RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 TSC1Q92574 1164 aa10.66□□□□□ -0.7
CSMD1-203ENST00000518151 VARSP26640 1264 aaKnown RBP10.65□□□□□ -0.7
CSMD1-203ENST00000518151 QPCTQ16769 361 aa10.65□□□□□ -0.7
CSMD1-203ENST00000518151 LINC01559Q495D7 138 aa10.65□□□□□ -0.7
CSMD1-203ENST00000518151 DDRGK1Q96HY6 314 aa10.65□□□□□ -0.7
CSMD1-203ENST00000518151 WASF2Q9Y6W5 498 aa10.65□□□□□ -0.7
CSMD1-203ENST00000518151 SIAH2O43255 324 aa10.64□□□□□ -0.71
CSMD1-203ENST00000518151 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
CSMD1-203ENST00000518151 PLEKHG3A1L390 1219 aa10.63□□□□□ -0.71
CSMD1-203ENST00000518151 POTECB2RU33 542 aa10.63□□□□□ -0.71
CSMD1-203ENST00000518151 F12P00748 615 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-203ENST00000518151 HPS1Q92902 700 aa10.63□□□□□ -0.71
CSMD1-203ENST00000518151 ARMC2Q8NEN0 867 aa10.62□□□□□ -0.71
CSMD1-203ENST00000518151 POLR3EQ9NVU0 708 aa10.62□□□□□ -0.71
CSMD1-203ENST00000518151 MPNDQ8N594 471 aa10.61□□□□□ -0.71
CSMD1-203ENST00000518151 MAP10Q9P2G4 905 aa10.61□□□□□ -0.71
CSMD1-203ENST00000518151 DACH1Q9UI36 760 aa10.61□□□□□ -0.71
CSMD1-203ENST00000518151 C11orf95C9JLR9 678 aaPredicted RBP10.6□□□□□ -0.71
CSMD1-203ENST00000518151 SKIV2LQ15477 1246 aaKnown RBP10.6□□□□□ -0.71
CSMD1-203ENST00000518151 ZNF775Q96BV0 537 aaPredicted RBP10.6□□□□□ -0.71
CSMD1-203ENST00000518151 GPBP1L1Q9HC44 474 aaPredicted RBP10.6□□□□□ -0.71
CSMD1-203ENST00000518151 PER1O15534 1290 aaPredicted RBP10.59□□□□□ -0.71
CSMD1-203ENST00000518151 SH3D19Q5HYK7 790 aa10.59□□□□□ -0.71
CSMD1-203ENST00000518151 FAM174AQ8TBP5 190 aa10.59□□□□□ -0.71
CSMD1-203ENST00000518151 SENP2Q9HC62 589 aa10.59□□□□□ -0.71
CSMD1-203ENST00000518151 ATP13A2Q9NQ11 1180 aa10.59□□□□□ -0.71
CSMD1-203ENST00000518151 GMPR2Q9P2T1 348 aaKnown RBP10.59□□□□□ -0.71
CSMD1-203ENST00000518151 RTL5Q5HYW3 569 aaPredicted RBP10.58□□□□□ -0.72
CSMD1-203ENST00000518151 AGERQ15109 404 aa10.57□□□□□ -0.72
CSMD1-203ENST00000518151 NBPF14Q5TI25 921 aa10.57□□□□□ -0.72
CSMD1-203ENST00000518151 BPHLQ86WA6 291 aaPredicted RBP10.57□□□□□ -0.72
CSMD1-203ENST00000518151 KIFC2Q96AC6 838 aa10.56□□□□□ -0.72
CSMD1-203ENST00000518151 FAM117AQ9C073 453 aa10.56□□□□□ -0.72
CSMD1-203ENST00000518151 ATP1B4Q9UN42 357 aaPredicted RBP10.56□□□□□ -0.72
CSMD1-203ENST00000518151 TLL2Q9Y6L7 1015 aa10.56□□□□□ -0.72
CSMD1-203ENST00000518151 CAPN5O15484 640 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-203ENST00000518151 GPKOWQ92917 476 aaPredicted RBP eCLIP10.53□□□□□ -0.72
CSMD1-203ENST00000518151 FOXJ1Q92949 421 aa10.53□□□□□ -0.72
CSMD1-203ENST00000518151 TRIM47Q96LD4 638 aa10.53□□□□□ -0.72
CSMD1-203ENST00000518151 ADH1CP00326 375 aa10.52□□□□□ -0.73
CSMD1-203ENST00000518151 NNTQ13423 1086 aa10.52□□□□□ -0.73
CSMD1-203ENST00000518151 CDK15Q96Q40 435 aa10.51□□□□□ -0.73
CSMD1-203ENST00000518151 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.51□□□□□ -0.73
CSMD1-203ENST00000518151 PPP2R2DQ66LE6 453 aa10.5□□□□□ -0.73
CSMD1-203ENST00000518151 CTDSPL2Q05D32 466 aa10.49□□□□□ -0.73
CSMD1-203ENST00000518151 ARID5BQ14865 1188 aa10.49□□□□□ -0.73
CSMD1-203ENST00000518151 NR5A1Q13285 461 aa10.48□□□□□ -0.73
CSMD1-203ENST00000518151 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-203ENST00000518151 SH3RF1Q7Z6J0 888 aa10.47□□□□□ -0.73
CSMD1-203ENST00000518151 SNRPBP14678 240 aaKnown RBP10.46□□□□□ -0.73
CSMD1-203ENST00000518151 C4orf48Q5BLP8 95 aa10.46□□□□□ -0.73
CSMD1-203ENST00000518151 TREML4Q6UXN2 200 aa10.46□□□□□ -0.73
CSMD1-203ENST00000518151 SH3BP5LQ7L8J4 393 aa10.46□□□□□ -0.73
CSMD1-203ENST00000518151 C1QTNF2Q9BXJ5 285 aa10.46□□□□□ -0.73
CSMD1-203ENST00000518151 GOPCQ9HD26 462 aa10.46□□□□□ -0.73
CSMD1-203ENST00000518151 ZC3H4Q9UPT8 1303 aaKnown RBP10.45□□□□□ -0.74
CSMD1-203ENST00000518151 WDR4P57081 412 aaKnown RBP10.45□□□□□ -0.74
CSMD1-203ENST00000518151 NEUROD2Q15784 382 aa10.45□□□□□ -0.74
CSMD1-203ENST00000518151 PNMA1Q8ND90 353 aa10.45□□□□□ -0.74
CSMD1-203ENST00000518151 MAP4K5Q9Y4K4 846 aa10.45□□□□□ -0.74
CSMD1-203ENST00000518151 MAGEB6P1A0A0J9YX57 407 aa10.44□□□□□ -0.74
CSMD1-203ENST00000518151 AP1G2O75843 785 aa10.44□□□□□ -0.74
CSMD1-203ENST00000518151 BMP1P13497 986 aa10.44□□□□□ -0.74
CSMD1-203ENST00000518151 TRMT44Q8IYL2 757 aaKnown RBP10.44□□□□□ -0.74
CSMD1-203ENST00000518151 FKBPLQ9UIM3 349 aa10.44□□□□□ -0.74
CSMD1-203ENST00000518151 TIMP2P16035 220 aa10.43□□□□□ -0.74
CSMD1-203ENST00000518151 PDXDC2PQ6P474 469 aa10.43□□□□□ -0.74
CSMD1-203ENST00000518151 TRIM46Q7Z4K8 759 aa10.43□□□□□ -0.74
CSMD1-203ENST00000518151 LRRN4Q8WUT4 740 aa10.43□□□□□ -0.74
CSMD1-203ENST00000518151 PCMTD1Q96MG8 357 aaPredicted RBP10.43□□□□□ -0.74
CSMD1-203ENST00000518151 SCARF1Q14162 830 aa10.42□□□□□ -0.74
CSMD1-203ENST00000518151 VASH1Q7L8A9 365 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-203ENST00000518151 WFS1O76024 890 aa10.41□□□□□ -0.74
CSMD1-203ENST00000518151 GRM5P41594 1212 aa10.41□□□□□ -0.74
CSMD1-203ENST00000518151 ARHGAP9Q9BRR9 750 aa10.41□□□□□ -0.74
CSMD1-203ENST00000518151 KLF16Q9BXK1 252 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-203ENST00000518151 CARD14Q9BXL6 1004 aa10.41□□□□□ -0.74
CSMD1-203ENST00000518151 MRPL14Q6P1L8 145 aaKnown RBP10.4□□□□□ -0.74
CSMD1-203ENST00000518151 CDV3Q9UKY7 258 aaKnown RBP10.4□□□□□ -0.74
CSMD1-203ENST00000518151 ZIC2O95409 532 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-203ENST00000518151 FSHRP23945 695 aa10.39□□□□□ -0.75
CSMD1-203ENST00000518151 NR6A1Q15406 480 aa10.39□□□□□ -0.75
CSMD1-203ENST00000518151 FBXO31Q5XUX0 539 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-203ENST00000518151 GPSM3Q9Y4H4 160 aa10.39□□□□□ -0.75
CSMD1-203ENST00000518151 NR3C2P08235 984 aa10.38□□□□□ -0.75
CSMD1-203ENST00000518151 USP17L8P0C7I0 530 aa10.38□□□□□ -0.75
CSMD1-203ENST00000518151 RFC5P40937 340 aa10.38□□□□□ -0.75
CSMD1-203ENST00000518151 PTK2Q05397 1052 aa10.38□□□□□ -0.75
CSMD1-203ENST00000518151 ERFEQ4G0M1 354 aa10.38□□□□□ -0.75
CSMD1-203ENST00000518151 ZBTB33Q86T24 672 aa10.38□□□□□ -0.75
CSMD1-203ENST00000518151 ZFP42Q96MM3 310 aa10.38□□□□□ -0.75
CSMD1-203ENST00000518151 TERTO14746 1132 aaKnown RBP10.37□□□□□ -0.75
CSMD1-203ENST00000518151 UPP2O95045 317 aa10.37□□□□□ -0.75
CSMD1-203ENST00000518151 TMEM259Q4ZIN3 620 aa10.37□□□□□ -0.75
CSMD1-203ENST00000518151 ITPKCQ96DU7 683 aa10.37□□□□□ -0.75
CSMD1-203ENST00000518151 SLC10A4Q96EP9 437 aa10.37□□□□□ -0.75
CSMD1-203ENST00000518151 EMILIN1Q9Y6C2 1016 aa10.37□□□□□ -0.75
CSMD1-203ENST00000518151 NFX1Q12986 1120 aaKnown RBP10.36□□□□□ -0.75
CSMD1-203ENST00000518151 LCE2AQ5TA79 106 aaPredicted RBP10.36□□□□□ -0.75
CSMD1-203ENST00000518151 CCDC116Q8IYX3 515 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms