 0.75
BRD9-217ENST00000519112 RGPD1P0DJD0 1748 aa19.73■□□□□ 0.75
BRD9-217ENST00000519112 ST20-MTHFSA0A0A6YYL1 179 aa19.73■□□□□ 0.75
BRD9-217ENST00000519112 TNS1Q9HBL0 1735 aaKnown RBP19.73■□□□□ 0.75
BRD9-217ENST00000519112 USP54Q70EL1 1684 aa19.72■□□□□ 0.75
BRD9-217ENST00000519112 SF3B2Q13435 895 aaKnown RBP19.72■□□□□ 0.75
BRD9-217ENST00000519112 ARHGEF25Q86VW2 580 aa19.72■□□□□ 0.75
BRD9-217ENST00000519112 TCP11L2Q8N4U5 519 aa19.72■□□□□ 0.75
BRD9-217ENST00000519112 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
BRD9-217ENST00000519112 NFAT5O94916 1531 aa19.71■□□□□ 0.75
BRD9-217ENST00000519112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.71■□□□□ 0.75
BRD9-217ENST00000519112 PARP4Q9UKK3 1724 aaKnown RBP19.71■□□□□ 0.75
BRD9-217ENST00000519112 CRB1P82279 1406 aa19.7■□□□□ 0.74
BRD9-217ENST00000519112 SOX12O15370 315 aa19.7■□□□□ 0.74
BRD9-217ENST00000519112 NME9Q86XW9 330 aa19.69■□□□□ 0.74
BRD9-217ENST00000519112 KCNH5Q8NCM2 988 aa19.69■□□□□ 0.74
BRD9-217ENST00000519112 PUS7Q96PZ0 661 aaKnown RBP19.69■□□□□ 0.74
BRD9-217ENST00000519112 THRAP3Q9Y2W1 955 aaKnown RBP19.69■□□□□ 0.74
BRD9-217ENST00000519112 USP31Q70CQ4 1352 aa19.69■□□□□ 0.74
BRD9-217ENST00000519112 A0A1W2PP64 1363 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms