RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 PLXNC1O60486 1568 aa9.21□□□□□ -0.93
MRPS28-203ENST00000518371 DNMT1P26358 1616 aaKnown RBP9.21□□□□□ -0.93
MRPS28-203ENST00000518371 HSPA2P54652 639 aa9.21□□□□□ -0.94
MRPS28-203ENST00000518371 FER1L4A9Z1Z3 1794 aa9.21□□□□□ -0.94
MRPS28-203ENST00000518371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.21□□□□□ -0.94
MRPS28-203ENST00000518371 DUOX2Q9NRD8 1548 aa9.21□□□□□ -0.94
MRPS28-203ENST00000518371 KANK1Q14678 1352 aa9.2□□□□□ -0.94
MRPS28-203ENST00000518371 PHF14O94880 888 aa9.19□□□□□ -0.94
MRPS28-203ENST00000518371 FBXO31Q5XUX0 539 aaPredicted RBP9.19□□□□□ -0.94
MRPS28-203ENST00000518371 TSR3Q9UJK0 312 aaKnown RBP9.19□□□□□ -0.94
MRPS28-203ENST00000518371 PTPRKQ15262 1439 aa9.19□□□□□ -0.94
MRPS28-203ENST00000518371 ERBINQ96RT1 1412 aa9.19□□□□□ -0.94
MRPS28-203ENST00000518371 RRBP1Q9P2E9 1410 aaKnown RBP9.18□□□□□ -0.94
MRPS28-203ENST00000518371 ADGRL2O95490 1459 aa9.17□□□□□ -0.94
MRPS28-203ENST00000518371 UHRF1BP1Q6BDS2 1440 aa9.17□□□□□ -0.94
MRPS28-203ENST00000518371 ANKRD50Q9ULJ7 1429 aa9.17□□□□□ -0.94
MRPS28-203ENST00000518371 ROCK1Q13464 1354 aa9.17□□□□□ -0.94
MRPS28-203ENST00000518371 ONECUT3O60422 494 aaPredicted RBP9.17□□□□□ -0.94
MRPS28-203ENST00000518371 TYW1BQ6NUM6 668 aa9.17□□□□□ -0.94
MRPS28-203ENST00000518371 DDX12PQ92771 950 aa9.17□□□□□ -0.94
MRPS28-203ENST00000518371 V9GY48 417 aaPredicted RBP9.17□□□□□ -0.94
MRPS28-203ENST00000518371 NPATQ14207 1427 aa9.16□□□□□ -0.94
MRPS28-203ENST00000518371 E2F4Q16254 413 aa9.16□□□□□ -0.94
MRPS28-203ENST00000518371 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.16□□□□□ -0.94
MRPS28-203ENST00000518371 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
MRPS28-203ENST00000518371 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
MRPS28-203ENST00000518371 ARIH1Q9Y4X5 557 aaPredicted RBP9.16□□□□□ -0.94
MRPS28-203ENST00000518371 CROCC2H7BZ55 1655 aa9.16□□□□□ -0.94
MRPS28-203ENST00000518371 CLTCQ00610 1675 aaKnown RBP9.16□□□□□ -0.94
MRPS28-203ENST00000518371 KDM5DQ9BY66 1539 aa9.15□□□□□ -0.94
MRPS28-203ENST00000518371 LMTK3Q96Q04 1460 aa9.15□□□□□ -0.94
MRPS28-203ENST00000518371 TNRQ92752 1358 aa9.14□□□□□ -0.95
MRPS28-203ENST00000518371 PDIA6Q15084 440 aa9.14□□□□□ -0.95
MRPS28-203ENST00000518371 FBXW7Q969H0 707 aa9.14□□□□□ -0.95
MRPS28-203ENST00000518371 SETD1BQ9UPS6 1966 aaKnown RBP9.13□□□□□ -0.95
MRPS28-203ENST00000518371 C3P01024 1663 aa9.13□□□□□ -0.95
MRPS28-203ENST00000518371 EIF2AK4Q9P2K8 1649 aaKnown RBP9.13□□□□□ -0.95
MRPS28-203ENST00000518371 FAM98CQ17RN3 349 aaKnown RBP9.13□□□□□ -0.95
MRPS28-203ENST00000518371 C6orf132Q5T0Z8 1188 aa9.13□□□□□ -0.95
MRPS28-203ENST00000518371 TRIM52Q96A61 297 aa9.13□□□□□ -0.95
MRPS28-203ENST00000518371 RBM33Q96EV2 1170 aaKnown RBP9.13□□□□□ -0.95
MRPS28-203ENST00000518371 LRCH3Q96II8 777 aa9.13□□□□□ -0.95
MRPS28-203ENST00000518371 EPAS1Q99814 870 aa9.13□□□□□ -0.95
MRPS28-203ENST00000518371 TSHZ2Q9NRE2 1034 aa9.13□□□□□ -0.95
MRPS28-203ENST00000518371 FAM135AQ9P2D6 1515 aa9.13□□□□□ -0.95
MRPS28-203ENST00000518371 PZPP20742 1482 aa9.13□□□□□ -0.95
MRPS28-203ENST00000518371 MROH2AA6NES4 1674 aa9.13□□□□□ -0.95
MRPS28-203ENST00000518371 NUP155O75694 1391 aa9.12□□□□□ -0.95
MRPS28-203ENST00000518371 ABCC3O15438 1527 aa9.12□□□□□ -0.95
MRPS28-203ENST00000518371 TJAP1Q5JTD0 557 aa9.12□□□□□ -0.95
MRPS28-203ENST00000518371 THEMISQ8N1K5 641 aaPredicted RBP9.12□□□□□ -0.95
MRPS28-203ENST00000518371 WDR70Q9NW82 654 aa9.12□□□□□ -0.95
MRPS28-203ENST00000518371 PDZRN3Q9UPQ7 1066 aa9.12□□□□□ -0.95
MRPS28-203ENST00000518371 RNF17Q9BXT8 1623 aaKnown RBP9.12□□□□□ -0.95
MRPS28-203ENST00000518371 SPDYE16A6NNV3 312 aaPredicted RBP9.11□□□□□ -0.95
MRPS28-203ENST00000518371 PRIM1P49642 420 aaKnown RBP9.11□□□□□ -0.95
MRPS28-203ENST00000518371 PPP1R18Q6NYC8 613 aa9.11□□□□□ -0.95
MRPS28-203ENST00000518371 ARHGAP31Q2M1Z3 1444 aa9.1□□□□□ -0.95
MRPS28-203ENST00000518371 MROH1Q8NDA8 1641 aa9.09□□□□□ -0.95
MRPS28-203ENST00000518371 NBR1Q14596 966 aa9.09□□□□□ -0.95
MRPS28-203ENST00000518371 TSR1Q2NL82 804 aaKnown RBP9.09□□□□□ -0.95
MRPS28-203ENST00000518371 PREX1Q8TCU6 1659 aa9.09□□□□□ -0.95
MRPS28-203ENST00000518371 PRDM15P57071 1507 aaPredicted RBP9.09□□□□□ -0.95
MRPS28-203ENST00000518371 A2ML1A8K2U0 1454 aa9.08□□□□□ -0.96
MRPS28-203ENST00000518371 NAIPQ13075 1403 aa9.08□□□□□ -0.96
MRPS28-203ENST00000518371 TRIM6-TRIM34B2RNG4 842 aa9.08□□□□□ -0.96
MRPS28-203ENST00000518371 PPP4CP60510 307 aa9.08□□□□□ -0.96
MRPS28-203ENST00000518371 IDI1Q13907 227 aa9.08□□□□□ -0.96
MRPS28-203ENST00000518371 ANKLE2Q86XL3 938 aa9.08□□□□□ -0.96
MRPS28-203ENST00000518371 ERVK-7P63135 1459 aa9.08□□□□□ -0.96
MRPS28-203ENST00000518371 ZC3H13Q5T200 1668 aaKnown RBP9.07□□□□□ -0.96
MRPS28-203ENST00000518371 EN1Q05925 392 aaPredicted RBP9.07□□□□□ -0.96
MRPS28-203ENST00000518371 SLC52A1Q9NWF4 448 aa9.07□□□□□ -0.96
MRPS28-203ENST00000518371 NLRP1Q9C000 1473 aa9.07□□□□□ -0.96
MRPS28-203ENST00000518371 HFM1A2PYH4 1435 aa9.06□□□□□ -0.96
MRPS28-203ENST00000518371 LMTK2Q8IWU2 1503 aa9.06□□□□□ -0.96
MRPS28-203ENST00000518371 CEP152O94986 1710 aa9.06□□□□□ -0.96
MRPS28-203ENST00000518371 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.06□□□□□ -0.96
MRPS28-203ENST00000518371 DEPDC5O75140 1603 aa9.05□□□□□ -0.96
MRPS28-203ENST00000518371 CAMSAP1Q5T5Y3 1602 aa9.05□□□□□ -0.96
MRPS28-203ENST00000518371 SPATA31D1Q6ZQQ2 1576 aa9.05□□□□□ -0.96
MRPS28-203ENST00000518371 VWDEQ8N2E2 1590 aa9.05□□□□□ -0.96
MRPS28-203ENST00000518371 CEP170BQ9Y4F5 1589 aaPredicted RBP9.05□□□□□ -0.96
MRPS28-203ENST00000518371 GRXCR2A6NFK2 248 aa9.05□□□□□ -0.96
MRPS28-203ENST00000518371 EID1Q9Y6B2 187 aa9.05□□□□□ -0.96
MRPS28-203ENST00000518371 UGGT1Q9NYU2 1555 aa9.04□□□□□ -0.96
MRPS28-203ENST00000518371 CFAP65Q6ZU64 1925 aaKnown RBP9.04□□□□□ -0.96
MRPS28-203ENST00000518371 MAP3K7O43318 606 aa9.04□□□□□ -0.96
MRPS28-203ENST00000518371 TXNDC2Q86VQ3 553 aa9.04□□□□□ -0.96
MRPS28-203ENST00000518371 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
MRPS28-203ENST00000518371 MYO3AQ8NEV4 1616 aa9.04□□□□□ -0.96
MRPS28-203ENST00000518371 ACIN1Q9UKV3 1341 aaKnown RBP9.04□□□□□ -0.96
MRPS28-203ENST00000518371 HDGFP51858 240 aaKnown RBP9.03□□□□□ -0.96
MRPS28-203ENST00000518371 MTRQ99707 1265 aa9.03□□□□□ -0.96
MRPS28-203ENST00000518371 PTPRTO14522 1441 aa9.03□□□□□ -0.96
MRPS28-203ENST00000518371 NOS1P29475 1434 aa9.03□□□□□ -0.96
MRPS28-203ENST00000518371 SETD5Q9C0A6 1442 aa9.03□□□□□ -0.96
MRPS28-203ENST00000518371 PLA2R1Q13018 1463 aa9.02□□□□□ -0.96
MRPS28-203ENST00000518371 RPRD2Q5VT52 1461 aaKnown RBP9.02□□□□□ -0.96
MRPS28-203ENST00000518371 EFCAB6Q5THR3 1501 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms