RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 NGDNQ8NEJ9 315 aaKnown RBP20.1■□□□□ 0.81
TRAPPC9-205ENST00000518839 SSH2Q76I76 1423 aa20.1■□□□□ 0.81
TRAPPC9-205ENST00000518839 MAP2P11137 1827 aaKnown RBP20.09■□□□□ 0.81
TRAPPC9-205ENST00000518839 MTHFSP49914 203 aa20.09■□□□□ 0.81
TRAPPC9-205ENST00000518839 COG3Q96JB2 828 aa20.09■□□□□ 0.81
TRAPPC9-205ENST00000518839 DCCP43146 1447 aa20.09■□□□□ 0.81
TRAPPC9-205ENST00000518839 AATKQ6ZMQ8 1374 aa20.08■□□□□ 0.8
TRAPPC9-205ENST00000518839 KIF1AQ12756 1690 aa20.07■□□□□ 0.8
TRAPPC9-205ENST00000518839 C19orf44Q9H6X5 657 aa20.07■□□□□ 0.8
TRAPPC9-205ENST00000518839 NME9Q86XW9 330 aa20.06■□□□□ 0.8
TRAPPC9-205ENST00000518839 PMFBP1Q8TBY8 1022 aa20.06■□□□□ 0.8
TRAPPC9-205ENST00000518839 ADAMTS8Q9UP79 889 aa20.06■□□□□ 0.8
TRAPPC9-205ENST00000518839 PHF8Q9UPP1 1060 aa20.06■□□□□ 0.8
TRAPPC9-205ENST00000518839 USP54Q70EL1 1684 aa20.06■□□□□ 0.8
TRAPPC9-205ENST00000518839 OVOS2A0A0J9YW53 1432 aa20.04■□□□□ 0.8
TRAPPC9-205ENST00000518839 OVOS2Q6IE36 1432 aa20.04■□□□□ 0.8
TRAPPC9-205ENST00000518839 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
TRAPPC9-205ENST00000518839 TMEM94Q12767 1356 aa20.04■□□□□ 0.8
TRAPPC9-205ENST00000518839 SMG6Q86US8 1419 aaKnown RBP20.03■□□□□ 0.8
TRAPPC9-205ENST00000518839 LRRC7Q96NW7 1537 aa20.03■□□□□ 0.8
TRAPPC9-205ENST00000518839 USP31Q70CQ4 1352 aa20.03■□□□□ 0.8
TRAPPC9-205ENST00000518839 NGEFQ8N5V2 710 aa20.02■□□□□ 0.8
TRAPPC9-205ENST00000518839 RBM33Q96EV2 1170 aaKnown RBP20.02■□□□□ 0.8
TRAPPC9-205ENST00000518839 NUDCQ9Y266 331 aa20.02■□□□□ 0.8
TRAPPC9-205ENST00000518839 COL3A1P02461 1466 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC9-205ENST00000518839 PIK3C2AO00443 1686 aa20.01■□□□□ 0.79
TRAPPC9-205ENST00000518839 CDK12Q9NYV4 1490 aaPredicted RBP20.01■□□□□ 0.79
TRAPPC9-205ENST00000518839 PNPLA6Q8IY17 1366 aa20.01■□□□□ 0.79
TRAPPC9-205ENST00000518839 XIRP1Q702N8 1843 aaKnown RBP20.01■□□□□ 0.79
TRAPPC9-205ENST00000518839 ATF3P18847 181 aa20■□□□□ 0.79
TRAPPC9-205ENST00000518839 PDE3BQ13370 1112 aa20■□□□□ 0.79
TRAPPC9-205ENST00000518839 MSH6P52701 1360 aa19.99■□□□□ 0.79
TRAPPC9-205ENST00000518839 ESCO1Q5FWF5 840 aa19.99■□□□□ 0.79
TRAPPC9-205ENST00000518839 C1orf167Q5SNV9 1468 aa19.99■□□□□ 0.79
TRAPPC9-205ENST00000518839 CADPS2Q86UW7 1296 aa19.98■□□□□ 0.79
TRAPPC9-205ENST00000518839 POLKQ9UBT6 870 aa19.98■□□□□ 0.79
TRAPPC9-205ENST00000518839 ZRANB1Q9UGI0 708 aa19.97■□□□□ 0.79
TRAPPC9-205ENST00000518839 MST1RQ04912 1400 aa19.96■□□□□ 0.79
TRAPPC9-205ENST00000518839 DIAPH1O60610 1272 aaKnown RBP19.96■□□□□ 0.79
TRAPPC9-205ENST00000518839 PNNQ9H307 717 aaKnown RBP19.95■□□□□ 0.78
TRAPPC9-205ENST00000518839 MARF1Q9Y4F3 1742 aaKnown RBP19.94■□□□□ 0.78
TRAPPC9-205ENST00000518839 PSME1Q06323 249 aa19.94■□□□□ 0.78
TRAPPC9-205ENST00000518839 RUNDC1Q96C34 613 aa19.93■□□□□ 0.78
TRAPPC9-205ENST00000518839 U2AF1L5P0DN76 240 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC9-205ENST00000518839 U2AF1Q01081 240 aaKnown RBP eCLIP19.92■□□□□ 0.78
TRAPPC9-205ENST00000518839 NCBP3Q53F19 620 aaKnown RBP19.92■□□□□ 0.78
TRAPPC9-205ENST00000518839 GTF3C3Q9Y5Q9 886 aa19.92■□□□□ 0.78
TRAPPC9-205ENST00000518839 TRPM3Q9HCF6 1732 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC9-205ENST00000518839 KIF24Q5T7B8 1368 aa19.91■□□□□ 0.78
TRAPPC9-205ENST00000518839 PPM1GO15355 546 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC9-205ENST00000518839 PAK3O75914 559 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC9-205ENST00000518839 NLRP6P59044 892 aa19.9■□□□□ 0.78
TRAPPC9-205ENST00000518839 ABTB2Q8N961 1025 aa19.9■□□□□ 0.78
TRAPPC9-205ENST00000518839 ORAI2Q96SN7 254 aa19.9■□□□□ 0.78
TRAPPC9-205ENST00000518839 EMILIN1Q9Y6C2 1016 aa19.9■□□□□ 0.78
TRAPPC9-205ENST00000518839 ZNF335Q9H4Z2 1342 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC9-205ENST00000518839 U2SURPO15042 1029 aaKnown RBP19.89■□□□□ 0.77
TRAPPC9-205ENST00000518839 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.77
TRAPPC9-205ENST00000518839 IQSEC2Q5JU85 1478 aa19.88■□□□□ 0.77
TRAPPC9-205ENST00000518839 APAF1O14727 1248 aa19.88■□□□□ 0.77
TRAPPC9-205ENST00000518839 RRS1Q15050 365 aaKnown RBP19.87■□□□□ 0.77
TRAPPC9-205ENST00000518839 SBNO1A3KN83 1393 aa19.86■□□□□ 0.77
TRAPPC9-205ENST00000518839 PEAK1Q9H792 1746 aa19.86■□□□□ 0.77
TRAPPC9-205ENST00000518839 SALL2Q9Y467 1007 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC9-205ENST00000518839 FLT4P35916 1363 aa19.85■□□□□ 0.77
TRAPPC9-205ENST00000518839 ZNF521Q96K83 1311 aa19.85■□□□□ 0.77
TRAPPC9-205ENST00000518839 FOXO3O43524 673 aa19.85■□□□□ 0.77
TRAPPC9-205ENST00000518839 FCHSD2O94868 740 aa19.85■□□□□ 0.77
TRAPPC9-205ENST00000518839 FBLN1P23142 703 aa19.85■□□□□ 0.77
TRAPPC9-205ENST00000518839 ALS2Q96Q42 1657 aa19.84■□□□□ 0.77
TRAPPC9-205ENST00000518839 NPHP3Q7Z494 1330 aa19.84■□□□□ 0.77
TRAPPC9-205ENST00000518839 MAPK8IP3Q9UPT6 1336 aa19.84■□□□□ 0.77
TRAPPC9-205ENST00000518839 NEFLP07196 543 aa19.84■□□□□ 0.77
TRAPPC9-205ENST00000518839 NEFMP07197 916 aa19.84■□□□□ 0.77
TRAPPC9-205ENST00000518839 IL13P35225 146 aa19.84■□□□□ 0.77
TRAPPC9-205ENST00000518839 KRT28Q7Z3Y7 464 aa19.84■□□□□ 0.77
TRAPPC9-205ENST00000518839 KCNH5Q8NCM2 988 aa19.84■□□□□ 0.77
TRAPPC9-205ENST00000518839 LTN1O94822 1766 aa19.83■□□□□ 0.77
TRAPPC9-205ENST00000518839 RTL1A6NKG5 1358 aa19.83■□□□□ 0.76
TRAPPC9-205ENST00000518839 SLIT3O75094 1523 aa19.82■□□□□ 0.76
TRAPPC9-205ENST00000518839 MAP3K19Q56UN5 1328 aa19.82■□□□□ 0.76
TRAPPC9-205ENST00000518839 SENP3-EIF4A1A0A087X0R7 540 aa19.82■□□□□ 0.76
TRAPPC9-205ENST00000518839 GOLGA2Q08379 1002 aa19.82■□□□□ 0.76
TRAPPC9-205ENST00000518839 CCDC27Q2M243 656 aa19.82■□□□□ 0.76
TRAPPC9-205ENST00000518839 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
TRAPPC9-205ENST00000518839 PHRF1Q9P1Y6 1649 aaKnown RBP19.82■□□□□ 0.76
TRAPPC9-205ENST00000518839 PLEKHF1Q96S99 279 aa19.81■□□□□ 0.76
TRAPPC9-205ENST00000518839 RGPD1P0DJD0 1748 aa19.81■□□□□ 0.76
TRAPPC9-205ENST00000518839 NFAT5O94916 1531 aa19.81■□□□□ 0.76
TRAPPC9-205ENST00000518839 AMPHP49418 695 aa19.8■□□□□ 0.76
TRAPPC9-205ENST00000518839 SOX12O15370 315 aa19.78■□□□□ 0.76
TRAPPC9-205ENST00000518839 EIF4A2Q14240 407 aaKnown RBP19.78■□□□□ 0.76
TRAPPC9-205ENST00000518839 NUTM2GQ5VZR2 741 aa19.78■□□□□ 0.76
TRAPPC9-205ENST00000518839 RSPH6AQ9H0K4 717 aa19.78■□□□□ 0.76
TRAPPC9-205ENST00000518839 USP19O94966 1318 aa19.77■□□□□ 0.76
TRAPPC9-205ENST00000518839 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC9-205ENST00000518839 SUPT16HQ9Y5B9 1047 aaKnown RBP19.77■□□□□ 0.76
TRAPPC9-205ENST00000518839 PXDNQ92626 1479 aa19.77■□□□□ 0.76
TRAPPC9-205ENST00000518839 ARHGEF10O15013 1369 aa19.76■□□□□ 0.75
TRAPPC9-205ENST00000518839 E9PSI1 815 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms