RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 PROSER2Q86WR7 435 aaPredicted RBP23.96■■□□□ 1.43
SDC2-202ENST00000518385 NKTRP30414 1462 aaKnown RBP23.96■■□□□ 1.43
SDC2-202ENST00000518385 USP35Q9P2H5 1018 aa23.95■■□□□ 1.43
SDC2-202ENST00000518385 PLEKHG3A1L390 1219 aa23.95■■□□□ 1.42
SDC2-202ENST00000518385 CPSF1Q10570 1443 aaKnown RBP23.95■■□□□ 1.42
SDC2-202ENST00000518385 ADGRL3Q9HAR2 1447 aa23.94■■□□□ 1.42
SDC2-202ENST00000518385 RBM33Q96EV2 1170 aaKnown RBP23.94■■□□□ 1.42
SDC2-202ENST00000518385 CFAP53Q96M91 514 aa23.93■■□□□ 1.42
SDC2-202ENST00000518385 NALCNQ8IZF0 1738 aa23.93■■□□□ 1.42
SDC2-202ENST00000518385 ANKARQ7Z5J8 1434 aa23.92■■□□□ 1.42
SDC2-202ENST00000518385 NUTM2FA1L443 756 aa23.92■■□□□ 1.42
SDC2-202ENST00000518385 TOPAZ1Q8N9V7 1692 aa23.91■■□□□ 1.42
SDC2-202ENST00000518385 ZNF692Q9BU19 519 aaPredicted RBP23.91■■□□□ 1.42
SDC2-202ENST00000518385 RCAN3Q9UKA8 241 aa23.91■■□□□ 1.42
SDC2-202ENST00000518385 CDC42BPGQ6DT37 1551 aa23.91■■□□□ 1.42
SDC2-202ENST00000518385 STRCP1A6NGW2 1772 aa23.91■■□□□ 1.42
SDC2-202ENST00000518385 ANKRD26Q9UPS8 1709 aa23.91■■□□□ 1.42
SDC2-202ENST00000518385 FMN2Q9NZ56 1722 aa23.9■■□□□ 1.42
SDC2-202ENST00000518385 DMRT2Q9Y5R5 561 aa23.89■■□□□ 1.41
SDC2-202ENST00000518385 NCOA3Q9Y6Q9 1424 aa23.89■■□□□ 1.41
SDC2-202ENST00000518385 C14orf37Q86TY3 774 aa23.87■■□□□ 1.41
SDC2-202ENST00000518385 ACEP12821 1306 aa23.86■■□□□ 1.41
SDC2-202ENST00000518385 EDC4Q6P2E9 1401 aaKnown RBP23.86■■□□□ 1.41
SDC2-202ENST00000518385 FYB1O15117 783 aa23.86■■□□□ 1.41
SDC2-202ENST00000518385 NCBP3Q53F19 620 aaKnown RBP23.86■■□□□ 1.41
SDC2-202ENST00000518385 C19orf44Q9H6X5 657 aa23.86■■□□□ 1.41
SDC2-202ENST00000518385 ITSN1Q15811 1721 aa23.86■■□□□ 1.41
SDC2-202ENST00000518385 RGPD8O14715 1765 aaPredicted RBP23.85■■□□□ 1.41
SDC2-202ENST00000518385 AKAP12Q02952 1782 aa23.85■■□□□ 1.41
SDC2-202ENST00000518385 ZNF521Q96K83 1311 aa23.85■■□□□ 1.41
SDC2-202ENST00000518385 PAK3O75914 559 aaPredicted RBP23.85■■□□□ 1.41
SDC2-202ENST00000518385 TMEM94Q12767 1356 aa23.84■■□□□ 1.41
SDC2-202ENST00000518385 MTHFSP49914 203 aa23.84■■□□□ 1.41
SDC2-202ENST00000518385 DDRGK1Q96HY6 314 aa23.83■■□□□ 1.41
SDC2-202ENST00000518385 SALL2Q9Y467 1007 aaPredicted RBP23.83■■□□□ 1.41
SDC2-202ENST00000518385 SHPRHQ149N8 1683 aa23.83■■□□□ 1.41
SDC2-202ENST00000518385 MON2Q7Z3U7 1717 aa23.83■■□□□ 1.4
SDC2-202ENST00000518385 PPM1GO15355 546 aaPredicted RBP23.82■■□□□ 1.4
SDC2-202ENST00000518385 KIF20BQ96Q89 1820 aa23.82■■□□□ 1.4
SDC2-202ENST00000518385 GOLGA2Q08379 1002 aa23.81■■□□□ 1.4
SDC2-202ENST00000518385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.81■■□□□ 1.43e-8■■□□□ 13.2
SDC2-202ENST00000518385 PMFBP1Q8TBY8 1022 aa23.81■■□□□ 1.4
SDC2-202ENST00000518385 GGNBP2Q9H3C7 697 aa23.81■■□□□ 1.4
SDC2-202ENST00000518385 ZNF335Q9H4Z2 1342 aaPredicted RBP23.8■■□□□ 1.4
SDC2-202ENST00000518385 TNNT2P45379 298 aaPredicted RBP23.79■■□□□ 1.4
SDC2-202ENST00000518385 NGDNQ8NEJ9 315 aaKnown RBP23.79■■□□□ 1.4
SDC2-202ENST00000518385 BACH2Q9BYV9 841 aa23.79■■□□□ 1.4
SDC2-202ENST00000518385 RUNDC1Q96C34 613 aa23.78■■□□□ 1.4
SDC2-202ENST00000518385 USP6P35125 1406 aa23.78■■□□□ 1.4
SDC2-202ENST00000518385 SENP3-EIF4A1A0A087X0R7 540 aa23.78■■□□□ 1.4
SDC2-202ENST00000518385 CDCA7LQ96GN5 454 aa23.78■■□□□ 1.4
SDC2-202ENST00000518385 PDE4AP27815 886 aa23.77■■□□□ 1.4
SDC2-202ENST00000518385 PHF8Q9UPP1 1060 aa23.77■■□□□ 1.4
SDC2-202ENST00000518385 TTC21BQ7Z4L5 1316 aa23.77■■□□□ 1.4
SDC2-202ENST00000518385 DCCP43146 1447 aa23.76■■□□□ 1.39
SDC2-202ENST00000518385 SSH2Q76I76 1423 aa23.76■■□□□ 1.39
SDC2-202ENST00000518385 APAF1O14727 1248 aa23.76■■□□□ 1.39
SDC2-202ENST00000518385 EXOC6Q8TAG9 804 aa23.75■■□□□ 1.39
SDC2-202ENST00000518385 LRRC7Q96NW7 1537 aa23.75■■□□□ 1.39
SDC2-202ENST00000518385 ATF3P18847 181 aa23.74■■□□□ 1.39
SDC2-202ENST00000518385 TRMT2AQ8IZ69 625 aaKnown RBP23.74■■□□□ 1.39
SDC2-202ENST00000518385 SLFN5Q08AF3 891 aa23.74■■□□□ 1.39
SDC2-202ENST00000518385 ESCO1Q5FWF5 840 aa23.74■■□□□ 1.39
SDC2-202ENST00000518385 NME9Q86XW9 330 aa23.74■■□□□ 1.39
SDC2-202ENST00000518385 CCDC146Q8IYE0 955 aa23.74■■□□□ 1.39
SDC2-202ENST00000518385 NRKQ7Z2Y5 1582 aa23.73■■□□□ 1.39
SDC2-202ENST00000518385 PNPLA6Q8IY17 1366 aa23.73■■□□□ 1.39
SDC2-202ENST00000518385 XIRP1Q702N8 1843 aaKnown RBP23.73■■□□□ 1.39
SDC2-202ENST00000518385 TTC21AQ8NDW8 1320 aa23.72■■□□□ 1.39
SDC2-202ENST00000518385 NBR1Q14596 966 aa23.72■■□□□ 1.39
SDC2-202ENST00000518385 DUSP27Q5VZP5 1158 aa23.72■■□□□ 1.39
SDC2-202ENST00000518385 C1orf167Q5SNV9 1468 aa23.71■■□□□ 1.39
SDC2-202ENST00000518385 MSH6P52701 1360 aa23.71■■□□□ 1.39
SDC2-202ENST00000518385 E9PSI1 815 aa23.71■■□□□ 1.39
SDC2-202ENST00000518385 CCDC27Q2M243 656 aa23.71■■□□□ 1.39
SDC2-202ENST00000518385 CADPS2Q86UW7 1296 aa23.71■■□□□ 1.39
SDC2-202ENST00000518385 PNNQ9H307 717 aaKnown RBP23.7■■□□□ 1.38
SDC2-202ENST00000518385 COL3A1P02461 1466 aaPredicted RBP23.7■■□□□ 1.38
SDC2-202ENST00000518385 ORAI2Q96SN7 254 aa23.69■■□□□ 1.38
SDC2-202ENST00000518385 ZRANB1Q9UGI0 708 aa23.69■■□□□ 1.38
SDC2-202ENST00000518385 IQSEC2Q5JU85 1478 aa23.69■■□□□ 1.38
SDC2-202ENST00000518385 COG3Q96JB2 828 aa23.69■■□□□ 1.38
SDC2-202ENST00000518385 MST1RQ04912 1400 aa23.69■■□□□ 1.38
SDC2-202ENST00000518385 AATKQ6ZMQ8 1374 aa23.68■■□□□ 1.38
SDC2-202ENST00000518385 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
SDC2-202ENST00000518385 U2AF1L5P0DN76 240 aaPredicted RBP23.65■■□□□ 1.38
SDC2-202ENST00000518385 U2AF1Q01081 240 aaKnown RBP eCLIP23.65■■□□□ 1.38
SDC2-202ENST00000518385 WDR63Q8IWG1 891 aa23.65■■□□□ 1.38
SDC2-202ENST00000518385 PSME1Q06323 249 aa23.65■■□□□ 1.38
SDC2-202ENST00000518385 WWC1Q8IX03 1113 aa23.65■■□□□ 1.38
SDC2-202ENST00000518385 TCP11L2Q8N4U5 519 aa23.65■■□□□ 1.38
SDC2-202ENST00000518385 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.65■■□□□ 1.38
SDC2-202ENST00000518385 DIAPH1O60610 1272 aaKnown RBP23.64■■□□□ 1.37
SDC2-202ENST00000518385 USP31Q70CQ4 1352 aa23.63■■□□□ 1.37
SDC2-202ENST00000518385 CENPQQ7L2Z9 268 aaPredicted RBP23.62■■□□□ 1.37
SDC2-202ENST00000518385 OVOS2A0A0J9YW53 1432 aa23.62■■□□□ 1.37
SDC2-202ENST00000518385 OVOS2Q6IE36 1432 aa23.62■■□□□ 1.37
SDC2-202ENST00000518385 KIF1AQ12756 1690 aa23.62■■□□□ 1.37
SDC2-202ENST00000518385 FOXO3O43524 673 aa23.61■■□□□ 1.37
SDC2-202ENST00000518385 POLKQ9UBT6 870 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms