RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 PRM3Q9NNZ6 103 aa11□□□□□ -0.65
SQLE-203ENST00000518931 FKBPLQ9UIM3 349 aa11□□□□□ -0.65
SQLE-203ENST00000518931 UBTFP17480 764 aaKnown RBP10.99□□□□□ -0.65
SQLE-203ENST00000518931 PNMA1Q8ND90 353 aa10.99□□□□□ -0.65
SQLE-203ENST00000518931 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
SQLE-203ENST00000518931 SH3BP2P78314 561 aa10.98□□□□□ -0.65
SQLE-203ENST00000518931 TBC1D2BQ9UPU7 963 aa10.98□□□□□ -0.65
SQLE-203ENST00000518931 RGS20O76081 388 aa10.97□□□□□ -0.65
SQLE-203ENST00000518931 ZNF598Q86UK7 904 aaKnown RBP10.97□□□□□ -0.65
SQLE-203ENST00000518931 GDPD2Q9HCC8 539 aa10.97□□□□□ -0.65
SQLE-203ENST00000518931 SKOR1P84550 965 aa10.96□□□□□ -0.65
SQLE-203ENST00000518931 NBPF14Q5TI25 921 aa10.96□□□□□ -0.65
SQLE-203ENST00000518931 ZNF511Q8NB15 262 aa10.96□□□□□ -0.65
SQLE-203ENST00000518931 POM121Q96HA1 1249 aa10.96□□□□□ -0.65
SQLE-203ENST00000518931 RAD21O60216 631 aa10.95□□□□□ -0.66
SQLE-203ENST00000518931 ZNF697Q5TEC3 545 aa10.95□□□□□ -0.66
SQLE-203ENST00000518931 GPKOWQ92917 476 aaPredicted RBP eCLIP10.95□□□□□ -0.664e-7■□□□□ 10.6
SQLE-203ENST00000518931 COG6Q9Y2V7 657 aa10.95□□□□□ -0.66
SQLE-203ENST00000518931 ABL2P42684 1182 aa10.94□□□□□ -0.66
SQLE-203ENST00000518931 WNT7BP56706 349 aa10.94□□□□□ -0.66
SQLE-203ENST00000518931 AGERQ15109 404 aa10.94□□□□□ -0.66
SQLE-203ENST00000518931 PDXDC2PQ6P474 469 aa10.94□□□□□ -0.66
SQLE-203ENST00000518931 FOXJ1Q92949 421 aa10.94□□□□□ -0.66
SQLE-203ENST00000518931 ZC3H4Q9UPT8 1303 aaKnown RBP10.93□□□□□ -0.66
SQLE-203ENST00000518931 CLUAP1Q96AJ1 413 aa10.93□□□□□ -0.66
SQLE-203ENST00000518931 RC3H1Q5TC82 1133 aaKnown RBP10.92□□□□□ -0.66
SQLE-203ENST00000518931 GPR37L1O60883 481 aa10.91□□□□□ -0.66
SQLE-203ENST00000518931 PTK2Q05397 1052 aa10.91□□□□□ -0.66
SQLE-203ENST00000518931 FOXC1Q12948 553 aa10.91□□□□□ -0.66
SQLE-203ENST00000518931 BPHLQ86WA6 291 aaPredicted RBP10.91□□□□□ -0.66
SQLE-203ENST00000518931 SH3BP5LQ7L8J4 393 aa10.9□□□□□ -0.66
SQLE-203ENST00000518931 EHBP1Q8NDI1 1231 aa10.9□□□□□ -0.66
SQLE-203ENST00000518931 ARHGAP9Q9BRR9 750 aa10.9□□□□□ -0.66
SQLE-203ENST00000518931 MAGEB6P1A0A0J9YX57 407 aa10.89□□□□□ -0.67
SQLE-203ENST00000518931 C4orf48Q5BLP8 95 aa10.89□□□□□ -0.67
SQLE-203ENST00000518931 WNT7AO00755 349 aa10.88□□□□□ -0.67
SQLE-203ENST00000518931 IRF5Q13568 498 aa10.88□□□□□ -0.67
SQLE-203ENST00000518931 SH3RF1Q7Z6J0 888 aa10.88□□□□□ -0.67
SQLE-203ENST00000518931 ZBTB33Q86T24 672 aa10.88□□□□□ -0.67
SQLE-203ENST00000518931 MRGPRX2Q96LB1 330 aa10.88□□□□□ -0.67
SQLE-203ENST00000518931 CARD14Q9BXL6 1004 aa10.88□□□□□ -0.67
SQLE-203ENST00000518931 PKD2L1Q9P0L9 805 aa10.88□□□□□ -0.67
SQLE-203ENST00000518931 GPSM3Q9Y4H4 160 aa10.88□□□□□ -0.67
SQLE-203ENST00000518931 ZBBXA8MT70 800 aa10.87□□□□□ -0.67
SQLE-203ENST00000518931 VARSP26640 1264 aaKnown RBP10.87□□□□□ -0.67
SQLE-203ENST00000518931 OCSTAMPQ9BR26 566 aa10.87□□□□□ -0.67
SQLE-203ENST00000518931 FBXO45P0C2W1 286 aa10.86□□□□□ -0.67
SQLE-203ENST00000518931 C14orf37Q86TY3 774 aa10.86□□□□□ -0.67
SQLE-203ENST00000518931 TNFRSF10AO00220 468 aa10.85□□□□□ -0.67
SQLE-203ENST00000518931 GDF9O60383 454 aa10.85□□□□□ -0.67
SQLE-203ENST00000518931 A6NJR5 290 aa10.84□□□□□ -0.67
SQLE-203ENST00000518931 NR1H3Q13133 447 aa10.84□□□□□ -0.67
SQLE-203ENST00000518931 TRIM67Q6ZTA4 783 aa10.84□□□□□ -0.67
SQLE-203ENST00000518931 WWC1Q8IX03 1113 aa10.84□□□□□ -0.67
SQLE-203ENST00000518931 ADAM32Q8TC27 787 aa10.84□□□□□ -0.67
SQLE-203ENST00000518931 ZMYND15Q9H091 742 aa10.84□□□□□ -0.67
SQLE-203ENST00000518931 VAC14Q08AM6 782 aa10.83□□□□□ -0.68
SQLE-203ENST00000518931 WASHC4Q2M389 1173 aa10.83□□□□□ -0.68
SQLE-203ENST00000518931 FAM174AQ8TBP5 190 aa10.83□□□□□ -0.68
SQLE-203ENST00000518931 SIAH2O43255 324 aa10.82□□□□□ -0.68
SQLE-203ENST00000518931 ERFEQ4G0M1 354 aa10.82□□□□□ -0.68
SQLE-203ENST00000518931 PROSER2Q86WR7 435 aaPredicted RBP10.82□□□□□ -0.68
SQLE-203ENST00000518931 ARID5BQ14865 1188 aa10.81□□□□□ -0.68
SQLE-203ENST00000518931 C1QTNF2Q9BXJ5 285 aa10.81□□□□□ -0.68
SQLE-203ENST00000518931 PDZRN3Q9UPQ7 1066 aa10.81□□□□□ -0.68
SQLE-203ENST00000518931 CYP4X1Q8N118 509 aa10.8□□□□□ -0.68
SQLE-203ENST00000518931 FNBP4Q8N3X1 1017 aaPredicted RBP10.8□□□□□ -0.68
SQLE-203ENST00000518931 ZNF330Q9Y3S2 320 aaPredicted RBP10.8□□□□□ -0.68
SQLE-203ENST00000518931 TTC24A2A3L6 582 aaPredicted RBP10.79□□□□□ -0.68
SQLE-203ENST00000518931 PRR20EP86478 221 aa10.79□□□□□ -0.68
SQLE-203ENST00000518931 PRR20CP86479 221 aa10.79□□□□□ -0.68
SQLE-203ENST00000518931 PRR20DP86480 221 aa10.79□□□□□ -0.68
SQLE-203ENST00000518931 PRR20BP86481 221 aa10.79□□□□□ -0.68
SQLE-203ENST00000518931 PRR20AP86496 221 aa10.79□□□□□ -0.68
SQLE-203ENST00000518931 DZIP3Q86Y13 1208 aaKnown RBP10.79□□□□□ -0.68
SQLE-203ENST00000518931 SNIP1Q8TAD8 396 aaKnown RBP10.79□□□□□ -0.68
SQLE-203ENST00000518931 PCDHB9Q9Y5E1 797 aa10.79□□□□□ -0.68
SQLE-203ENST00000518931 GFRA3O60609 400 aa10.78□□□□□ -0.68
SQLE-203ENST00000518931 TRMT44Q8IYL2 757 aaKnown RBP10.78□□□□□ -0.68
SQLE-203ENST00000518931 TLL2Q9Y6L7 1015 aa10.78□□□□□ -0.68
SQLE-203ENST00000518931 ALDH1A1P00352 501 aa10.77□□□□□ -0.69
SQLE-203ENST00000518931 EIF4G2P78344 907 aaKnown RBP eCLIP10.77□□□□□ -0.69
SQLE-203ENST00000518931 ERICH6Q7L0X2 663 aa10.77□□□□□ -0.69
SQLE-203ENST00000518931 SLC10A4Q96EP9 437 aa10.77□□□□□ -0.69
SQLE-203ENST00000518931 TOR4AQ9NXH8 423 aa10.77□□□□□ -0.69
SQLE-203ENST00000518931 TRAK2O60296 914 aa10.76□□□□□ -0.69
SQLE-203ENST00000518931 MPNDQ8N594 471 aa10.76□□□□□ -0.69
SQLE-203ENST00000518931 CDK15Q96Q40 435 aa10.76□□□□□ -0.69
SQLE-203ENST00000518931 TIMELESSQ9UNS1 1208 aa10.76□□□□□ -0.69
SQLE-203ENST00000518931 POM121CA8CG34 1229 aa10.75□□□□□ -0.69
SQLE-203ENST00000518931 VASH1Q7L8A9 365 aaPredicted RBP10.75□□□□□ -0.69
SQLE-203ENST00000518931 J3QL48 77 aa10.74□□□□□ -0.69
SQLE-203ENST00000518931 MCCD1P59942 119 aaPredicted RBP10.74□□□□□ -0.69
SQLE-203ENST00000518931 ARXQ96QS3 562 aa10.74□□□□□ -0.69
SQLE-203ENST00000518931 GRM5P41594 1212 aa10.73□□□□□ -0.69
SQLE-203ENST00000518931 SEMA3FQ13275 785 aa10.73□□□□□ -0.69
SQLE-203ENST00000518931 CDV3Q9UKY7 258 aaKnown RBP10.73□□□□□ -0.69
SQLE-203ENST00000518931 WASF2Q9Y6W5 498 aa10.73□□□□□ -0.69
SQLE-203ENST00000518931 KCTD15Q96SI1 283 aaPredicted RBP10.72□□□□□ -0.69
SQLE-203ENST00000518931 ZNF777Q9ULD5 760 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms