RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 COL14A1Q05707 1796 aaKnown RBP20.07■□□□□ 0.8
VDAC3-204ENST00000519072 ARHGEF28Q8N1W1 1705 aaKnown RBP20.07■□□□□ 0.8
VDAC3-204ENST00000519072 CRYBG1Q9Y4K1 1723 aa20.07■□□□□ 0.8
VDAC3-204ENST00000519072 WASLO00401 505 aaPredicted RBP20.06■□□□□ 0.8
VDAC3-204ENST00000519072 ITSN1Q15811 1721 aa20.06■□□□□ 0.8
VDAC3-204ENST00000519072 HRCP23327 699 aa20.04■□□□□ 0.8
VDAC3-204ENST00000519072 KRT27Q7Z3Y8 459 aa20.04■□□□□ 0.8
VDAC3-204ENST00000519072 SF3B2Q13435 895 aaKnown RBP20.02■□□□□ 0.8
VDAC3-204ENST00000519072 DEFB132Q7Z7B7 95 aa20.02■□□□□ 0.8
VDAC3-204ENST00000519072 BTG4Q9NY30 223 aa20.02■□□□□ 0.8
VDAC3-204ENST00000519072 ATP7BP35670 1465 aa20.01■□□□□ 0.79
VDAC3-204ENST00000519072 NGDNQ8NEJ9 315 aaKnown RBP20.01■□□□□ 0.79
VDAC3-204ENST00000519072 KIAA1210Q9ULL0 1709 aa19.99■□□□□ 0.79
VDAC3-204ENST00000519072 FAM98CQ17RN3 349 aaKnown RBP19.98■□□□□ 0.79
VDAC3-204ENST00000519072 A0A0G2JS52 829 aa19.97■□□□□ 0.79
VDAC3-204ENST00000519072 PAK3O75914 559 aaPredicted RBP19.97■□□□□ 0.79
VDAC3-204ENST00000519072 MYT1Q01538 1121 aa19.97■□□□□ 0.79
VDAC3-204ENST00000519072 NUDT16Q96DE0 195 aaKnown RBP19.97■□□□□ 0.79
VDAC3-204ENST00000519072 TOPAZ1Q8N9V7 1692 aa19.97■□□□□ 0.79
VDAC3-204ENST00000519072 PHRF1Q9P1Y6 1649 aaKnown RBP19.96■□□□□ 0.79
VDAC3-204ENST00000519072 THSD7AQ9UPZ6 1657 aa19.96■□□□□ 0.79
VDAC3-204ENST00000519072 SPATA31A5Q5VU36 1347 aa19.96■□□□□ 0.79
VDAC3-204ENST00000519072 SPATA31A7Q8IWB4 1347 aa19.96■□□□□ 0.79
VDAC3-204ENST00000519072 RGPD1P0DJD0 1748 aa19.95■□□□□ 0.78
VDAC3-204ENST00000519072 PRDM11Q9NQV5 511 aa19.94■□□□□ 0.78
VDAC3-204ENST00000519072 BAG6P46379 1132 aa19.93■□□□□ 0.78
VDAC3-204ENST00000519072 CDK19Q9BWU1 502 aa19.92■□□□□ 0.78
VDAC3-204ENST00000519072 POLR3AO14802 1390 aaPredicted RBP19.92■□□□□ 0.78
VDAC3-204ENST00000519072 LRP5O75197 1615 aa19.91■□□□□ 0.78
VDAC3-204ENST00000519072 KIAA0232Q92628 1395 aa19.91■□□□□ 0.78
VDAC3-204ENST00000519072 CNKSR2Q8WXI2 1034 aa19.89■□□□□ 0.77
VDAC3-204ENST00000519072 TNS1Q9HBL0 1735 aaKnown RBP19.89■□□□□ 0.77
VDAC3-204ENST00000519072 CCDC61Q9Y6R9 512 aa19.89■□□□□ 0.77
VDAC3-204ENST00000519072 ACEP12821 1306 aa19.88■□□□□ 0.77
VDAC3-204ENST00000519072 SPATA31A1Q5TZJ5 1347 aa19.88■□□□□ 0.77
VDAC3-204ENST00000519072 PLEKHG3A1L390 1219 aa19.88■□□□□ 0.77
VDAC3-204ENST00000519072 NBPF8Q3BBV2 869 aa19.87■□□□□ 0.77
VDAC3-204ENST00000519072 NRKQ7Z2Y5 1582 aa19.87■□□□□ 0.77
VDAC3-204ENST00000519072 DISP2A7MBM2 1401 aa19.86■□□□□ 0.77
VDAC3-204ENST00000519072 CHRNA2Q15822 529 aa19.86■□□□□ 0.77
VDAC3-204ENST00000519072 FAM182BQ5T319 152 aa19.86■□□□□ 0.77
VDAC3-204ENST00000519072 ZC3H6P61129 1189 aaKnown RBP19.85■□□□□ 0.77
VDAC3-204ENST00000519072 NUTM2GQ5VZR2 741 aa19.85■□□□□ 0.77
VDAC3-204ENST00000519072 EN1Q05925 392 aaPredicted RBP19.84■□□□□ 0.77
VDAC3-204ENST00000519072 NBPF1Q3BBV0 1214 aa19.84■□□□□ 0.77
VDAC3-204ENST00000519072 STRN4Q9NRL3 753 aa19.83■□□□□ 0.77
VDAC3-204ENST00000519072 LMO7Q8WWI1 1683 aa19.83■□□□□ 0.76
VDAC3-204ENST00000519072 PSDA5PKW4 1024 aaPredicted RBP19.82■□□□□ 0.76
VDAC3-204ENST00000519072 SSH2Q76I76 1423 aa19.82■□□□□ 0.76
VDAC3-204ENST00000519072 CPDO75976 1380 aa19.82■□□□□ 0.76
VDAC3-204ENST00000519072 CAMTA1Q9Y6Y1 1673 aa19.81■□□□□ 0.76
VDAC3-204ENST00000519072 USP19O94966 1318 aa19.81■□□□□ 0.76
VDAC3-204ENST00000519072 ABTB2Q8N961 1025 aa19.81■□□□□ 0.76
VDAC3-204ENST00000519072 PPIP5K1Q6PFW1 1433 aa19.81■□□□□ 0.76
VDAC3-204ENST00000519072 QRICH2Q9H0J4 1663 aa19.81■□□□□ 0.76
VDAC3-204ENST00000519072 CENPJQ9HC77 1338 aaPredicted RBP19.8■□□□□ 0.76
VDAC3-204ENST00000519072 FAM196AQ6ZSG2 479 aa19.8■□□□□ 0.76
VDAC3-204ENST00000519072 BARGINQ6ZT62 677 aa19.8■□□□□ 0.76
VDAC3-204ENST00000519072 SRPK2P78362 688 aaKnown RBP19.79■□□□□ 0.76
VDAC3-204ENST00000519072 EVA1CP58658 441 aa19.78■□□□□ 0.76
VDAC3-204ENST00000519072 BRD4O60885 1362 aaPredicted RBP19.78■□□□□ 0.76
VDAC3-204ENST00000519072 NLRP13Q86W25 1043 aa19.77■□□□□ 0.76
VDAC3-204ENST00000519072 USP35Q9P2H5 1018 aa19.77■□□□□ 0.76
VDAC3-204ENST00000519072 TRIM37O94972 964 aa19.76■□□□□ 0.75
VDAC3-204ENST00000519072 EZH2Q15910 746 aaKnown RBP19.76■□□□□ 0.75
VDAC3-204ENST00000519072 LARP1Q6PKG0 1096 aaKnown RBP19.76■□□□□ 0.75
VDAC3-204ENST00000519072 CABP2Q9NPB3 220 aa19.76■□□□□ 0.75
VDAC3-204ENST00000519072 PARD3Q8TEW0 1356 aa19.75■□□□□ 0.75
VDAC3-204ENST00000519072 GCP02774 474 aa19.75■□□□□ 0.75
VDAC3-204ENST00000519072 CAMKK2Q96RR4 588 aa19.75■□□□□ 0.75
VDAC3-204ENST00000519072 RREB1Q92766 1687 aa19.75■□□□□ 0.75
VDAC3-204ENST00000519072 PARP4Q9UKK3 1724 aaKnown RBP19.74■□□□□ 0.75
VDAC3-204ENST00000519072 HOXD11P31277 338 aaPredicted RBP19.74■□□□□ 0.75
VDAC3-204ENST00000519072 PDE3BQ13370 1112 aa19.74■□□□□ 0.75
VDAC3-204ENST00000519072 R3HDM1Q15032 1099 aaKnown RBP19.74■□□□□ 0.75
VDAC3-204ENST00000519072 TCP11L2Q8N4U5 519 aa19.74■□□□□ 0.75
VDAC3-204ENST00000519072 COL5A2P05997 1499 aaPredicted RBP19.73■□□□□ 0.75
VDAC3-204ENST00000519072 THRAP3Q9Y2W1 955 aaKnown RBP19.73■□□□□ 0.75
VDAC3-204ENST00000519072 USP6P35125 1406 aa19.73■□□□□ 0.75
VDAC3-204ENST00000519072 TRPM1Q7Z4N2 1603 aa19.72■□□□□ 0.75
VDAC3-204ENST00000519072 SLIT3O75094 1523 aa19.71■□□□□ 0.75
VDAC3-204ENST00000519072 DCAF8L1A6NGE4 600 aa19.71■□□□□ 0.75
VDAC3-204ENST00000519072 APBA3O96018 575 aa19.71■□□□□ 0.75
VDAC3-204ENST00000519072 CABP1Q9NZU7 370 aa19.71■□□□□ 0.75
VDAC3-204ENST00000519072 NUP188Q5SRE5 1749 aa19.71■□□□□ 0.75
VDAC3-204ENST00000519072 PIK3C2AO00443 1686 aa19.7■□□□□ 0.74
VDAC3-204ENST00000519072 CRB1P82279 1406 aa19.69■□□□□ 0.74
VDAC3-204ENST00000519072 L3MBTL2Q969R5 705 aa19.69■□□□□ 0.74
VDAC3-204ENST00000519072 COL18A1P39060 1754 aa19.68■□□□□ 0.74
VDAC3-204ENST00000519072 NLRP6P59044 892 aa19.68■□□□□ 0.74
VDAC3-204ENST00000519072 AATKQ6ZMQ8 1374 aa19.68■□□□□ 0.74
VDAC3-204ENST00000519072 AKAP12Q02952 1782 aa19.67■□□□□ 0.74
VDAC3-204ENST00000519072 EVC2Q86UK5 1308 aa19.67■□□□□ 0.74
VDAC3-204ENST00000519072 PEAK1Q9H792 1746 aa19.66■□□□□ 0.74
VDAC3-204ENST00000519072 RNF216Q9NWF9 866 aaPredicted RBP19.66■□□□□ 0.74
VDAC3-204ENST00000519072 WNK3Q9BYP7 1800 aa19.66■□□□□ 0.74
VDAC3-204ENST00000519072 SBF2Q86WG5 1849 aa19.65■□□□□ 0.74
VDAC3-204ENST00000519072 C11orf95C9JLR9 678 aaPredicted RBP19.65■□□□□ 0.74
VDAC3-204ENST00000519072 LRRC37A3O60309 1634 aa19.65■□□□□ 0.74
VDAC3-204ENST00000519072 ZBTB7CA1YPR0 619 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms