RNA–Protein interactions for RNA: ENST00000518806.1

DENND3-209, Transcript of DENN domain containing 3, humanhuman

TSL 3

Gene DENND3, Length 1,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-209ENST00000518806 TRPM1Q7Z4N2 1603 aa17.89■□□□□ 0.46
DENND3-209ENST00000518806 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.45
DENND3-209ENST00000518806 CCDC9Q9Y3X0 531 aaKnown RBP17.89■□□□□ 0.45
DENND3-209ENST00000518806 RALGAPBQ86X10 1494 aa17.88■□□□□ 0.45
DENND3-209ENST00000518806 CARD11Q9BXL7 1154 aa17.88■□□□□ 0.45
DENND3-209ENST00000518806 BTG4Q9NY30 223 aa17.87■□□□□ 0.45
DENND3-209ENST00000518806 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
DENND3-209ENST00000518806 ZC3H6P61129 1189 aaKnown RBP17.86■□□□□ 0.45
DENND3-209ENST00000518806 CHRNA2Q15822 529 aa17.86■□□□□ 0.45
DENND3-209ENST00000518806 VPS72Q15906 364 aa17.86■□□□□ 0.45
DENND3-209ENST00000518806 ALS2Q96Q42 1657 aa17.86■□□□□ 0.45
DENND3-209ENST00000518806 QRICH2Q9H0J4 1663 aa17.85■□□□□ 0.45
DENND3-209ENST00000518806 ABTB2Q8N961 1025 aa17.85■□□□□ 0.45
DENND3-209ENST00000518806 MARF1Q9Y4F3 1742 aaKnown RBP17.85■□□□□ 0.45
DENND3-209ENST00000518806 TOPAZ1Q8N9V7 1692 aa17.84■□□□□ 0.45
DENND3-209ENST00000518806 PRDM11Q9NQV5 511 aa17.84■□□□□ 0.45
DENND3-209ENST00000518806 ABCA3Q99758 1704 aa17.84■□□□□ 0.45
DENND3-209ENST00000518806 KIAA0232Q92628 1395 aa17.84■□□□□ 0.45
DENND3-209ENST00000518806 GLI3P10071 1580 aa17.83■□□□□ 0.44
DENND3-209ENST00000518806 PCGF6Q9BYE7 350 aa17.82■□□□□ 0.44
DENND3-209ENST00000518806 EP400Q96L91 3159 aa17.82■□□□□ 0.44
DENND3-209ENST00000518806 ITSN1Q15811 1721 aa17.82■□□□□ 0.44
DENND3-209ENST00000518806 SEPT12Q8IYM1 358 aa17.81■□□□□ 0.44
DENND3-209ENST00000518806 ATAD2Q6PL18 1390 aa17.81■□□□□ 0.44
DENND3-209ENST00000518806 A0A0G2JS52 829 aa17.79■□□□□ 0.44
DENND3-209ENST00000518806 MYT1Q01538 1121 aa17.79■□□□□ 0.44
DENND3-209ENST00000518806 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
DENND3-209ENST00000518806 STRN4Q9NRL3 753 aa17.79■□□□□ 0.44
DENND3-209ENST00000518806 PLCH1Q4KWH8 1693 aa17.79■□□□□ 0.44
DENND3-209ENST00000518806 USP6P35125 1406 aa17.79■□□□□ 0.44
DENND3-209ENST00000518806 ZBTB7CA1YPR0 619 aa17.78■□□□□ 0.44
DENND3-209ENST00000518806 USP19O94966 1318 aa17.78■□□□□ 0.44
DENND3-209ENST00000518806 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.77■□□□□ 0.44
DENND3-209ENST00000518806 NLRP13Q86W25 1043 aa17.77■□□□□ 0.44
DENND3-209ENST00000518806 GCP02774 474 aa17.76■□□□□ 0.43
DENND3-209ENST00000518806 NLRP6P59044 892 aa17.76■□□□□ 0.43
DENND3-209ENST00000518806 CRYBG1Q9Y4K1 1723 aa17.75■□□□□ 0.43
DENND3-209ENST00000518806 SPATA31A5Q5VU36 1347 aa17.75■□□□□ 0.43
DENND3-209ENST00000518806 SPATA31A7Q8IWB4 1347 aa17.75■□□□□ 0.43
DENND3-209ENST00000518806 ONECUT3O60422 494 aaPredicted RBP17.74■□□□□ 0.43
DENND3-209ENST00000518806 COL14A1Q05707 1796 aaKnown RBP17.74■□□□□ 0.43
DENND3-209ENST00000518806 SSH2Q76I76 1423 aa17.74■□□□□ 0.43
DENND3-209ENST00000518806 ST20-MTHFSA0A0A6YYL1 179 aa17.73■□□□□ 0.43
DENND3-209ENST00000518806 SOX12O15370 315 aa17.73■□□□□ 0.43
DENND3-209ENST00000518806 FAM182BQ5T319 152 aa17.73■□□□□ 0.43
DENND3-209ENST00000518806 TMC1Q8TDI8 760 aa17.73■□□□□ 0.43
DENND3-209ENST00000518806 USP35Q9P2H5 1018 aa17.73■□□□□ 0.43
DENND3-209ENST00000518806 TTC21BQ7Z4L5 1316 aa17.73■□□□□ 0.43
DENND3-209ENST00000518806 PHRF1Q9P1Y6 1649 aaKnown RBP17.73■□□□□ 0.43
DENND3-209ENST00000518806 EVA1CP58658 441 aa17.72■□□□□ 0.43
DENND3-209ENST00000518806 KRT27Q7Z3Y8 459 aa17.72■□□□□ 0.43
DENND3-209ENST00000518806 ZRANB1Q9UGI0 708 aa17.72■□□□□ 0.43
DENND3-209ENST00000518806 NRAPQ86VF7 1730 aa17.72■□□□□ 0.43
DENND3-209ENST00000518806 NWD2Q9ULI1 1742 aa17.72■□□□□ 0.43
DENND3-209ENST00000518806 LARP1Q6PKG0 1096 aaKnown RBP17.72■□□□□ 0.43
DENND3-209ENST00000518806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.72■□□□□ 0.43
DENND3-209ENST00000518806 SLC12A5Q9H2X9 1139 aa17.72■□□□□ 0.43
DENND3-209ENST00000518806 NRKQ7Z2Y5 1582 aa17.71■□□□□ 0.43
DENND3-209ENST00000518806 SBNO2Q9Y2G9 1366 aa17.71■□□□□ 0.43
DENND3-209ENST00000518806 TESK2Q96S53 571 aa17.71■□□□□ 0.42
DENND3-209ENST00000518806 ZNF692Q9BU19 519 aaPredicted RBP17.71■□□□□ 0.42
DENND3-209ENST00000518806 SPATA31A1Q5TZJ5 1347 aa17.7■□□□□ 0.42
DENND3-209ENST00000518806 BRD4O60885 1362 aaPredicted RBP17.7■□□□□ 0.42
DENND3-209ENST00000518806 KTN1Q86UP2 1357 aaKnown RBP17.7■□□□□ 0.42
DENND3-209ENST00000518806 CPSF1Q10570 1443 aaKnown RBP17.7■□□□□ 0.42
DENND3-209ENST00000518806 CPDO75976 1380 aa17.69■□□□□ 0.42
DENND3-209ENST00000518806 CAMTA1Q9Y6Y1 1673 aa17.69■□□□□ 0.42
DENND3-209ENST00000518806 DEFB132Q7Z7B7 95 aa17.67■□□□□ 0.42
DENND3-209ENST00000518806 NME9Q86XW9 330 aa17.67■□□□□ 0.42
DENND3-209ENST00000518806 CD163L1Q9NR16 1453 aa17.67■□□□□ 0.42
DENND3-209ENST00000518806 AXIN2Q9Y2T1 843 aa17.66■□□□□ 0.42
DENND3-209ENST00000518806 PIK3C2AO00443 1686 aa17.65■□□□□ 0.42
DENND3-209ENST00000518806 TTC21AQ8NDW8 1320 aa17.65■□□□□ 0.42
DENND3-209ENST00000518806 HDGFL2Q7Z4V5 671 aaPredicted RBP17.65■□□□□ 0.42
DENND3-209ENST00000518806 SLIT3O75094 1523 aa17.64■□□□□ 0.41
DENND3-209ENST00000518806 USP47Q96K76 1375 aa17.64■□□□□ 0.41
DENND3-209ENST00000518806 BRWD3Q6RI45 1802 aa17.64■□□□□ 0.41
DENND3-209ENST00000518806 CCDC125Q86Z20 511 aa17.64■□□□□ 0.41
DENND3-209ENST00000518806 SRCAPQ6ZRS2 3230 aa17.63■□□□□ 0.41
DENND3-209ENST00000518806 BLMP54132 1417 aaPredicted RBP17.63■□□□□ 0.41
DENND3-209ENST00000518806 ARHGEF25Q86VW2 580 aa17.63■□□□□ 0.41
DENND3-209ENST00000518806 TCP11L2Q8N4U5 519 aa17.63■□□□□ 0.41
DENND3-209ENST00000518806 A0A1W2PP64 1363 aa17.62■□□□□ 0.41
DENND3-209ENST00000518806 AATKQ6ZMQ8 1374 aa17.62■□□□□ 0.41
DENND3-209ENST00000518806 CCER1Q8TC90 406 aaPredicted RBP17.62■□□□□ 0.41
DENND3-209ENST00000518806 COL5A2P05997 1499 aaPredicted RBP17.62■□□□□ 0.41
DENND3-209ENST00000518806 LMO7Q8WWI1 1683 aa17.62■□□□□ 0.41
DENND3-209ENST00000518806 SF3B2Q13435 895 aaKnown RBP17.61■□□□□ 0.41
DENND3-209ENST00000518806 KCNH5Q8NCM2 988 aa17.61■□□□□ 0.41
DENND3-209ENST00000518806 BARGINQ6ZT62 677 aa17.6■□□□□ 0.41
DENND3-209ENST00000518806 TERF2IPQ9NYB0 399 aa17.6■□□□□ 0.41
DENND3-209ENST00000518806 TOM1L2Q6ZVM7 507 aa17.59■□□□□ 0.41
DENND3-209ENST00000518806 PUS7Q96PZ0 661 aaKnown RBP17.59■□□□□ 0.41
DENND3-209ENST00000518806 THSD7AQ9UPZ6 1657 aa17.59■□□□□ 0.41
DENND3-209ENST00000518806 AKAP12Q02952 1782 aa17.58■□□□□ 0.41
DENND3-209ENST00000518806 CLSPNQ9HAW4 1339 aa17.58■□□□□ 0.41
DENND3-209ENST00000518806 EDC4Q6P2E9 1401 aaKnown RBP17.57■□□□□ 0.4
DENND3-209ENST00000518806 TMF1P82094 1093 aa17.57■□□□□ 0.4
DENND3-209ENST00000518806 USP31Q70CQ4 1352 aa17.57■□□□□ 0.4
DENND3-209ENST00000518806 CRB1P82279 1406 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms