RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 IRF5Q13568 498 aa8.85□□□□□ -0.99
SQLE-202ENST00000518604 MAP10Q9P2G4 905 aa8.85□□□□□ -0.99
SQLE-202ENST00000518604 GPR37L1O60883 481 aa8.84□□□□□ -0.99
SQLE-202ENST00000518604 S1PR4O95977 384 aa8.84□□□□□ -0.99
SQLE-202ENST00000518604 IFFO2Q5TF58 517 aa8.83□□□□□ -1
SQLE-202ENST00000518604 NBPF14Q5TI25 921 aa8.82□□□□□ -1
SQLE-202ENST00000518604 CCDC24Q8N4L8 307 aa8.82□□□□□ -1
SQLE-202ENST00000518604 ZNF777Q9ULD5 760 aaPredicted RBP8.82□□□□□ -1
SQLE-202ENST00000518604 GPSM3Q9Y4H4 160 aa8.82□□□□□ -1
SQLE-202ENST00000518604 SOX11P35716 441 aa8.81□□□□□ -1
SQLE-202ENST00000518604 PDXDC2PQ6P474 469 aa8.81□□□□□ -1
SQLE-202ENST00000518604 FCF1Q9Y324 198 aaKnown RBP8.81□□□□□ -1
SQLE-202ENST00000518604 ANKLE1Q8NAG6 615 aa8.8□□□□□ -1
SQLE-202ENST00000518604 UNC93B1Q9H1C4 597 aa8.8□□□□□ -1
SQLE-202ENST00000518604 ZBBXA8MT70 800 aa8.79□□□□□ -1
SQLE-202ENST00000518604 PTK2Q05397 1052 aa8.79□□□□□ -1
SQLE-202ENST00000518604 NR1H3Q13133 447 aa8.79□□□□□ -1
SQLE-202ENST00000518604 PTCRAQ6ISU1 281 aaPredicted RBP8.79□□□□□ -1
SQLE-202ENST00000518604 RNF223E7ERA6 249 aa8.78□□□□□ -1
SQLE-202ENST00000518604 ZNF592Q92610 1267 aa8.78□□□□□ -1
SQLE-202ENST00000518604 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.78□□□□□ -1
SQLE-202ENST00000518604 ARID3CA6NKF2 412 aa8.77□□□□□ -1.01
SQLE-202ENST00000518604 EIF4G2P78344 907 aaKnown RBP eCLIP8.77□□□□□ -1.01
SQLE-202ENST00000518604 C1orf115Q9H7X2 142 aa8.77□□□□□ -1.01
SQLE-202ENST00000518604 ZBTB24O43167 697 aaPredicted RBP8.76□□□□□ -1.01
SQLE-202ENST00000518604 MCCD1P59942 119 aaPredicted RBP8.76□□□□□ -1.01
SQLE-202ENST00000518604 VAC14Q08AM6 782 aa8.76□□□□□ -1.01
SQLE-202ENST00000518604 PPP1R18Q6NYC8 613 aa8.76□□□□□ -1.01
SQLE-202ENST00000518604 SERPINA10Q9UK55 444 aa8.76□□□□□ -1.01
SQLE-202ENST00000518604 POM121CA8CG34 1229 aa8.75□□□□□ -1.01
SQLE-202ENST00000518604 FBXO45P0C2W1 286 aa8.75□□□□□ -1.01
SQLE-202ENST00000518604 CALR3Q96L12 384 aaKnown RBP8.75□□□□□ -1.01
SQLE-202ENST00000518604 ALG2Q9H553 416 aa8.75□□□□□ -1.01
SQLE-202ENST00000518604 PPEF1O14829 653 aaPredicted RBP8.74□□□□□ -1.01
SQLE-202ENST00000518604 RPIAP49247 311 aa8.74□□□□□ -1.01
SQLE-202ENST00000518604 GLMNQ92990 594 aa8.74□□□□□ -1.01
SQLE-202ENST00000518604 SEMA3FQ13275 785 aa8.73□□□□□ -1.01
SQLE-202ENST00000518604 HDGFL1Q5TGJ6 251 aa8.73□□□□□ -1.01
SQLE-202ENST00000518604 SH3BP5LQ7L8J4 393 aa8.73□□□□□ -1.01
SQLE-202ENST00000518604 BPHLQ86WA6 291 aaPredicted RBP8.73□□□□□ -1.01
SQLE-202ENST00000518604 BAP1Q92560 729 aa8.73□□□□□ -1.01
SQLE-202ENST00000518604 CCDC97Q96F63 343 aaPredicted RBP8.73□□□□□ -1.01
SQLE-202ENST00000518604 ZNF511Q8NB15 262 aa8.72□□□□□ -1.01
SQLE-202ENST00000518604 ARHGAP9Q9BRR9 750 aa8.72□□□□□ -1.01
SQLE-202ENST00000518604 WNT7BP56706 349 aa8.71□□□□□ -1.02
SQLE-202ENST00000518604 SH3RF1Q7Z6J0 888 aa8.71□□□□□ -1.02
SQLE-202ENST00000518604 CCDC82Q8N4S0 544 aa8.71□□□□□ -1.02
SQLE-202ENST00000518604 CD2BP2O95400 341 aaKnown RBP8.7□□□□□ -1.02
SQLE-202ENST00000518604 TRIM32Q13049 653 aa8.7□□□□□ -1.02
SQLE-202ENST00000518604 ZBTB33Q86T24 672 aa8.7□□□□□ -1.02
SQLE-202ENST00000518604 ADAM32Q8TC27 787 aa8.69□□□□□ -1.02
SQLE-202ENST00000518604 ADAMTS19Q8TE59 1207 aa8.69□□□□□ -1.02
SQLE-202ENST00000518604 OCSTAMPQ9BR26 566 aa8.69□□□□□ -1.02
SQLE-202ENST00000518604 RGS20O76081 388 aa8.68□□□□□ -1.02
SQLE-202ENST00000518604 SH3BP2P78314 561 aa8.68□□□□□ -1.02
SQLE-202ENST00000518604 AGERQ15109 404 aa8.68□□□□□ -1.02
SQLE-202ENST00000518604 PLA2G2CQ5R387 149 aa8.68□□□□□ -1.02
SQLE-202ENST00000518604 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
SQLE-202ENST00000518604 ARXQ96QS3 562 aa8.67□□□□□ -1.02
SQLE-202ENST00000518604 FOXJ1Q92949 421 aa8.66□□□□□ -1.02
SQLE-202ENST00000518604 ARID3AQ99856 593 aa8.66□□□□□ -1.02
SQLE-202ENST00000518604 C1QTNF2Q9BXJ5 285 aa8.66□□□□□ -1.02
SQLE-202ENST00000518604 IRX2Q9BZI1 471 aaPredicted RBP8.66□□□□□ -1.02
SQLE-202ENST00000518604 CDV3Q9UKY7 258 aaKnown RBP8.66□□□□□ -1.02
SQLE-202ENST00000518604 A0A0G2JS52 829 aa8.65□□□□□ -1.02
SQLE-202ENST00000518604 MAGEB6P1A0A0J9YX57 407 aa8.65□□□□□ -1.02
SQLE-202ENST00000518604 VARSP26640 1264 aaKnown RBP8.65□□□□□ -1.02
SQLE-202ENST00000518604 ERFEQ4G0M1 354 aa8.65□□□□□ -1.02
SQLE-202ENST00000518604 DZIP3Q86Y13 1208 aaKnown RBP8.65□□□□□ -1.02
SQLE-202ENST00000518604 TRMT44Q8IYL2 757 aaKnown RBP8.65□□□□□ -1.02
SQLE-202ENST00000518604 NFATC2IPQ8NCF5 419 aa8.65□□□□□ -1.02
SQLE-202ENST00000518604 PCDHB9Q9Y5E1 797 aa8.65□□□□□ -1.02
SQLE-202ENST00000518604 SLC19A1P41440 591 aa8.64□□□□□ -1.03
SQLE-202ENST00000518604 C4orf48Q5BLP8 95 aa8.64□□□□□ -1.03
SQLE-202ENST00000518604 LIAT1Q6ZQX7 453 aa8.64□□□□□ -1.03
SQLE-202ENST00000518604 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
SQLE-202ENST00000518604 CARD14Q9BXL6 1004 aa8.64□□□□□ -1.03
SQLE-202ENST00000518604 PPP1R12CQ9BZL4 782 aa8.64□□□□□ -1.03
SQLE-202ENST00000518604 CEP126Q9P2H0 1117 aa8.64□□□□□ -1.03
SQLE-202ENST00000518604 SKOR1P84550 965 aa8.63□□□□□ -1.03
SQLE-202ENST00000518604 FAM174AQ8TBP5 190 aa8.63□□□□□ -1.03
SQLE-202ENST00000518604 SLC10A4Q96EP9 437 aa8.62□□□□□ -1.03
SQLE-202ENST00000518604 PPP1R15AO75807 674 aaPredicted RBP8.61□□□□□ -1.03
SQLE-202ENST00000518604 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
SQLE-202ENST00000518604 SLFNL1Q499Z3 407 aa8.61□□□□□ -1.03
SQLE-202ENST00000518604 RC3H1Q5TC82 1133 aaKnown RBP8.61□□□□□ -1.03
SQLE-202ENST00000518604 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
SQLE-202ENST00000518604 MPNDQ8N594 471 aa8.61□□□□□ -1.03
SQLE-202ENST00000518604 EMID1Q96A84 441 aaPredicted RBP8.61□□□□□ -1.03
SQLE-202ENST00000518604 UCN2Q96RP3 112 aa8.61□□□□□ -1.03
SQLE-202ENST00000518604 V9GY48 417 aaPredicted RBP8.61□□□□□ -1.03
SQLE-202ENST00000518604 PALM3A6NDB9 673 aaPredicted RBP8.6□□□□□ -1.03
SQLE-202ENST00000518604 SPRYD7Q5W111 196 aa8.6□□□□□ -1.03
SQLE-202ENST00000518604 PHTF2Q8N3S3 785 aa8.6□□□□□ -1.03
SQLE-202ENST00000518604 EHBP1Q8NDI1 1231 aa8.6□□□□□ -1.03
SQLE-202ENST00000518604 TFIP11Q9UBB9 837 aaKnown RBP8.6□□□□□ -1.03
SQLE-202ENST00000518604 MAP4K5Q9Y4K4 846 aa8.6□□□□□ -1.03
SQLE-202ENST00000518604 ATP9BO43861 1147 aa8.59□□□□□ -1.03
SQLE-202ENST00000518604 LZTS3O60299 673 aaPredicted RBP8.59□□□□□ -1.03
SQLE-202ENST00000518604 SEPT12Q8IYM1 358 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms