RNA–Protein interactions for RNA: ENST00000518080.2

HMBOX1-205, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-205ENST00000518080 MORC1Q86VD1 984 aa13.53□□□□□ -0.24
HMBOX1-205ENST00000518080 CABP1Q9NZU7 370 aa13.53□□□□□ -0.24
HMBOX1-205ENST00000518080 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
HMBOX1-205ENST00000518080 CCDC61Q9Y6R9 512 aa13.52□□□□□ -0.25
HMBOX1-205ENST00000518080 EDC4Q6P2E9 1401 aaKnown RBP13.52□□□□□ -0.25
HMBOX1-205ENST00000518080 NUTM2FA1L443 756 aa13.51□□□□□ -0.25
HMBOX1-205ENST00000518080 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
HMBOX1-205ENST00000518080 PPP2R1AP30153 589 aa13.5□□□□□ -0.25
HMBOX1-205ENST00000518080 PRR36Q9H6K5 1346 aa13.49□□□□□ -0.25
HMBOX1-205ENST00000518080 HNRNPUQ00839 825 aaKnown RBP eCLIP13.49□□□□□ -0.25
HMBOX1-205ENST00000518080 PROSER2Q86WR7 435 aaPredicted RBP13.49□□□□□ -0.25
HMBOX1-205ENST00000518080 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
HMBOX1-205ENST00000518080 KIF1AQ12756 1690 aa13.49□□□□□ -0.25
HMBOX1-205ENST00000518080 CPSF1Q10570 1443 aaKnown RBP13.48□□□□□ -0.25
HMBOX1-205ENST00000518080 TNNT2P45379 298 aaPredicted RBP13.47□□□□□ -0.25
HMBOX1-205ENST00000518080 WDR43Q15061 677 aaKnown RBP eCLIP13.47□□□□□ -0.25
HMBOX1-205ENST00000518080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.47□□□□□ -0.25
HMBOX1-205ENST00000518080 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
HMBOX1-205ENST00000518080 GGNBP2Q9H3C7 697 aa13.46□□□□□ -0.25
HMBOX1-205ENST00000518080 USP6P35125 1406 aa13.46□□□□□ -0.26
HMBOX1-205ENST00000518080 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.26
HMBOX1-205ENST00000518080 ACEP12821 1306 aa13.45□□□□□ -0.26
HMBOX1-205ENST00000518080 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
HMBOX1-205ENST00000518080 NGDNQ8NEJ9 315 aaKnown RBP13.45□□□□□ -0.26
HMBOX1-205ENST00000518080 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
HMBOX1-205ENST00000518080 CFAP53Q96M91 514 aa13.45□□□□□ -0.26
HMBOX1-205ENST00000518080 XIRP1Q702N8 1843 aaKnown RBP13.45□□□□□ -0.26
HMBOX1-205ENST00000518080 SHPRHQ149N8 1683 aa13.44□□□□□ -0.26
HMBOX1-205ENST00000518080 PLEKHG3A1L390 1219 aa13.43□□□□□ -0.26
HMBOX1-205ENST00000518080 DCCP43146 1447 aa13.43□□□□□ -0.26
HMBOX1-205ENST00000518080 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
HMBOX1-205ENST00000518080 TMEM94Q12767 1356 aa13.43□□□□□ -0.26
HMBOX1-205ENST00000518080 NCOA3Q9Y6Q9 1424 aa13.42□□□□□ -0.26
HMBOX1-205ENST00000518080 PNISRQ8TF01 805 aaKnown RBP13.42□□□□□ -0.26
HMBOX1-205ENST00000518080 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
HMBOX1-205ENST00000518080 COG3Q96JB2 828 aa13.42□□□□□ -0.26
HMBOX1-205ENST00000518080 PIK3C2AO00443 1686 aa13.42□□□□□ -0.26
HMBOX1-205ENST00000518080 POLR3AO14802 1390 aaPredicted RBP13.42□□□□□ -0.26
HMBOX1-205ENST00000518080 MSH6P52701 1360 aa13.42□□□□□ -0.26
HMBOX1-205ENST00000518080 FYB1O15117 783 aa13.41□□□□□ -0.26
HMBOX1-205ENST00000518080 TTC21AQ8NDW8 1320 aa13.4□□□□□ -0.26
HMBOX1-205ENST00000518080 ATF3P18847 181 aa13.4□□□□□ -0.26
HMBOX1-205ENST00000518080 NME9Q86XW9 330 aa13.4□□□□□ -0.26
HMBOX1-205ENST00000518080 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
HMBOX1-205ENST00000518080 USP54Q70EL1 1684 aa13.4□□□□□ -0.26
HMBOX1-205ENST00000518080 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
HMBOX1-205ENST00000518080 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
HMBOX1-205ENST00000518080 C19orf44Q9H6X5 657 aa13.39□□□□□ -0.27
HMBOX1-205ENST00000518080 INSRP06213 1382 aa13.38□□□□□ -0.27
HMBOX1-205ENST00000518080 ESCO1Q5FWF5 840 aa13.38□□□□□ -0.27
HMBOX1-205ENST00000518080 ZBED9Q6R2W3 1325 aa13.38□□□□□ -0.27
HMBOX1-205ENST00000518080 C1orf167Q5SNV9 1468 aa13.37□□□□□ -0.27
HMBOX1-205ENST00000518080 LRRC7Q96NW7 1537 aa13.37□□□□□ -0.27
HMBOX1-205ENST00000518080 OVOS2A0A0J9YW53 1432 aa13.37□□□□□ -0.27
HMBOX1-205ENST00000518080 OVOS2Q6IE36 1432 aa13.37□□□□□ -0.27
HMBOX1-205ENST00000518080 ZNF335Q9H4Z2 1342 aaPredicted RBP13.37□□□□□ -0.27
HMBOX1-205ENST00000518080 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
HMBOX1-205ENST00000518080 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
HMBOX1-205ENST00000518080 MTHFSP49914 203 aa13.36□□□□□ -0.27
HMBOX1-205ENST00000518080 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
HMBOX1-205ENST00000518080 CADPS2Q86UW7 1296 aa13.35□□□□□ -0.27
HMBOX1-205ENST00000518080 MST1RQ04912 1400 aa13.35□□□□□ -0.27
HMBOX1-205ENST00000518080 TRPM3Q9HCF6 1732 aaPredicted RBP13.35□□□□□ -0.27
HMBOX1-205ENST00000518080 LTN1O94822 1766 aa13.35□□□□□ -0.27
HMBOX1-205ENST00000518080 SSH2Q76I76 1423 aa13.34□□□□□ -0.27
HMBOX1-205ENST00000518080 SMG6Q86US8 1419 aaKnown RBP13.34□□□□□ -0.27
HMBOX1-205ENST00000518080 PPM1GO15355 546 aaPredicted RBP13.34□□□□□ -0.27
HMBOX1-205ENST00000518080 PSME1Q06323 249 aa13.34□□□□□ -0.27
HMBOX1-205ENST00000518080 NUDCQ9Y266 331 aa13.34□□□□□ -0.27
HMBOX1-205ENST00000518080 AATKQ6ZMQ8 1374 aa13.33□□□□□ -0.27
HMBOX1-205ENST00000518080 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
HMBOX1-205ENST00000518080 COL3A1P02461 1466 aaPredicted RBP13.33□□□□□ -0.28
HMBOX1-205ENST00000518080 SOX12O15370 315 aa13.31□□□□□ -0.28
HMBOX1-205ENST00000518080 NLRP6P59044 892 aa13.31□□□□□ -0.28
HMBOX1-205ENST00000518080 ADAMTS8Q9UP79 889 aa13.31□□□□□ -0.28
HMBOX1-205ENST00000518080 USP31Q70CQ4 1352 aa13.31□□□□□ -0.28
HMBOX1-205ENST00000518080 ALS2Q96Q42 1657 aa13.31□□□□□ -0.28
HMBOX1-205ENST00000518080 U2SURPO15042 1029 aaKnown RBP13.3□□□□□ -0.28
HMBOX1-205ENST00000518080 DIAPH1O60610 1272 aaKnown RBP13.3□□□□□ -0.28
HMBOX1-205ENST00000518080 ABTB2Q8N961 1025 aa13.3□□□□□ -0.28
HMBOX1-205ENST00000518080 ORAI2Q96SN7 254 aa13.3□□□□□ -0.28
HMBOX1-205ENST00000518080 PEAK1Q9H792 1746 aa13.3□□□□□ -0.28
HMBOX1-205ENST00000518080 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
HMBOX1-205ENST00000518080 U2AF1L5P0DN76 240 aaPredicted RBP13.29□□□□□ -0.28
HMBOX1-205ENST00000518080 U2AF1Q01081 240 aaKnown RBP eCLIP13.29□□□□□ -0.28
HMBOX1-205ENST00000518080 CCDC146Q8IYE0 955 aa13.29□□□□□ -0.28
HMBOX1-205ENST00000518080 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
HMBOX1-205ENST00000518080 EMILIN1Q9Y6C2 1016 aa13.29□□□□□ -0.28
HMBOX1-205ENST00000518080 RRS1Q15050 365 aaKnown RBP13.28□□□□□ -0.28
HMBOX1-205ENST00000518080 FOXD4L1Q9NU39 408 aa13.28□□□□□ -0.28
HMBOX1-205ENST00000518080 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
HMBOX1-205ENST00000518080 SALL2Q9Y467 1007 aaPredicted RBP13.28□□□□□ -0.28
HMBOX1-205ENST00000518080 FOXO3O43524 673 aa13.27□□□□□ -0.29
HMBOX1-205ENST00000518080 NEFMP07197 916 aa13.27□□□□□ -0.29
HMBOX1-205ENST00000518080 XPCQ01831 940 aaPredicted RBP13.27□□□□□ -0.29
HMBOX1-205ENST00000518080 NUTM2GQ5VZR2 741 aa13.27□□□□□ -0.29
HMBOX1-205ENST00000518080 LMOD2Q6P5Q4 547 aa13.27□□□□□ -0.29
HMBOX1-205ENST00000518080 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
HMBOX1-205ENST00000518080 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
HMBOX1-205ENST00000518080 NPHP3Q7Z494 1330 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms