RNA–Protein interactions for RNA: ENST00000518842.1

LAMA4-211, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 480 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-211ENST00000518842 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
LAMA4-211ENST00000518842 LAMC1P11047 1609 aa13.22□□□□□ -0.29
LAMA4-211ENST00000518842 TMEM132EQ6IEE7 984 aa13.22□□□□□ -0.29
LAMA4-211ENST00000518842 SIRT1Q96EB6 747 aa13.22□□□□□ -0.29
LAMA4-211ENST00000518842 SHPRHQ149N8 1683 aa13.21□□□□□ -0.29
LAMA4-211ENST00000518842 PLEKHH1Q9ULM0 1364 aa13.21□□□□□ -0.29
LAMA4-211ENST00000518842 POTEAQ6S8J7 498 aa13.21□□□□□ -0.29
LAMA4-211ENST00000518842 KNDC1Q76NI1 1749 aa13.2□□□□□ -0.3
LAMA4-211ENST00000518842 CFAP70Q5T0N1 1121 aa13.2□□□□□ -0.3
LAMA4-211ENST00000518842 LCE2DQ5TA82 110 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-211ENST00000518842 WAPLQ7Z5K2 1190 aa13.2□□□□□ -0.3
LAMA4-211ENST00000518842 DDX17Q92841 729 aaKnown RBP13.2□□□□□ -0.3
LAMA4-211ENST00000518842 FAM212AQ96EL1 285 aa13.2□□□□□ -0.3
LAMA4-211ENST00000518842 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
LAMA4-211ENST00000518842 SOS2Q07890 1332 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-211ENST00000518842 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
LAMA4-211ENST00000518842 STK26Q9P289 416 aa13.19□□□□□ -0.3
LAMA4-211ENST00000518842 COLQQ9Y215 455 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-211ENST00000518842 PNPLA6Q8IY17 1366 aa13.19□□□□□ -0.3
LAMA4-211ENST00000518842 LRRC59Q96AG4 307 aaKnown RBP13.18□□□□□ -0.3
LAMA4-211ENST00000518842 ADGRB1O14514 1584 aa13.18□□□□□ -0.3
LAMA4-211ENST00000518842 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
LAMA4-211ENST00000518842 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
LAMA4-211ENST00000518842 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
LAMA4-211ENST00000518842 PXDNQ92626 1479 aa13.14□□□□□ -0.31
LAMA4-211ENST00000518842 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
LAMA4-211ENST00000518842 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
LAMA4-211ENST00000518842 ESCO1Q5FWF5 840 aa13.12□□□□□ -0.31
LAMA4-211ENST00000518842 DCAF11Q8TEB1 546 aa13.12□□□□□ -0.31
LAMA4-211ENST00000518842 PRAM1Q96QH2 718 aa13.12□□□□□ -0.31
LAMA4-211ENST00000518842 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
LAMA4-211ENST00000518842 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
LAMA4-211ENST00000518842 MEX3CQ5U5Q3 659 aaKnown RBP13.11□□□□□ -0.31
LAMA4-211ENST00000518842 ZNF772Q68DY9 489 aaPredicted RBP13.11□□□□□ -0.31
LAMA4-211ENST00000518842 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
LAMA4-211ENST00000518842 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
LAMA4-211ENST00000518842 ADGRB2O60241 1585 aa13.1□□□□□ -0.31
LAMA4-211ENST00000518842 FOXO3O43524 673 aa13.09□□□□□ -0.31
LAMA4-211ENST00000518842 TMEM106CQ9BVX2 250 aa13.09□□□□□ -0.31
LAMA4-211ENST00000518842 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
LAMA4-211ENST00000518842 COL22A1Q8NFW1 1626 aaPredicted RBP13.09□□□□□ -0.31
LAMA4-211ENST00000518842 AFF2P51816 1311 aa13.09□□□□□ -0.31
LAMA4-211ENST00000518842 ANKARQ7Z5J8 1434 aa13.08□□□□□ -0.32
LAMA4-211ENST00000518842 NUTM2FA1L443 756 aa13.08□□□□□ -0.32
LAMA4-211ENST00000518842 PLCG2P16885 1265 aa13.07□□□□□ -0.32
LAMA4-211ENST00000518842 FKBP8Q14318 412 aa13.07□□□□□ -0.32
LAMA4-211ENST00000518842 TRAK1Q9UPV9 953 aa13.07□□□□□ -0.32
LAMA4-211ENST00000518842 CDK12Q9NYV4 1490 aaPredicted RBP13.06□□□□□ -0.32
LAMA4-211ENST00000518842 SAFB2Q14151 953 aaKnown RBP eCLIP13.06□□□□□ -0.32
LAMA4-211ENST00000518842 POGKQ9P215 609 aa13.06□□□□□ -0.32
LAMA4-211ENST00000518842 SPATA31A3Q5VYP0 1347 aa13.06□□□□□ -0.32
LAMA4-211ENST00000518842 KIF1AQ12756 1690 aa13.05□□□□□ -0.32
LAMA4-211ENST00000518842 XPCQ01831 940 aaPredicted RBP13.05□□□□□ -0.32
LAMA4-211ENST00000518842 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
LAMA4-211ENST00000518842 PHF8Q9UPP1 1060 aa13.05□□□□□ -0.32
LAMA4-211ENST00000518842 USP32Q8NFA0 1604 aa13.04□□□□□ -0.32
LAMA4-211ENST00000518842 ADAMTS2O95450 1211 aa13.04□□□□□ -0.32
LAMA4-211ENST00000518842 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
LAMA4-211ENST00000518842 PRR36Q9H6K5 1346 aa13.04□□□□□ -0.32
LAMA4-211ENST00000518842 RXRBP28702 533 aa13.03□□□□□ -0.32
LAMA4-211ENST00000518842 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
LAMA4-211ENST00000518842 SBNO1A3KN83 1393 aa13.03□□□□□ -0.32
LAMA4-211ENST00000518842 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
LAMA4-211ENST00000518842 WASLO00401 505 aaPredicted RBP13.02□□□□□ -0.33
LAMA4-211ENST00000518842 KRT28Q7Z3Y7 464 aa13.02□□□□□ -0.33
LAMA4-211ENST00000518842 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
LAMA4-211ENST00000518842 MINK1Q8N4C8 1332 aaPredicted RBP13.02□□□□□ -0.33
LAMA4-211ENST00000518842 EIF3AQ14152 1382 aaKnown RBP13.02□□□□□ -0.33
LAMA4-211ENST00000518842 TNS3Q68CZ2 1445 aa13.02□□□□□ -0.33
LAMA4-211ENST00000518842 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
LAMA4-211ENST00000518842 HIRIP3Q9BW71 556 aaPredicted RBP13.01□□□□□ -0.33
LAMA4-211ENST00000518842 KIAA1210Q9ULL0 1709 aa13□□□□□ -0.33
LAMA4-211ENST00000518842 RGS12O14924 1447 aa13□□□□□ -0.33
LAMA4-211ENST00000518842 ATRNO75882 1429 aa13□□□□□ -0.33
LAMA4-211ENST00000518842 RBM6P78332 1123 aaKnown RBP13□□□□□ -0.33
LAMA4-211ENST00000518842 IRX5P78411 483 aaPredicted RBP13□□□□□ -0.33
LAMA4-211ENST00000518842 NBPF1Q3BBV0 1214 aa13□□□□□ -0.33
LAMA4-211ENST00000518842 DCAF8Q5TAQ9 597 aa13□□□□□ -0.33
LAMA4-211ENST00000518842 QTRT2Q9H974 415 aaKnown RBP13□□□□□ -0.33
LAMA4-211ENST00000518842 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
LAMA4-211ENST00000518842 ATP7BP35670 1465 aa12.99□□□□□ -0.33
LAMA4-211ENST00000518842 BCL9LQ86UU0 1499 aa12.99□□□□□ -0.33
LAMA4-211ENST00000518842 PSME1Q06323 249 aa12.99□□□□□ -0.33
LAMA4-211ENST00000518842 L3MBTL2Q969R5 705 aa12.99□□□□□ -0.33
LAMA4-211ENST00000518842 PMFBP1Q8TBY8 1022 aa12.98□□□□□ -0.33
LAMA4-211ENST00000518842 USP21Q9UK80 565 aa12.98□□□□□ -0.33
LAMA4-211ENST00000518842 SLIT2O94813 1529 aa12.98□□□□□ -0.33
LAMA4-211ENST00000518842 ARHGEF10O15013 1369 aa12.97□□□□□ -0.33
LAMA4-211ENST00000518842 SIN3AQ96ST3 1273 aa12.97□□□□□ -0.33
LAMA4-211ENST00000518842 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
LAMA4-211ENST00000518842 TRPC5Q9UL62 973 aaPredicted RBP12.97□□□□□ -0.33
LAMA4-211ENST00000518842 RGPD8O14715 1765 aaPredicted RBP12.95□□□□□ -0.34
LAMA4-211ENST00000518842 CDAN1Q8IWY9 1227 aa12.95□□□□□ -0.34
LAMA4-211ENST00000518842 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
LAMA4-211ENST00000518842 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
LAMA4-211ENST00000518842 TRPM3Q9HCF6 1732 aaPredicted RBP12.95□□□□□ -0.34
LAMA4-211ENST00000518842 CDK19Q9BWU1 502 aa12.94□□□□□ -0.34
LAMA4-211ENST00000518842 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
LAMA4-211ENST00000518842 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
LAMA4-211ENST00000518842 PYGBP11216 843 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms